RNA–Protein interactions for RNA: ENST00000323434.12

RPH3AL-201, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 1 (best) BASIC

Gene RPH3AL, Length 2,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-201ENST00000323434 KDM5CP41229 1560 aa20.79■□□□□ 0.92
RPH3AL-201ENST00000323434 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
RPH3AL-201ENST00000323434 DHX29Q7Z478 1369 aaKnown RBP20.78■□□□□ 0.92
RPH3AL-201ENST00000323434 RALGAPBQ86X10 1494 aa20.78■□□□□ 0.92
RPH3AL-201ENST00000323434 B4GALNT3Q6L9W6 998 aa20.77■□□□□ 0.91
RPH3AL-201ENST00000323434 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
RPH3AL-201ENST00000323434 ARHGEF12Q9NZN5 1544 aa20.75■□□□□ 0.91
RPH3AL-201ENST00000323434 ROCK2O75116 1388 aaKnown RBP20.75■□□□□ 0.91
RPH3AL-201ENST00000323434 SENP3-EIF4A1A0A087X0R7 540 aa20.75■□□□□ 0.91
RPH3AL-201ENST00000323434 ABCC2Q92887 1545 aa20.75■□□□□ 0.91
RPH3AL-201ENST00000323434 CCDC144AA2RUR9 1427 aa20.74■□□□□ 0.91
RPH3AL-201ENST00000323434 ARID4BQ4LE39 1312 aaPredicted RBP20.72■□□□□ 0.91
RPH3AL-201ENST00000323434 PLEKHH2Q8IVE3 1493 aa20.72■□□□□ 0.91
RPH3AL-201ENST00000323434 ERICH6Q7L0X2 663 aa20.7■□□□□ 0.9
RPH3AL-201ENST00000323434 NBPF1Q3BBV0 1214 aa20.69■□□□□ 0.9
RPH3AL-201ENST00000323434 EFCAB2Q5VUJ9 269 aa20.68■□□□□ 0.9
RPH3AL-201ENST00000323434 MYO5CQ9NQX4 1742 aa20.67■□□□□ 0.9
RPH3AL-201ENST00000323434 TMC1Q8TDI8 760 aa20.66■□□□□ 0.9
RPH3AL-201ENST00000323434 PLA2R1Q13018 1463 aa20.66■□□□□ 0.9
RPH3AL-201ENST00000323434 SMG6Q86US8 1419 aaKnown RBP20.65■□□□□ 0.9
RPH3AL-201ENST00000323434 PLCH2O75038 1416 aa20.64■□□□□ 0.89
RPH3AL-201ENST00000323434 PRAG1Q86YV5 1406 aa20.64■□□□□ 0.89
RPH3AL-201ENST00000323434 MAST1Q9Y2H9 1570 aa20.64■□□□□ 0.89
RPH3AL-201ENST00000323434 UNC13BO14795 1591 aa20.61■□□□□ 0.89
RPH3AL-201ENST00000323434 AFAP1Q8N556 730 aa20.61■□□□□ 0.89
RPH3AL-201ENST00000323434 ZCCHC11Q5TAX3 1644 aaKnown RBP20.61■□□□□ 0.89
RPH3AL-201ENST00000323434 TRAPPC8Q9Y2L5 1435 aa20.6■□□□□ 0.89
RPH3AL-201ENST00000323434 A2MP01023 1474 aa20.6■□□□□ 0.89
RPH3AL-201ENST00000323434 PNISRQ8TF01 805 aaKnown RBP20.59■□□□□ 0.89
RPH3AL-201ENST00000323434 DUOX2Q9NRD8 1548 aa20.59■□□□□ 0.89
RPH3AL-201ENST00000323434 PLXNC1O60486 1568 aa20.58■□□□□ 0.89
RPH3AL-201ENST00000323434 RNF123Q5XPI4 1314 aa20.58■□□□□ 0.89
RPH3AL-201ENST00000323434 NUDCQ9Y266 331 aa20.58■□□□□ 0.88
RPH3AL-201ENST00000323434 SPAG9O60271 1321 aaKnown RBP20.57■□□□□ 0.88
RPH3AL-201ENST00000323434 MYT1LQ9UL68 1186 aa20.56■□□□□ 0.88
RPH3AL-201ENST00000323434 CLASP1Q7Z460 1538 aa20.56■□□□□ 0.88
RPH3AL-201ENST00000323434 ERBINQ96RT1 1412 aa20.55■□□□□ 0.88
RPH3AL-201ENST00000323434 IQGAP3Q86VI3 1631 aa20.55■□□□□ 0.88
RPH3AL-201ENST00000323434 TRPM1Q7Z4N2 1603 aa20.55■□□□□ 0.88
RPH3AL-201ENST00000323434 MYBBP1AQ9BQG0 1328 aaKnown RBP20.54■□□□□ 0.88
RPH3AL-201ENST00000323434 RALBP1Q15311 655 aa20.54■□□□□ 0.88
RPH3AL-201ENST00000323434 UHRF1BP1LA0JNW5 1464 aa20.53■□□□□ 0.88
RPH3AL-201ENST00000323434 ABCC1P33527 1531 aa20.52■□□□□ 0.88
RPH3AL-201ENST00000323434 DISP3Q9P2K9 1392 aa20.5■□□□□ 0.87
RPH3AL-201ENST00000323434 CC2D1BQ5T0F9 858 aaKnown RBP20.49■□□□□ 0.87
RPH3AL-201ENST00000323434 TESK2Q96S53 571 aa20.49■□□□□ 0.87
RPH3AL-201ENST00000323434 SALL2Q9Y467 1007 aaPredicted RBP20.49■□□□□ 0.87
RPH3AL-201ENST00000323434 GPRASP1Q5JY77 1395 aa20.49■□□□□ 0.87
RPH3AL-201ENST00000323434 NOP58Q9Y2X3 529 aaKnown RBP20.49■□□□□ 0.87
RPH3AL-201ENST00000323434 MAGI2Q86UL8 1455 aa20.48■□□□□ 0.87
RPH3AL-201ENST00000323434 BRD4O60885 1362 aaPredicted RBP20.48■□□□□ 0.87
RPH3AL-201ENST00000323434 KTN1Q86UP2 1357 aaKnown RBP20.48■□□□□ 0.87
RPH3AL-201ENST00000323434 PAK3O75914 559 aaPredicted RBP20.48■□□□□ 0.87
RPH3AL-201ENST00000323434 CCDC136Q96JN2 1154 aa20.47■□□□□ 0.87
RPH3AL-201ENST00000323434 PER1O15534 1290 aaPredicted RBP20.46■□□□□ 0.87
RPH3AL-201ENST00000323434 PANK3Q9H999 370 aa20.46■□□□□ 0.87
RPH3AL-201ENST00000323434 ATP10AO60312 1499 aa20.45■□□□□ 0.86
RPH3AL-201ENST00000323434 TMF1P82094 1093 aa20.45■□□□□ 0.86
RPH3AL-201ENST00000323434 NLRP13Q86W25 1043 aa20.45■□□□□ 0.86
RPH3AL-201ENST00000323434 KIF3BO15066 747 aa20.43■□□□□ 0.86
RPH3AL-201ENST00000323434 E9PCH4 1651 aa20.43■□□□□ 0.86
RPH3AL-201ENST00000323434 COL17A1Q9UMD9 1497 aaPredicted RBP20.43■□□□□ 0.86
RPH3AL-201ENST00000323434 LRPPRCP42704 1394 aaKnown RBP20.43■□□□□ 0.86
RPH3AL-201ENST00000323434 PRDM15P57071 1507 aaPredicted RBP20.43■□□□□ 0.86
RPH3AL-201ENST00000323434 DEKP35659 375 aaKnown RBP20.42■□□□□ 0.86
RPH3AL-201ENST00000323434 WDR7Q9Y4E6 1490 aa20.41■□□□□ 0.86
RPH3AL-201ENST00000323434 PARD3Q8TEW0 1356 aa20.41■□□□□ 0.86
RPH3AL-201ENST00000323434 FANCAO15360 1455 aa20.41■□□□□ 0.86
RPH3AL-201ENST00000323434 ZFYVE16Q7Z3T8 1539 aa20.4■□□□□ 0.86
RPH3AL-201ENST00000323434 RTEL1-TNFRSF6BF6WH68 1400 aa20.4■□□□□ 0.86
RPH3AL-201ENST00000323434 EIF2AK4Q9P2K8 1649 aaKnown RBP20.4■□□□□ 0.86
RPH3AL-201ENST00000323434 SCAPERQ9BY12 1400 aa20.4■□□□□ 0.86
RPH3AL-201ENST00000323434 NBR1Q14596 966 aa20.37■□□□□ 0.85
RPH3AL-201ENST00000323434 KANK1Q14678 1352 aa20.36■□□□□ 0.85
RPH3AL-201ENST00000323434 IPO9Q96P70 1041 aaKnown RBP20.35■□□□□ 0.85
RPH3AL-201ENST00000323434 LAMC1P11047 1609 aa20.35■□□□□ 0.85
RPH3AL-201ENST00000323434 ADGRL1O94910 1474 aa20.35■□□□□ 0.85
RPH3AL-201ENST00000323434 ARAP3Q8WWN8 1544 aa20.34■□□□□ 0.85
RPH3AL-201ENST00000323434 ATP7AQ04656 1500 aa20.33■□□□□ 0.85
RPH3AL-201ENST00000323434 ANP32AP39687 249 aaKnown RBP20.33■□□□□ 0.84
RPH3AL-201ENST00000323434 TRPM2O94759 1503 aa20.32■□□□□ 0.84
RPH3AL-201ENST00000323434 WASHC2CQ9Y4E1 1318 aa20.32■□□□□ 0.84
RPH3AL-201ENST00000323434 ASXL2Q76L83 1435 aa20.31■□□□□ 0.84
RPH3AL-201ENST00000323434 PTPRTO14522 1441 aa20.31■□□□□ 0.84
RPH3AL-201ENST00000323434 RRP1P56182 461 aaKnown RBP20.31■□□□□ 0.84
RPH3AL-201ENST00000323434 CLTCL1P53675 1640 aa20.3■□□□□ 0.84
RPH3AL-201ENST00000323434 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
RPH3AL-201ENST00000323434 MADDQ8WXG6 1647 aa20.29■□□□□ 0.84
RPH3AL-201ENST00000323434 CDCA7LQ96GN5 454 aa20.29■□□□□ 0.84
RPH3AL-201ENST00000323434 ABCA9Q8IUA7 1624 aa20.28■□□□□ 0.84
RPH3AL-201ENST00000323434 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
RPH3AL-201ENST00000323434 RNF17Q9BXT8 1623 aaKnown RBP20.28■□□□□ 0.84
RPH3AL-201ENST00000323434 SPHKAPQ2M3C7 1700 aa20.28■□□□□ 0.84
RPH3AL-201ENST00000323434 NPM1P06748 294 aaKnown RBP eCLIP20.27■□□□□ 0.84
RPH3AL-201ENST00000323434 CFAP70Q5T0N1 1121 aa20.26■□□□□ 0.83
RPH3AL-201ENST00000323434 INO80Q9ULG1 1556 aaPredicted RBP20.26■□□□□ 0.83
RPH3AL-201ENST00000323434 RCAN3Q9UKA8 241 aa20.26■□□□□ 0.83
RPH3AL-201ENST00000323434 DEPDC5O75140 1603 aa20.25■□□□□ 0.83
RPH3AL-201ENST00000323434 SCAF11Q99590 1463 aaKnown RBP20.25■□□□□ 0.83
RPH3AL-201ENST00000323434 ZBTB47Q9UFB7 747 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms