RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
GCFC2-201ENST00000321027 SLC4A3P48751 1232 aa19.73■□□□□ 0.75
GCFC2-201ENST00000321027 BIVM-ERCC5R4GMW8 1640 aa19.72■□□□□ 0.75
GCFC2-201ENST00000321027 CLUAP1Q96AJ1 413 aa19.71■□□□□ 0.75
GCFC2-201ENST00000321027 AFAP1Q8N556 730 aa19.69■□□□□ 0.74
GCFC2-201ENST00000321027 CRBNQ96SW2 442 aa19.69■□□□□ 0.74
GCFC2-201ENST00000321027 TRAK1Q9UPV9 953 aa19.69■□□□□ 0.74
GCFC2-201ENST00000321027 U2AF1L5P0DN76 240 aaPredicted RBP19.69■□□□□ 0.74
GCFC2-201ENST00000321027 U2AF1Q01081 240 aaKnown RBP eCLIP19.69■□□□□ 0.74
GCFC2-201ENST00000321027 EHBP1L1Q8N3D4 1523 aa19.69■□□□□ 0.74
GCFC2-201ENST00000321027 HFM1A2PYH4 1435 aa19.69■□□□□ 0.74
GCFC2-201ENST00000321027 KIAA0586Q9BVV6 1533 aa19.68■□□□□ 0.74
GCFC2-201ENST00000321027 TROQ12816 1431 aaPredicted RBP19.68■□□□□ 0.74
GCFC2-201ENST00000321027 PCF11O94913 1555 aaKnown RBP19.67■□□□□ 0.74
GCFC2-201ENST00000321027 CDK13Q14004 1512 aaKnown RBP19.67■□□□□ 0.74
GCFC2-201ENST00000321027 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
GCFC2-201ENST00000321027 MIA2Q96PC5 1412 aa19.67■□□□□ 0.74
GCFC2-201ENST00000321027 SOX12O15370 315 aa19.67■□□□□ 0.74
GCFC2-201ENST00000321027 HDGFP51858 240 aaKnown RBP19.67■□□□□ 0.74
GCFC2-201ENST00000321027 EIF3AQ14152 1382 aaKnown RBP19.65■□□□□ 0.74
GCFC2-201ENST00000321027 PTMAP06454 111 aaKnown RBP19.65■□□□□ 0.74
GCFC2-201ENST00000321027 EPRSP07814 1512 aaKnown RBP19.65■□□□□ 0.74
GCFC2-201ENST00000321027 RRP7AQ9Y3A4 280 aaKnown RBP19.64■□□□□ 0.73
GCFC2-201ENST00000321027 MS4A1P11836 297 aa19.62■□□□□ 0.73
GCFC2-201ENST00000321027 LMOD2Q6P5Q4 547 aa19.62■□□□□ 0.73
GCFC2-201ENST00000321027 HSP90AB1P08238 724 aaKnown RBP19.61■□□□□ 0.73
GCFC2-201ENST00000321027 NAIPQ13075 1403 aa19.61■□□□□ 0.73
GCFC2-201ENST00000321027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.61■□□□□ 0.73
GCFC2-201ENST00000321027 IQGAP2Q13576 1575 aa19.6■□□□□ 0.73
GCFC2-201ENST00000321027 CDCA7LQ96GN5 454 aa19.6■□□□□ 0.73
GCFC2-201ENST00000321027 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
GCFC2-201ENST00000321027 HDGFL2Q7Z4V5 671 aaPredicted RBP19.6■□□□□ 0.73
GCFC2-201ENST00000321027 HECW1Q76N89 1606 aa19.6■□□□□ 0.73
GCFC2-201ENST00000321027 APAF1O14727 1248 aa19.6■□□□□ 0.73
GCFC2-201ENST00000321027 GZF1Q9H116 711 aaPredicted RBP19.6■□□□□ 0.73
GCFC2-201ENST00000321027 C11orf95C9JLR9 678 aaPredicted RBP19.59■□□□□ 0.73
GCFC2-201ENST00000321027 CUL7Q14999 1698 aa19.59■□□□□ 0.73
GCFC2-201ENST00000321027 ZNF608Q9ULD9 1512 aaPredicted RBP19.59■□□□□ 0.73
GCFC2-201ENST00000321027 DNTTIP2Q5QJE6 756 aaKnown RBP19.58■□□□□ 0.73
GCFC2-201ENST00000321027 AKNAQ7Z591 1439 aa19.58■□□□□ 0.73
GCFC2-201ENST00000321027 CENPJQ9HC77 1338 aaPredicted RBP19.58■□□□□ 0.73
GCFC2-201ENST00000321027 HSCBQ8IWL3 235 aa19.58■□□□□ 0.72
GCFC2-201ENST00000321027 ARHGAP5Q13017 1502 aa19.57■□□□□ 0.72
GCFC2-201ENST00000321027 CASC1Q6TDU7 716 aa19.57■□□□□ 0.72
GCFC2-201ENST00000321027 ITPRIPQ8IWB1 547 aa19.57■□□□□ 0.72
GCFC2-201ENST00000321027 PLCB2Q00722 1185 aa19.57■□□□□ 0.72
GCFC2-201ENST00000321027 NAP1L5Q96NT1 182 aaPredicted RBP19.57■□□□□ 0.72
GCFC2-201ENST00000321027 C9orf84Q5VXU9 1444 aa19.56■□□□□ 0.72
GCFC2-201ENST00000321027 RWDD1Q9H446 243 aaPredicted RBP19.56■□□□□ 0.72
GCFC2-201ENST00000321027 DAPK1P53355 1430 aa19.55■□□□□ 0.72
GCFC2-201ENST00000321027 PAK3O75914 559 aaPredicted RBP19.55■□□□□ 0.72
GCFC2-201ENST00000321027 CENPQQ7L2Z9 268 aaPredicted RBP19.55■□□□□ 0.72
GCFC2-201ENST00000321027 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.55■□□□□ 0.72
GCFC2-201ENST00000321027 PLB1Q6P1J6 1458 aa19.54■□□□□ 0.72
GCFC2-201ENST00000321027 SUPT6HQ7KZ85 1726 aaKnown RBP19.54■□□□□ 0.72
GCFC2-201ENST00000321027 MAP3K1Q13233 1512 aa19.54■□□□□ 0.72
GCFC2-201ENST00000321027 PNNQ9H307 717 aaKnown RBP19.54■□□□□ 0.72
GCFC2-201ENST00000321027 COG6Q9Y2V7 657 aa19.54■□□□□ 0.72
GCFC2-201ENST00000321027 MFAP1P55081 439 aaKnown RBP19.53■□□□□ 0.72
GCFC2-201ENST00000321027 SMC4Q9NTJ3 1288 aa19.53■□□□□ 0.72
GCFC2-201ENST00000321027 FAM161AQ3B820 660 aa19.52■□□□□ 0.72
GCFC2-201ENST00000321027 APBB1O00213 710 aa19.52■□□□□ 0.72
GCFC2-201ENST00000321027 NBPF1Q3BBV0 1214 aa19.52■□□□□ 0.72
GCFC2-201ENST00000321027 VGFO15240 615 aaPredicted RBP19.52■□□□□ 0.72
GCFC2-201ENST00000321027 PNISRQ8TF01 805 aaKnown RBP19.52■□□□□ 0.72
GCFC2-201ENST00000321027 TAOK2Q9UL54 1235 aa19.52■□□□□ 0.72
GCFC2-201ENST00000321027 GRIN2AQ12879 1464 aa19.52■□□□□ 0.71
GCFC2-201ENST00000321027 TERF2IPQ9NYB0 399 aa19.5■□□□□ 0.71
GCFC2-201ENST00000321027 ZRSR1Q15695 479 aaKnown RBP19.5■□□□□ 0.71
GCFC2-201ENST00000321027 KIAA1107Q9UPP5 1409 aa19.49■□□□□ 0.71
GCFC2-201ENST00000321027 PMFBP1Q8TBY8 1022 aa19.49■□□□□ 0.71
GCFC2-201ENST00000321027 ADAMTS8Q9UP79 889 aa19.49■□□□□ 0.71
GCFC2-201ENST00000321027 MSH5O43196 834 aa19.49■□□□□ 0.71
GCFC2-201ENST00000321027 FAM69CQ0P6D2 419 aa19.49■□□□□ 0.71
GCFC2-201ENST00000321027 IPO8O15397 1037 aaKnown RBP19.47■□□□□ 0.71
GCFC2-201ENST00000321027 USP35Q9P2H5 1018 aa19.47■□□□□ 0.71
GCFC2-201ENST00000321027 CHMP4BQ9H444 224 aaKnown RBP19.47■□□□□ 0.71
GCFC2-201ENST00000321027 NUTM2FA1L443 756 aa19.47■□□□□ 0.71
GCFC2-201ENST00000321027 HAP1P54257 671 aaPredicted RBP19.47■□□□□ 0.71
GCFC2-201ENST00000321027 L1TD1Q5T7N2 865 aaKnown RBP19.46■□□□□ 0.71
GCFC2-201ENST00000321027 BRD4O60885 1362 aaPredicted RBP19.46■□□□□ 0.71
GCFC2-201ENST00000321027 E9PSI1 815 aa19.45■□□□□ 0.7
GCFC2-201ENST00000321027 OS9Q13438 667 aaPredicted RBP19.44■□□□□ 0.7
GCFC2-201ENST00000321027 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.44■□□□□ 0.71e-6■■□□□ 13.3
GCFC2-201ENST00000321027 ARHGEF11O15085 1522 aa19.44■□□□□ 0.7
GCFC2-201ENST00000321027 MAGI1Q96QZ7 1491 aaPredicted RBP19.43■□□□□ 0.7
GCFC2-201ENST00000321027 MINK1Q8N4C8 1332 aaPredicted RBP19.43■□□□□ 0.7
GCFC2-201ENST00000321027 KCNJ4P48050 445 aa19.43■□□□□ 0.7
GCFC2-201ENST00000321027 ABCC5O15440 1437 aa19.42■□□□□ 0.7
GCFC2-201ENST00000321027 GSE1Q14687 1217 aa19.42■□□□□ 0.7
GCFC2-201ENST00000321027 CFAP70Q5T0N1 1121 aa19.42■□□□□ 0.7
GCFC2-201ENST00000321027 ROCK1Q13464 1354 aa19.42■□□□□ 0.7
GCFC2-201ENST00000321027 FGD1P98174 961 aa19.42■□□□□ 0.7
GCFC2-201ENST00000321027 CDK11BP21127 795 aaKnown RBP19.41■□□□□ 0.7
GCFC2-201ENST00000321027 SCAPERQ9BY12 1400 aa19.41■□□□□ 0.7
GCFC2-201ENST00000321027 TMEM132EQ6IEE7 984 aa19.41■□□□□ 0.7
GCFC2-201ENST00000321027 EVC2Q86UK5 1308 aa19.4■□□□□ 0.7
GCFC2-201ENST00000321027 PTPN23Q9H3S7 1636 aa19.4■□□□□ 0.7
GCFC2-201ENST00000321027 STAC3Q96MF2 364 aa19.39■□□□□ 0.7
GCFC2-201ENST00000321027 FOXD4L1Q9NU39 408 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms