RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 RRBP1Q9P2E9 1410 aaKnown RBP20.99■□□□□ 0.95
CLIP4-201ENST00000320081 MINK1Q8N4C8 1332 aaPredicted RBP20.98■□□□□ 0.95
CLIP4-201ENST00000320081 NAP1L5Q96NT1 182 aaPredicted RBP20.98■□□□□ 0.95
CLIP4-201ENST00000320081 LTV1Q96GA3 475 aaPredicted RBP20.98■□□□□ 0.95
CLIP4-201ENST00000320081 HDGFL2Q7Z4V5 671 aaPredicted RBP20.98■□□□□ 0.95
CLIP4-201ENST00000320081 SKAP1Q86WV1 359 aa20.97■□□□□ 0.95
CLIP4-201ENST00000320081 HSCBQ8IWL3 235 aa20.97■□□□□ 0.95
CLIP4-201ENST00000320081 SLC4A10Q6U841 1118 aa20.96■□□□□ 0.95
CLIP4-201ENST00000320081 ADAMTS8Q9UP79 889 aa20.96■□□□□ 0.95
CLIP4-201ENST00000320081 NCAPD3P42695 1498 aa20.96■□□□□ 0.95
CLIP4-201ENST00000320081 PTMAP06454 111 aaKnown RBP20.96■□□□□ 0.95
CLIP4-201ENST00000320081 WDR97A6NE52 1622 aa20.95■□□□□ 0.94
CLIP4-201ENST00000320081 NOL8Q76FK4 1167 aaKnown RBP20.95■□□□□ 0.94
CLIP4-201ENST00000320081 CUX1P39880 1505 aa20.93■□□□□ 0.94
CLIP4-201ENST00000320081 AKNAQ7Z591 1439 aa20.93■□□□□ 0.94
CLIP4-201ENST00000320081 PDE3BQ13370 1112 aa20.92■□□□□ 0.94
CLIP4-201ENST00000320081 RWDD1Q9H446 243 aaPredicted RBP20.92■□□□□ 0.94
CLIP4-201ENST00000320081 NAP1L2Q9ULW6 460 aaPredicted RBP20.92■□□□□ 0.94
CLIP4-201ENST00000320081 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
CLIP4-201ENST00000320081 CASC1Q6TDU7 716 aa20.91■□□□□ 0.94
CLIP4-201ENST00000320081 KCNJ4P48050 445 aa20.91■□□□□ 0.94
CLIP4-201ENST00000320081 CFAP70Q5T0N1 1121 aa20.9■□□□□ 0.94
CLIP4-201ENST00000320081 ANKRD50Q9ULJ7 1429 aa20.9■□□□□ 0.94
CLIP4-201ENST00000320081 MS4A1P11836 297 aa20.89■□□□□ 0.94
CLIP4-201ENST00000320081 DNTTIP2Q5QJE6 756 aaKnown RBP20.89■□□□□ 0.94
CLIP4-201ENST00000320081 FOXD4L5Q5VV16 416 aaPredicted RBP20.89■□□□□ 0.93
CLIP4-201ENST00000320081 FOXD4L4Q8WXT5 416 aaPredicted RBP20.89■□□□□ 0.93
CLIP4-201ENST00000320081 RTF1Q92541 710 aaKnown RBP20.89■□□□□ 0.93
CLIP4-201ENST00000320081 RSPH4AQ5TD94 716 aa20.89■□□□□ 0.93
CLIP4-201ENST00000320081 PANK1Q8TE04 598 aa20.89■□□□□ 0.93
CLIP4-201ENST00000320081 CASKIN1Q8WXD9 1431 aa20.88■□□□□ 0.93
CLIP4-201ENST00000320081 CNTLNQ9NXG0 1405 aa20.88■□□□□ 0.93
CLIP4-201ENST00000320081 ARID3AQ99856 593 aa20.86■□□□□ 0.93
CLIP4-201ENST00000320081 GGNBP2Q9H3C7 697 aa20.86■□□□□ 0.93
CLIP4-201ENST00000320081 IPO8O15397 1037 aaKnown RBP20.86■□□□□ 0.93
CLIP4-201ENST00000320081 ZNF330Q9Y3S2 320 aaPredicted RBP20.86■□□□□ 0.93
CLIP4-201ENST00000320081 PRG4Q92954 1404 aaPredicted RBP20.85■□□□□ 0.93
CLIP4-201ENST00000320081 FOXD4L6Q3SYB3 417 aaPredicted RBP20.84■□□□□ 0.93
CLIP4-201ENST00000320081 FOXD4L3Q6VB84 417 aaPredicted RBP20.84■□□□□ 0.93
CLIP4-201ENST00000320081 MSH5O43196 834 aa20.84■□□□□ 0.93
CLIP4-201ENST00000320081 FGD1P98174 961 aa20.83■□□□□ 0.93
CLIP4-201ENST00000320081 NECTIN2Q92692 538 aa20.83■□□□□ 0.93
CLIP4-201ENST00000320081 TERF2IPQ9NYB0 399 aa20.83■□□□□ 0.93
CLIP4-201ENST00000320081 PNNQ9H307 717 aaKnown RBP20.82■□□□□ 0.92
CLIP4-201ENST00000320081 HMOX1P09601 288 aa20.81■□□□□ 0.92
CLIP4-201ENST00000320081 CABP2Q9NPB3 220 aa20.81■□□□□ 0.92
CLIP4-201ENST00000320081 FANCIQ9NVI1 1328 aa20.8■□□□□ 0.92
CLIP4-201ENST00000320081 EIF3AQ14152 1382 aaKnown RBP20.79■□□□□ 0.92
CLIP4-201ENST00000320081 ANKRD45Q5TZF3 282 aa20.78■□□□□ 0.92
CLIP4-201ENST00000320081 PNISRQ8TF01 805 aaKnown RBP20.78■□□□□ 0.92
CLIP4-201ENST00000320081 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
CLIP4-201ENST00000320081 FAM161AQ3B820 660 aa20.78■□□□□ 0.92
CLIP4-201ENST00000320081 NGDNQ8NEJ9 315 aaKnown RBP20.78■□□□□ 0.92
CLIP4-201ENST00000320081 PMFBP1Q8TBY8 1022 aa20.78■□□□□ 0.92
CLIP4-201ENST00000320081 POLA1P09884 1462 aaPredicted RBP20.77■□□□□ 0.92
CLIP4-201ENST00000320081 CENPQQ7L2Z9 268 aaPredicted RBP20.77■□□□□ 0.92
CLIP4-201ENST00000320081 SLC12A5Q9H2X9 1139 aa20.77■□□□□ 0.92
CLIP4-201ENST00000320081 BCAR3O75815 825 aa20.76■□□□□ 0.91
CLIP4-201ENST00000320081 TRIM6-TRIM34B2RNG4 842 aa20.75■□□□□ 0.91
CLIP4-201ENST00000320081 E9PSI1 815 aa20.75■□□□□ 0.91
CLIP4-201ENST00000320081 MTHFSP49914 203 aa20.75■□□□□ 0.91
CLIP4-201ENST00000320081 ERICH3Q5RHP9 1530 aa20.75■□□□□ 0.91
CLIP4-201ENST00000320081 NAIPQ13075 1403 aa20.73■□□□□ 0.91
CLIP4-201ENST00000320081 RIPK4P57078 832 aa20.73■□□□□ 0.91
CLIP4-201ENST00000320081 AMER1Q5JTC6 1135 aaPredicted RBP20.73■□□□□ 0.91
CLIP4-201ENST00000320081 CCDC9Q9Y3X0 531 aaKnown RBP20.73■□□□□ 0.91
CLIP4-201ENST00000320081 CGNL1Q0VF96 1302 aa20.73■□□□□ 0.91
CLIP4-201ENST00000320081 LNPKQ9C0E8 428 aa20.73■□□□□ 0.91
CLIP4-201ENST00000320081 TOP2BQ02880 1626 aa20.72■□□□□ 0.91
CLIP4-201ENST00000320081 CHMP4BQ9H444 224 aaKnown RBP20.72■□□□□ 0.91
CLIP4-201ENST00000320081 AMPHP49418 695 aa20.72■□□□□ 0.91
CLIP4-201ENST00000320081 CDK13Q14004 1512 aaKnown RBP20.71■□□□□ 0.91
CLIP4-201ENST00000320081 HFM1A2PYH4 1435 aa20.71■□□□□ 0.91
CLIP4-201ENST00000320081 GLIPR1L2Q4G1C9 344 aa20.71■□□□□ 0.91
CLIP4-201ENST00000320081 ZKSCAN2Q63HK3 967 aa20.71■□□□□ 0.91
CLIP4-201ENST00000320081 FYCO1Q9BQS8 1478 aa20.7■□□□□ 0.9
CLIP4-201ENST00000320081 TCP11L2Q8N4U5 519 aa20.7■□□□□ 0.9
CLIP4-201ENST00000320081 PPP2R1AP30153 589 aa20.7■□□□□ 0.9
CLIP4-201ENST00000320081 ANO8Q9HCE9 1232 aaPredicted RBP20.7■□□□□ 0.9
CLIP4-201ENST00000320081 ZNF428Q96B54 188 aa20.69■□□□□ 0.9
CLIP4-201ENST00000320081 TIAM1Q13009 1591 aa20.69■□□□□ 0.9
CLIP4-201ENST00000320081 VGFO15240 615 aaPredicted RBP20.68■□□□□ 0.9
CLIP4-201ENST00000320081 NUTM2GQ5VZR2 741 aa20.68■□□□□ 0.9
CLIP4-201ENST00000320081 TSR2Q969E8 191 aaKnown RBP20.68■□□□□ 0.9
CLIP4-201ENST00000320081 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
CLIP4-201ENST00000320081 STK31Q9BXU1 1019 aa20.68■□□□□ 0.9
CLIP4-201ENST00000320081 EVC2Q86UK5 1308 aa20.67■□□□□ 0.9
CLIP4-201ENST00000320081 HDGFP51858 240 aaKnown RBP20.67■□□□□ 0.9
CLIP4-201ENST00000320081 CSB-PGBD3P0DP91 1061 aa20.67■□□□□ 0.9
CLIP4-201ENST00000320081 TULP1O00294 542 aaPredicted RBP20.66■□□□□ 0.9
CLIP4-201ENST00000320081 C20orf194Q5TEA3 1177 aa20.64■□□□□ 0.89
CLIP4-201ENST00000320081 DZIP1LQ8IYY4 767 aaKnown RBP20.64■□□□□ 0.89
CLIP4-201ENST00000320081 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.89
CLIP4-201ENST00000320081 ZRSR1Q15695 479 aaKnown RBP20.63■□□□□ 0.89
CLIP4-201ENST00000320081 GOLGA6L4A6NEF3 574 aa20.63■□□□□ 0.89
CLIP4-201ENST00000320081 RILPL2Q969X0 211 aa20.63■□□□□ 0.89
CLIP4-201ENST00000320081 CHMP3Q9Y3E7 222 aa20.63■□□□□ 0.89
CLIP4-201ENST00000320081 DIAPH1O60610 1272 aaKnown RBP20.62■□□□□ 0.89
CLIP4-201ENST00000320081 NGEFQ8N5V2 710 aa20.62■□□□□ 0.89
CLIP4-201ENST00000320081 EIF2S2P20042 333 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms