RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 CCAR2Q8N163 923 aaKnown RBP17.52■□□□□ 0.4
RAPH1-202ENST00000319170 DDX11L8A8MPP1 907 aa17.52■□□□□ 0.4
RAPH1-202ENST00000319170 TSR1Q2NL82 804 aaKnown RBP17.52■□□□□ 0.39
RAPH1-202ENST00000319170 FRAT2O75474 233 aaPredicted RBP17.51■□□□□ 0.39
RAPH1-202ENST00000319170 CENPJQ9HC77 1338 aaPredicted RBP17.5■□□□□ 0.39
RAPH1-202ENST00000319170 BAZ1AQ9NRL2 1556 aaPredicted RBP17.5■□□□□ 0.39
RAPH1-202ENST00000319170 PATL2C9JE40 543 aaKnown RBP17.5■□□□□ 0.39
RAPH1-202ENST00000319170 CHMP4AQ9BY43 222 aa17.5■□□□□ 0.39
RAPH1-202ENST00000319170 TPM2P07951 284 aa17.49■□□□□ 0.39
RAPH1-202ENST00000319170 HSP90AA2PQ14568 343 aaPredicted RBP17.48■□□□□ 0.39
RAPH1-202ENST00000319170 HDAC5Q9UQL6 1122 aa17.48■□□□□ 0.39
RAPH1-202ENST00000319170 CLUAP1Q96AJ1 413 aa17.48■□□□□ 0.39
RAPH1-202ENST00000319170 KIF3AQ9Y496 699 aa17.48■□□□□ 0.39
RAPH1-202ENST00000319170 GOLGA6L19H0YKK7 550 aa17.47■□□□□ 0.39
RAPH1-202ENST00000319170 FBXO3Q9UK99 471 aa17.47■□□□□ 0.39
RAPH1-202ENST00000319170 CARMIL1Q5VZK9 1371 aa17.47■□□□□ 0.39
RAPH1-202ENST00000319170 FOXD4L6Q3SYB3 417 aaPredicted RBP17.46■□□□□ 0.39
RAPH1-202ENST00000319170 FOXD4L3Q6VB84 417 aaPredicted RBP17.46■□□□□ 0.39
RAPH1-202ENST00000319170 RILPL2Q969X0 211 aa17.46■□□□□ 0.39
RAPH1-202ENST00000319170 CCDC70Q6NSX1 233 aa17.46■□□□□ 0.39
RAPH1-202ENST00000319170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.392e-7■■■□□ 14.7
RAPH1-202ENST00000319170 TERF2IPQ9NYB0 399 aa17.45■□□□□ 0.38
RAPH1-202ENST00000319170 NUP155O75694 1391 aa17.44■□□□□ 0.38
RAPH1-202ENST00000319170 TPM1P09493 284 aa17.44■□□□□ 0.38
RAPH1-202ENST00000319170 LMOD3Q0VAK6 560 aa17.44■□□□□ 0.38
RAPH1-202ENST00000319170 FAM184AQ8NB25 1140 aa17.44■□□□□ 0.38
RAPH1-202ENST00000319170 TCEAL9Q9UHQ7 104 aa17.44■□□□□ 0.38
RAPH1-202ENST00000319170 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
RAPH1-202ENST00000319170 RAB3GAP2Q9H2M9 1393 aa17.44■□□□□ 0.38
RAPH1-202ENST00000319170 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
RAPH1-202ENST00000319170 AMPHP49418 695 aa17.43■□□□□ 0.38
RAPH1-202ENST00000319170 AKAP17AQ02040 695 aaKnown RBP17.43■□□□□ 0.38
RAPH1-202ENST00000319170 MCTP1Q6DN14 999 aa17.43■□□□□ 0.38
RAPH1-202ENST00000319170 NUTM2DQ5VT03 806 aaPredicted RBP17.42■□□□□ 0.38
RAPH1-202ENST00000319170 ZNF592Q92610 1267 aa17.42■□□□□ 0.38
RAPH1-202ENST00000319170 WWC1Q8IX03 1113 aa17.41■□□□□ 0.38
RAPH1-202ENST00000319170 MPHOSPH9Q99550 1183 aa17.41■□□□□ 0.38
RAPH1-202ENST00000319170 GTF2E1P29083 439 aaPredicted RBP17.41■□□□□ 0.38
RAPH1-202ENST00000319170 ZNF771Q7L3S4 317 aaPredicted RBP17.4■□□□□ 0.38
RAPH1-202ENST00000319170 ANKRD30AQ9BXX3 1397 aa17.4■□□□□ 0.38
RAPH1-202ENST00000319170 NGDNQ8NEJ9 315 aaKnown RBP17.4■□□□□ 0.38
RAPH1-202ENST00000319170 GPS2Q13227 327 aa17.39■□□□□ 0.37
RAPH1-202ENST00000319170 PCMTD1Q96MG8 357 aaPredicted RBP17.39■□□□□ 0.37
RAPH1-202ENST00000319170 RSPH6AQ9H0K4 717 aa17.39■□□□□ 0.37
RAPH1-202ENST00000319170 CARMIL2Q6F5E8 1435 aa17.39■□□□□ 0.37
RAPH1-202ENST00000319170 KIF15Q9NS87 1388 aa17.39■□□□□ 0.37
RAPH1-202ENST00000319170 SOGA1O94964 1423 aa17.39■□□□□ 0.37
RAPH1-202ENST00000319170 BECN2A8MW95 431 aa17.39■□□□□ 0.37
RAPH1-202ENST00000319170 VPS8Q8N3P4 1428 aa17.39■□□□□ 0.37
RAPH1-202ENST00000319170 PHLDB1Q86UU1 1377 aa17.39■□□□□ 0.37
RAPH1-202ENST00000319170 RRP7AQ9Y3A4 280 aaKnown RBP17.38■□□□□ 0.37
RAPH1-202ENST00000319170 ANKRD45Q5TZF3 282 aa17.38■□□□□ 0.37
RAPH1-202ENST00000319170 RAD21O60216 631 aa17.37■□□□□ 0.37
RAPH1-202ENST00000319170 ATP6V1DQ9Y5K8 247 aa17.37■□□□□ 0.37
RAPH1-202ENST00000319170 TSHZ2Q9NRE2 1034 aa17.37■□□□□ 0.37
RAPH1-202ENST00000319170 TRIM34Q9BYJ4 488 aa17.37■□□□□ 0.37
RAPH1-202ENST00000319170 DDX49Q9Y6V7 483 aaKnown RBP17.36■□□□□ 0.37
RAPH1-202ENST00000319170 SKOR2Q2VWA4 1001 aaPredicted RBP17.35■□□□□ 0.37
RAPH1-202ENST00000319170 EID1Q9Y6B2 187 aa17.35■□□□□ 0.37
RAPH1-202ENST00000319170 SYNE3Q6ZMZ3 975 aa17.35■□□□□ 0.37
RAPH1-202ENST00000319170 CENPQQ7L2Z9 268 aaPredicted RBP17.33■□□□□ 0.37
RAPH1-202ENST00000319170 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.33■□□□□ 0.36
RAPH1-202ENST00000319170 TRIM29Q14134 588 aa17.33■□□□□ 0.36
RAPH1-202ENST00000319170 AMOTL1Q8IY63 956 aa17.33■□□□□ 0.36
RAPH1-202ENST00000319170 FMN1Q68DA7 1419 aa17.33■□□□□ 0.36
RAPH1-202ENST00000319170 NOL10Q9BSC4 688 aaKnown RBP17.32■□□□□ 0.36
RAPH1-202ENST00000319170 DIAPH3Q9NSV4 1193 aa17.32■□□□□ 0.36
RAPH1-202ENST00000319170 C1orf141Q5JVX7 400 aa17.32■□□□□ 0.36
RAPH1-202ENST00000319170 ANO2Q9NQ90 1003 aa17.32■□□□□ 0.36
RAPH1-202ENST00000319170 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
RAPH1-202ENST00000319170 CTDP1Q9Y5B0 961 aaPredicted RBP17.31■□□□□ 0.36
RAPH1-202ENST00000319170 WIZO95785 1651 aa17.31■□□□□ 0.36
RAPH1-202ENST00000319170 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
RAPH1-202ENST00000319170 TEX35Q5T0J7 233 aa17.31■□□□□ 0.36
RAPH1-202ENST00000319170 SLC4A3P48751 1232 aa17.31■□□□□ 0.36
RAPH1-202ENST00000319170 CHMP4CQ96CF2 233 aa17.31■□□□□ 0.36
RAPH1-202ENST00000319170 FBXW7Q969H0 707 aa17.3■□□□□ 0.36
RAPH1-202ENST00000319170 NLRP13Q86W25 1043 aa17.3■□□□□ 0.36
RAPH1-202ENST00000319170 CCDC18Q5T9S5 1454 aa17.3■□□□□ 0.36
RAPH1-202ENST00000319170 PDE3BQ13370 1112 aa17.3■□□□□ 0.36
RAPH1-202ENST00000319170 HOOK1Q9UJC3 728 aaKnown RBP17.3■□□□□ 0.36
RAPH1-202ENST00000319170 ANKRD20A12PQ8NF67 263 aa17.29■□□□□ 0.36
RAPH1-202ENST00000319170 BCL2L13Q9BXK5 485 aa17.29■□□□□ 0.36
RAPH1-202ENST00000319170 KRI1Q8N9T8 703 aaKnown RBP17.29■□□□□ 0.36
RAPH1-202ENST00000319170 PLIN1O60240 522 aa17.29■□□□□ 0.36
RAPH1-202ENST00000319170 LRRFIP1Q32MZ4 808 aaKnown RBP17.28■□□□□ 0.36
RAPH1-202ENST00000319170 KANK4Q5T7N3 995 aaPredicted RBP17.28■□□□□ 0.36
RAPH1-202ENST00000319170 MYBBP1AQ9BQG0 1328 aaKnown RBP17.28■□□□□ 0.36
RAPH1-202ENST00000319170 IPO7O95373 1038 aaKnown RBP17.28■□□□□ 0.36
RAPH1-202ENST00000319170 HOMER1Q86YM7 354 aa17.28■□□□□ 0.36
RAPH1-202ENST00000319170 GSE1Q14687 1217 aa17.28■□□□□ 0.36
RAPH1-202ENST00000319170 NGEFQ8N5V2 710 aa17.28■□□□□ 0.36
RAPH1-202ENST00000319170 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
RAPH1-202ENST00000319170 APPP05067 770 aa17.27■□□□□ 0.36
RAPH1-202ENST00000319170 CALRP27797 417 aaKnown RBP17.27■□□□□ 0.36
RAPH1-202ENST00000319170 RRP12Q5JTH9 1297 aaKnown RBP17.26■□□□□ 0.35
RAPH1-202ENST00000319170 FOSBP53539 338 aa17.26■□□□□ 0.35
RAPH1-202ENST00000319170 EVA1CP58658 441 aa17.26■□□□□ 0.35
RAPH1-202ENST00000319170 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
RAPH1-202ENST00000319170 RUFY2Q8WXA3 655 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms