RNA–Protein interactions for RNA: ENST00000315183.11

TNRC6A-201, Transcript of trinucleotide repeat containing 6A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC6A, Length 8,303 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-201ENST00000315183 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.43□□□□□ -0.9
TNRC6A-201ENST00000315183 SYNE3Q6ZMZ3 975 aa9.43□□□□□ -0.9
TNRC6A-201ENST00000315183 NEXNQ0ZGT2 675 aa9.42□□□□□ -0.9
TNRC6A-201ENST00000315183 TRIM34Q9BYJ4 488 aa9.42□□□□□ -0.9
TNRC6A-201ENST00000315183 ISY1Q9ULR0 285 aaKnown RBP9.42□□□□□ -0.9
TNRC6A-201ENST00000315183 CARMIL1Q5VZK9 1371 aa9.42□□□□□ -0.9
TNRC6A-201ENST00000315183 GTF2E1P29083 439 aaPredicted RBP9.41□□□□□ -0.9
TNRC6A-201ENST00000315183 CTDP1Q9Y5B0 961 aaPredicted RBP9.41□□□□□ -0.9
TNRC6A-201ENST00000315183 SKOR2Q2VWA4 1001 aaPredicted RBP9.41□□□□□ -0.9
TNRC6A-201ENST00000315183 HSP90AB4PQ58FF6 505 aa9.41□□□□□ -0.9
TNRC6A-201ENST00000315183 CAGE1Q8TC20 777 aa9.41□□□□□ -0.9
TNRC6A-201ENST00000315183 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
TNRC6A-201ENST00000315183 U2SURPO15042 1029 aaKnown RBP9.4□□□□□ -0.9
TNRC6A-201ENST00000315183 TRHP20396 242 aaPredicted RBP9.4□□□□□ -0.9
TNRC6A-201ENST00000315183 TRIM21P19474 475 aaKnown RBP9.4□□□□□ -0.9
TNRC6A-201ENST00000315183 RASSF8Q8NHQ8 419 aa9.4□□□□□ -0.9
TNRC6A-201ENST00000315183 HMGB3O15347 200 aaKnown RBP9.4□□□□□ -0.91
TNRC6A-201ENST00000315183 E9PSI1 815 aa9.4□□□□□ -0.91
TNRC6A-201ENST00000315183 DDX58O95786 925 aaKnown RBP9.4□□□□□ -0.91
TNRC6A-201ENST00000315183 ZRSR2Q15696 482 aaKnown RBP9.4□□□□□ -0.91
TNRC6A-201ENST00000315183 WWC2Q6AWC2 1192 aa9.4□□□□□ -0.91
TNRC6A-201ENST00000315183 R3HCC1Q9Y3T6 440 aaKnown RBP9.4□□□□□ -0.91
TNRC6A-201ENST00000315183 PRM3Q9NNZ6 103 aa9.39□□□□□ -0.91
TNRC6A-201ENST00000315183 ACBD3Q9H3P7 528 aa9.39□□□□□ -0.91
TNRC6A-201ENST00000315183 MARCH6O60337 910 aa9.39□□□□□ -0.91
TNRC6A-201ENST00000315183 MFAP1P55081 439 aaKnown RBP9.39□□□□□ -0.91
TNRC6A-201ENST00000315183 VGFO15240 615 aaPredicted RBP9.39□□□□□ -0.91
TNRC6A-201ENST00000315183 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
TNRC6A-201ENST00000315183 RNF20Q5VTR2 975 aa9.38□□□□□ -0.91
TNRC6A-201ENST00000315183 CCDC173Q0VFZ6 552 aa9.38□□□□□ -0.91
TNRC6A-201ENST00000315183 DHX37Q8IY37 1157 aaKnown RBP9.38□□□□□ -0.91
TNRC6A-201ENST00000315183 WDHD1O75717 1129 aaPredicted RBP9.38□□□□□ -0.91
TNRC6A-201ENST00000315183 PIP4K2AP48426 406 aaPredicted RBP9.38□□□□□ -0.91
TNRC6A-201ENST00000315183 RRP7BPQ9NSQ0 103 aa9.38□□□□□ -0.91
TNRC6A-201ENST00000315183 GOLGA6L3A6NEY3 463 aa9.37□□□□□ -0.91
TNRC6A-201ENST00000315183 REC8O95072 547 aa9.36□□□□□ -0.91
TNRC6A-201ENST00000315183 DDX11L8A8MPP1 907 aa9.36□□□□□ -0.91
TNRC6A-201ENST00000315183 LAS1LQ9Y4W2 734 aaKnown RBP9.36□□□□□ -0.91
TNRC6A-201ENST00000315183 XBP1P17861 261 aa9.36□□□□□ -0.91
TNRC6A-201ENST00000315183 RGL3Q3MIN7 710 aa9.36□□□□□ -0.91
TNRC6A-201ENST00000315183 LUC7LQ9NQ29 371 aaKnown RBP9.36□□□□□ -0.91
TNRC6A-201ENST00000315183 DESP17661 470 aa9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 DCTN1Q14203 1278 aa9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 CCDC43Q96MW1 224 aaKnown RBP9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 CCDC7Q96M83 1385 aa9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 CUX2O14529 1486 aa9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 SUPT16HQ9Y5B9 1047 aaKnown RBP9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 ABCA5Q8WWZ7 1642 aa9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 MAP3K1Q13233 1512 aa9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 FRAT2O75474 233 aaPredicted RBP9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 PKNOX2Q96KN3 472 aa9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 VPS8Q8N3P4 1428 aa9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 CUX1P39880 1505 aa9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 TRIM29Q14134 588 aa9.35□□□□□ -0.91
TNRC6A-201ENST00000315183 KIF7Q2M1P5 1343 aa9.34□□□□□ -0.91
TNRC6A-201ENST00000315183 ZKSCAN1P17029 563 aaPredicted RBP9.34□□□□□ -0.91
TNRC6A-201ENST00000315183 CGNL1Q0VF96 1302 aa9.34□□□□□ -0.91
TNRC6A-201ENST00000315183 C1orf141Q5JVX7 400 aa9.34□□□□□ -0.91
TNRC6A-201ENST00000315183 CALRP27797 417 aaKnown RBP9.34□□□□□ -0.91
TNRC6A-201ENST00000315183 TRDNQ13061 729 aa9.34□□□□□ -0.91
TNRC6A-201ENST00000315183 SF3A1Q15459 793 aaKnown RBP9.34□□□□□ -0.91
TNRC6A-201ENST00000315183 NLRP13Q86W25 1043 aa9.33□□□□□ -0.92
TNRC6A-201ENST00000315183 PLCB2Q00722 1185 aa9.33□□□□□ -0.92
TNRC6A-201ENST00000315183 BRMS1Q9HCU9 246 aa9.33□□□□□ -0.92
TNRC6A-201ENST00000315183 EVC2Q86UK5 1308 aa9.33□□□□□ -0.92
TNRC6A-201ENST00000315183 CENPJQ9HC77 1338 aaPredicted RBP9.33□□□□□ -0.92
TNRC6A-201ENST00000315183 TPD52L1Q16890 204 aaPredicted RBP9.33□□□□□ -0.92
TNRC6A-201ENST00000315183 ANKRD18AQ8IVF6 992 aa9.33□□□□□ -0.92
TNRC6A-201ENST00000315183 FEZ1Q99689 392 aa9.33□□□□□ -0.92
TNRC6A-201ENST00000315183 RRP12Q5JTH9 1297 aaKnown RBP9.33□□□□□ -0.92
TNRC6A-201ENST00000315183 SALL2Q9Y467 1007 aaPredicted RBP9.33□□□□□ -0.92
TNRC6A-201ENST00000315183 TARBP1Q13395 1621 aaKnown RBP9.32□□□□□ -0.92
TNRC6A-201ENST00000315183 GOLGA6L19H0YKK7 550 aa9.32□□□□□ -0.92
TNRC6A-201ENST00000315183 SAFBQ15424 915 aaKnown RBP eCLIP9.32□□□□□ -0.921e-7■□□□□ 9.5
TNRC6A-201ENST00000315183 CCP110O43303 1012 aa9.32□□□□□ -0.92
TNRC6A-201ENST00000315183 SLC3A2P08195 630 aaKnown RBP9.32□□□□□ -0.92
TNRC6A-201ENST00000315183 NGDNQ8NEJ9 315 aaKnown RBP9.32□□□□□ -0.92
TNRC6A-201ENST00000315183 TNNT3P45378 269 aaPredicted RBP9.32□□□□□ -0.92
TNRC6A-201ENST00000315183 FRAT1Q92837 279 aaPredicted RBP9.32□□□□□ -0.92
TNRC6A-201ENST00000315183 MTERF4Q7Z6M4 381 aaKnown RBP9.31□□□□□ -0.92
TNRC6A-201ENST00000315183 PLEKHH2Q8IVE3 1493 aa9.31□□□□□ -0.92
TNRC6A-201ENST00000315183 AMPHP49418 695 aa9.31□□□□□ -0.92
TNRC6A-201ENST00000315183 NOP58Q9Y2X3 529 aaKnown RBP9.31□□□□□ -0.92
TNRC6A-201ENST00000315183 DCAF11Q8TEB1 546 aa9.31□□□□□ -0.92
TNRC6A-201ENST00000315183 CNKSR2Q8WXI2 1034 aa9.31□□□□□ -0.92
TNRC6A-201ENST00000315183 TTC5Q8N0Z6 440 aa9.31□□□□□ -0.92
TNRC6A-201ENST00000315183 ERICH2A1L162 156 aa9.31□□□□□ -0.92
TNRC6A-201ENST00000315183 HIP1O00291 1037 aa9.3□□□□□ -0.92
TNRC6A-201ENST00000315183 PRKCSHP14314 528 aaPredicted RBP9.3□□□□□ -0.92
TNRC6A-201ENST00000315183 TULP1O00294 542 aaPredicted RBP9.3□□□□□ -0.92
TNRC6A-201ENST00000315183 NAT10Q9H0A0 1025 aaKnown RBP9.3□□□□□ -0.92
TNRC6A-201ENST00000315183 CWC22Q9HCG8 908 aaKnown RBP9.3□□□□□ -0.92
TNRC6A-201ENST00000315183 ODF2Q5BJF6 829 aa9.3□□□□□ -0.92
TNRC6A-201ENST00000315183 NAP1L5Q96NT1 182 aaPredicted RBP9.3□□□□□ -0.92
TNRC6A-201ENST00000315183 WASHC2CQ9Y4E1 1318 aa9.3□□□□□ -0.92
TNRC6A-201ENST00000315183 TEX35Q5T0J7 233 aa9.3□□□□□ -0.92
TNRC6A-201ENST00000315183 ERCC4Q92889 916 aaPredicted RBP9.3□□□□□ -0.92
TNRC6A-201ENST00000315183 CCDC144AA2RUR9 1427 aa9.3□□□□□ -0.92
TNRC6A-201ENST00000315183 HSP90AA2PQ14568 343 aaPredicted RBP9.29□□□□□ -0.92
TNRC6A-201ENST00000315183 KIF15Q9NS87 1388 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms