RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 GZF1Q9H116 711 aaPredicted RBP19.2■□□□□ 0.66
KDM3A-201ENST00000312912 CLUAP1Q96AJ1 413 aa19.19■□□□□ 0.66
KDM3A-201ENST00000312912 HMMRO75330 724 aa19.19■□□□□ 0.66
KDM3A-201ENST00000312912 MFAP1P55081 439 aaKnown RBP19.19■□□□□ 0.66
KDM3A-201ENST00000312912 PTPRGP23470 1445 aa19.18■□□□□ 0.66
KDM3A-201ENST00000312912 KIAA2012Q0VF49 1180 aa19.18■□□□□ 0.66
KDM3A-201ENST00000312912 SYAP1Q96A49 352 aaPredicted RBP19.18■□□□□ 0.66
KDM3A-201ENST00000312912 SPAG9O60271 1321 aaKnown RBP19.18■□□□□ 0.66
KDM3A-201ENST00000312912 STK31Q9BXU1 1019 aa19.18■□□□□ 0.66
KDM3A-201ENST00000312912 TAOK2Q9UL54 1235 aa19.18■□□□□ 0.66
KDM3A-201ENST00000312912 HDAC5Q9UQL6 1122 aa19.18■□□□□ 0.66
KDM3A-201ENST00000312912 CENPQQ7L2Z9 268 aaPredicted RBP19.17■□□□□ 0.66
KDM3A-201ENST00000312912 CCDC146Q8IYE0 955 aa19.17■□□□□ 0.66
KDM3A-201ENST00000312912 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
KDM3A-201ENST00000312912 DRC7Q8IY82 874 aa19.17■□□□□ 0.66
KDM3A-201ENST00000312912 LMOD3Q0VAK6 560 aa19.16■□□□□ 0.66
KDM3A-201ENST00000312912 PANK3Q9H999 370 aa19.16■□□□□ 0.66
KDM3A-201ENST00000312912 PDE4AP27815 886 aa19.15■□□□□ 0.66
KDM3A-201ENST00000312912 HTATSF1O43719 755 aaKnown RBP19.14■□□□□ 0.65
KDM3A-201ENST00000312912 CCDC144AA2RUR9 1427 aa19.13■□□□□ 0.65
KDM3A-201ENST00000312912 RRP1P56182 461 aaKnown RBP19.12■□□□□ 0.65
KDM3A-201ENST00000312912 FAM161AQ3B820 660 aa19.12■□□□□ 0.65
KDM3A-201ENST00000312912 EID1Q9Y6B2 187 aa19.12■□□□□ 0.65
KDM3A-201ENST00000312912 NPHP1O15259 732 aa19.12■□□□□ 0.65
KDM3A-201ENST00000312912 NGEFQ8N5V2 710 aa19.11■□□□□ 0.65
KDM3A-201ENST00000312912 IL27Q8NEV9 243 aa19.11■□□□□ 0.65
KDM3A-201ENST00000312912 E9PSI1 815 aa19.1■□□□□ 0.65
KDM3A-201ENST00000312912 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
KDM3A-201ENST00000312912 USP47Q96K76 1375 aa19.1■□□□□ 0.65
KDM3A-201ENST00000312912 EXOC6Q8TAG9 804 aa19.08■□□□□ 0.65
KDM3A-201ENST00000312912 WASHC2CQ9Y4E1 1318 aa19.07■□□□□ 0.64
KDM3A-201ENST00000312912 TRAK1Q9UPV9 953 aa19.06■□□□□ 0.64
KDM3A-201ENST00000312912 GNL2Q13823 731 aaKnown RBP19.06■□□□□ 0.64
KDM3A-201ENST00000312912 GPATCH3Q96I76 525 aa19.05■□□□□ 0.64
KDM3A-201ENST00000312912 MAP7D2Q96T17 732 aa19.05■□□□□ 0.64
KDM3A-201ENST00000312912 ST18O60284 1047 aa19.05■□□□□ 0.64
KDM3A-201ENST00000312912 PAK3O75914 559 aaPredicted RBP19.05■□□□□ 0.64
KDM3A-201ENST00000312912 TRIM6-TRIM34B2RNG4 842 aa19.05■□□□□ 0.64
KDM3A-201ENST00000312912 GAPVD1Q14C86 1478 aa19.04■□□□□ 0.64
KDM3A-201ENST00000312912 FAM69CQ0P6D2 419 aa19.04■□□□□ 0.64
KDM3A-201ENST00000312912 CSPP1Q1MSJ5 1256 aa19.03■□□□□ 0.64
KDM3A-201ENST00000312912 ZKSCAN2Q63HK3 967 aa19.03■□□□□ 0.64
KDM3A-201ENST00000312912 DDX11L8A8MPP1 907 aa19.03■□□□□ 0.64
KDM3A-201ENST00000312912 PLIN1O60240 522 aa19.03■□□□□ 0.64
KDM3A-201ENST00000312912 UACAQ9BZF9 1416 aa19.03■□□□□ 0.64
KDM3A-201ENST00000312912 CRBNQ96SW2 442 aa19.02■□□□□ 0.64
KDM3A-201ENST00000312912 SLC4A10Q6U841 1118 aa19.02■□□□□ 0.64
KDM3A-201ENST00000312912 FAM13BQ9NYF5 915 aa19.02■□□□□ 0.63
KDM3A-201ENST00000312912 RRP7AQ9Y3A4 280 aaKnown RBP19.02■□□□□ 0.63
KDM3A-201ENST00000312912 ZNF771Q7L3S4 317 aaPredicted RBP19.01■□□□□ 0.63
KDM3A-201ENST00000312912 APAF1O14727 1248 aa19■□□□□ 0.63
KDM3A-201ENST00000312912 FAM43AQ8N2R8 423 aa18.99■□□□□ 0.63
KDM3A-201ENST00000312912 IGF1RP08069 1367 aa18.99■□□□□ 0.63
KDM3A-201ENST00000312912 TULP1O00294 542 aaPredicted RBP18.99■□□□□ 0.63
KDM3A-201ENST00000312912 VGFO15240 615 aaPredicted RBP18.99■□□□□ 0.63
KDM3A-201ENST00000312912 MTERF4Q7Z6M4 381 aaKnown RBP18.99■□□□□ 0.63
KDM3A-201ENST00000312912 COG6Q9Y2V7 657 aa18.97■□□□□ 0.63
KDM3A-201ENST00000312912 RRP9O43818 475 aaKnown RBP18.97■□□□□ 0.63
KDM3A-201ENST00000312912 PHF14O94880 888 aa18.97■□□□□ 0.63
KDM3A-201ENST00000312912 NGDNQ8NEJ9 315 aaKnown RBP18.97■□□□□ 0.63
KDM3A-201ENST00000312912 STAC3Q96MF2 364 aa18.97■□□□□ 0.63
KDM3A-201ENST00000312912 CCDC7Q96M83 1385 aa18.97■□□□□ 0.63
KDM3A-201ENST00000312912 CSB-PGBD3P0DP91 1061 aa18.97■□□□□ 0.63
KDM3A-201ENST00000312912 CCDC34Q96HJ3 373 aa18.97■□□□□ 0.63
KDM3A-201ENST00000312912 MYOM3Q5VTT5 1437 aa18.97■□□□□ 0.63
KDM3A-201ENST00000312912 BCL2L13Q9BXK5 485 aa18.96■□□□□ 0.63
KDM3A-201ENST00000312912 EVC2Q86UK5 1308 aa18.96■□□□□ 0.63
KDM3A-201ENST00000312912 AMPHP49418 695 aa18.96■□□□□ 0.63
KDM3A-201ENST00000312912 SKOR2Q2VWA4 1001 aaPredicted RBP18.96■□□□□ 0.63
KDM3A-201ENST00000312912 GORABQ5T7V8 394 aa18.95■□□□□ 0.62
KDM3A-201ENST00000312912 APPP05067 770 aa18.95■□□□□ 0.62
KDM3A-201ENST00000312912 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.95■□□□□ 0.62
KDM3A-201ENST00000312912 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.95■□□□□ 0.62
KDM3A-201ENST00000312912 FGD5Q6ZNL6 1462 aa18.95■□□□□ 0.62
KDM3A-201ENST00000312912 TPM4P67936 248 aa18.95■□□□□ 0.62
KDM3A-201ENST00000312912 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
KDM3A-201ENST00000312912 FGD6Q6ZV73 1430 aa18.95■□□□□ 0.62
KDM3A-201ENST00000312912 ANKRD45Q5TZF3 282 aa18.95■□□□□ 0.62
KDM3A-201ENST00000312912 BRPF3Q9ULD4 1205 aa18.95■□□□□ 0.62
KDM3A-201ENST00000312912 NUTM2DQ5VT03 806 aaPredicted RBP18.94■□□□□ 0.62
KDM3A-201ENST00000312912 TPM2P07951 284 aa18.94■□□□□ 0.62
KDM3A-201ENST00000312912 KIF3AQ9Y496 699 aa18.94■□□□□ 0.62
KDM3A-201ENST00000312912 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
KDM3A-201ENST00000312912 KIF7Q2M1P5 1343 aa18.93■□□□□ 0.62
KDM3A-201ENST00000312912 SLC4A3P48751 1232 aa18.93■□□□□ 0.62
KDM3A-201ENST00000312912 DDX19BQ9UMR2 479 aa18.93■□□□□ 0.62
KDM3A-201ENST00000312912 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
KDM3A-201ENST00000312912 DDX49Q9Y6V7 483 aaKnown RBP18.92■□□□□ 0.62
KDM3A-201ENST00000312912 KIF16BQ96L93 1317 aa18.92■□□□□ 0.62
KDM3A-201ENST00000312912 ELL2O00472 640 aaPredicted RBP18.91■□□□□ 0.62
KDM3A-201ENST00000312912 AAMPQ13685 434 aa18.89■□□□□ 0.62
KDM3A-201ENST00000312912 NOL8Q76FK4 1167 aaKnown RBP18.89■□□□□ 0.61
KDM3A-201ENST00000312912 ATP6V1DQ9Y5K8 247 aa18.89■□□□□ 0.61
KDM3A-201ENST00000312912 GRIN2BQ13224 1484 aa18.89■□□□□ 0.61
KDM3A-201ENST00000312912 HSP90B1P14625 803 aaKnown RBP18.89■□□□□ 0.61
KDM3A-201ENST00000312912 ZNF330Q9Y3S2 320 aaPredicted RBP18.89■□□□□ 0.61
KDM3A-201ENST00000312912 COG3Q96JB2 828 aa18.88■□□□□ 0.61
KDM3A-201ENST00000312912 DZIP1LQ8IYY4 767 aaKnown RBP18.88■□□□□ 0.61
KDM3A-201ENST00000312912 CNTLNQ9NXG0 1405 aa18.88■□□□□ 0.61
KDM3A-201ENST00000312912 CHMP3Q9Y3E7 222 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms