RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 HOMER1Q86YM7 354 aa23.65■■□□□ 1.38
BPTF-201ENST00000306378 ITPRIPQ8IWB1 547 aa23.64■■□□□ 1.38
BPTF-201ENST00000306378 TPD52L1Q16890 204 aaPredicted RBP23.63■■□□□ 1.37
BPTF-201ENST00000306378 KIAA0754O94854 1291 aa23.62■■□□□ 1.37
BPTF-201ENST00000306378 PPP1R15AO75807 674 aaPredicted RBP23.62■■□□□ 1.37
BPTF-201ENST00000306378 NUCB2P80303 420 aa23.61■■□□□ 1.37
BPTF-201ENST00000306378 KIF7Q2M1P5 1343 aa23.61■■□□□ 1.37
BPTF-201ENST00000306378 DYDC1Q8WWB3 177 aa23.61■■□□□ 1.37
BPTF-201ENST00000306378 PDCL2Q8N4E4 241 aa23.6■■□□□ 1.37
BPTF-201ENST00000306378 CCDC173Q0VFZ6 552 aa23.6■■□□□ 1.37
BPTF-201ENST00000306378 KIF27Q86VH2 1401 aa23.59■■□□□ 1.37
BPTF-201ENST00000306378 RASSF8Q8NHQ8 419 aa23.59■■□□□ 1.37
BPTF-201ENST00000306378 NEUROD2Q15784 382 aa23.59■■□□□ 1.37
BPTF-201ENST00000306378 ZNF592Q92610 1267 aa23.58■■□□□ 1.37
BPTF-201ENST00000306378 CGNL1Q0VF96 1302 aa23.58■■□□□ 1.37
BPTF-201ENST00000306378 ARID3CA6NKF2 412 aa23.58■■□□□ 1.37
BPTF-201ENST00000306378 KANK1Q14678 1352 aa23.58■■□□□ 1.36
BPTF-201ENST00000306378 PATL2C9JE40 543 aaKnown RBP23.57■■□□□ 1.36
BPTF-201ENST00000306378 H3BQV1 296 aa23.57■■□□□ 1.36
BPTF-201ENST00000306378 IFFO2Q5TF58 517 aa23.57■■□□□ 1.36
BPTF-201ENST00000306378 SF3A1Q15459 793 aaKnown RBP23.57■■□□□ 1.36
BPTF-201ENST00000306378 IFT57Q9NWB7 429 aa23.56■■□□□ 1.36
BPTF-201ENST00000306378 CHMP5Q9NZZ3 219 aa23.56■■□□□ 1.36
BPTF-201ENST00000306378 PDE4AP27815 886 aa23.56■■□□□ 1.36
BPTF-201ENST00000306378 NGEFQ8N5V2 710 aa23.56■■□□□ 1.36
BPTF-201ENST00000306378 FAM107BQ9H098 131 aa23.56■■□□□ 1.36
BPTF-201ENST00000306378 KIF15Q9NS87 1388 aa23.55■■□□□ 1.36
BPTF-201ENST00000306378 EIF3JO75822 258 aaKnown RBP23.54■■□□□ 1.36
BPTF-201ENST00000306378 ROCK1Q13464 1354 aa23.54■■□□□ 1.36
BPTF-201ENST00000306378 RRP7BPQ9NSQ0 103 aa23.54■■□□□ 1.36
BPTF-201ENST00000306378 CENPJQ9HC77 1338 aaPredicted RBP23.54■■□□□ 1.36
BPTF-201ENST00000306378 LRRFIP1Q32MZ4 808 aaKnown RBP23.53■■□□□ 1.36
BPTF-201ENST00000306378 MBD3O95983 291 aa23.52■■□□□ 1.36
BPTF-201ENST00000306378 CC2D1BQ5T0F9 858 aaKnown RBP23.51■■□□□ 1.35
BPTF-201ENST00000306378 GOLGA6L10A6NI86 522 aa23.5■■□□□ 1.35
BPTF-201ENST00000306378 SPAG9O60271 1321 aaKnown RBP23.5■■□□□ 1.35
BPTF-201ENST00000306378 NPM1P06748 294 aaKnown RBP eCLIP23.5■■□□□ 1.35
BPTF-201ENST00000306378 RNF20Q5VTR2 975 aa23.5■■□□□ 1.35
BPTF-201ENST00000306378 IQCEQ6IPM2 695 aa23.49■■□□□ 1.35
BPTF-201ENST00000306378 LMOD3Q0VAK6 560 aa23.49■■□□□ 1.35
BPTF-201ENST00000306378 DDX11Q96FC9 970 aa23.49■■□□□ 1.35
BPTF-201ENST00000306378 VPS8Q8N3P4 1428 aa23.49■■□□□ 1.35
BPTF-201ENST00000306378 TXLNBQ8N3L3 684 aa23.48■■□□□ 1.35
BPTF-201ENST00000306378 TRIM6-TRIM34B2RNG4 842 aa23.48■■□□□ 1.35
BPTF-201ENST00000306378 NLRP13Q86W25 1043 aa23.47■■□□□ 1.35
BPTF-201ENST00000306378 RTF1Q92541 710 aaKnown RBP23.47■■□□□ 1.35
BPTF-201ENST00000306378 U2SURPO15042 1029 aaKnown RBP23.47■■□□□ 1.35
BPTF-201ENST00000306378 ERLIN1O75477 346 aa23.46■■□□□ 1.35
BPTF-201ENST00000306378 C14orf37Q86TY3 774 aa23.45■■□□□ 1.34
BPTF-201ENST00000306378 MORC1Q86VD1 984 aa23.45■■□□□ 1.34
BPTF-201ENST00000306378 UBE2Q2Q8WVN8 375 aa23.45■■□□□ 1.34
BPTF-201ENST00000306378 TAOK2Q9UL54 1235 aa23.45■■□□□ 1.34
BPTF-201ENST00000306378 PRM3Q9NNZ6 103 aa23.44■■□□□ 1.34
BPTF-201ENST00000306378 CALCOCO1Q9P1Z2 691 aa23.44■■□□□ 1.34
BPTF-201ENST00000306378 CCDC47Q96A33 483 aaKnown RBP23.43■■□□□ 1.34
BPTF-201ENST00000306378 NPHP1O15259 732 aa23.42■■□□□ 1.34
BPTF-201ENST00000306378 HSP90AB3PQ58FF7 597 aa23.42■■□□□ 1.34
BPTF-201ENST00000306378 RABEP1Q15276 862 aa23.42■■□□□ 1.34
BPTF-201ENST00000306378 SASS6Q6UVJ0 657 aa23.42■■□□□ 1.34
BPTF-201ENST00000306378 STK31Q9BXU1 1019 aa23.41■■□□□ 1.34
BPTF-201ENST00000306378 GIMAP7Q8NHV1 300 aa23.4■■□□□ 1.34
BPTF-201ENST00000306378 RUFY2Q8WXA3 655 aa23.4■■□□□ 1.34
BPTF-201ENST00000306378 KIF2AO00139 706 aaPredicted RBP23.4■■□□□ 1.34
BPTF-201ENST00000306378 SMC4Q9NTJ3 1288 aa23.39■■□□□ 1.33
BPTF-201ENST00000306378 ERLIN2O94905 339 aa23.38■■□□□ 1.33
BPTF-201ENST00000306378 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
BPTF-201ENST00000306378 FAM184AQ8NB25 1140 aa23.38■■□□□ 1.33
BPTF-201ENST00000306378 TAF7LQ5H9L4 462 aa23.38■■□□□ 1.33
BPTF-201ENST00000306378 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.37■■□□□ 1.33
BPTF-201ENST00000306378 R3HCC1Q9Y3T6 440 aaKnown RBP23.37■■□□□ 1.33
BPTF-201ENST00000306378 POGKQ9P215 609 aa23.36■■□□□ 1.33
BPTF-201ENST00000306378 CPLX2Q6PUV4 134 aaKnown RBP23.36■■□□□ 1.33
BPTF-201ENST00000306378 ANKRD30AQ9BXX3 1397 aa23.36■■□□□ 1.33
BPTF-201ENST00000306378 ZKSCAN1P17029 563 aaPredicted RBP23.35■■□□□ 1.33
BPTF-201ENST00000306378 CFDP1Q9UEE9 299 aaPredicted RBP23.35■■□□□ 1.33
BPTF-201ENST00000306378 NFKBIBQ15653 356 aa23.34■■□□□ 1.33
BPTF-201ENST00000306378 RRP1P56182 461 aaKnown RBP23.34■■□□□ 1.33
BPTF-201ENST00000306378 CCDC73Q6ZRK6 1079 aa23.34■■□□□ 1.33
BPTF-201ENST00000306378 CREBRFQ8IUR6 639 aa23.33■■□□□ 1.33
BPTF-201ENST00000306378 ABCC9O60706 1549 aa23.33■■□□□ 1.33
BPTF-201ENST00000306378 ANKRD18AQ8IVF6 992 aa23.33■■□□□ 1.33
BPTF-201ENST00000306378 CT47B1P0C2W7 299 aaPredicted RBP23.33■■□□□ 1.32
BPTF-201ENST00000306378 FMN1Q68DA7 1419 aa23.32■■□□□ 1.32
BPTF-201ENST00000306378 MYBBP1AQ9BQG0 1328 aaKnown RBP23.32■■□□□ 1.32
BPTF-201ENST00000306378 LUC7LQ9NQ29 371 aaKnown RBP23.32■■□□□ 1.32
BPTF-201ENST00000306378 AXDND1Q5T1B0 1012 aaPredicted RBP23.32■■□□□ 1.32
BPTF-201ENST00000306378 PDCL3Q9H2J4 239 aa23.31■■□□□ 1.32
BPTF-201ENST00000306378 PIP4K2AP48426 406 aaPredicted RBP23.31■■□□□ 1.32
BPTF-201ENST00000306378 A0A0G2JS52 829 aa23.31■■□□□ 1.32
BPTF-201ENST00000306378 PDIA4P13667 645 aaKnown RBP23.3■■□□□ 1.32
BPTF-201ENST00000306378 PDCP20941 246 aa23.3■■□□□ 1.32
BPTF-201ENST00000306378 SMARCE1Q969G3 411 aa23.3■■□□□ 1.32
BPTF-201ENST00000306378 NINLQ9Y2I6 1382 aa23.3■■□□□ 1.32
BPTF-201ENST00000306378 AKAP17AQ02040 695 aaKnown RBP23.3■■□□□ 1.32
BPTF-201ENST00000306378 MCM2P49736 904 aa23.29■■□□□ 1.32
BPTF-201ENST00000306378 OLFM4Q6UX06 510 aa23.29■■□□□ 1.32
BPTF-201ENST00000306378 POLR3GO15318 223 aaPredicted RBP23.29■■□□□ 1.32
BPTF-201ENST00000306378 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
BPTF-201ENST00000306378 PLEKHD1A6NEE1 506 aa23.28■■□□□ 1.32
BPTF-201ENST00000306378 CCDC112Q8NEF3 446 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms