RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 LAMC3Q9Y6N6 1575 aa24.64■■□□□ 1.53
CHRNB1-201ENST00000306071 C8orf34Q49A92 452 aa24.64■■□□□ 1.53
CHRNB1-201ENST00000306071 PARD3Q8TEW0 1356 aa24.63■■□□□ 1.53
CHRNB1-201ENST00000306071 E9PCH4 1651 aa24.62■■□□□ 1.53
CHRNB1-201ENST00000306071 WDR62O43379 1518 aa24.59■■□□□ 1.53
CHRNB1-201ENST00000306071 RGS3P49796 1198 aa24.57■■□□□ 1.52
CHRNB1-201ENST00000306071 CC2D1BQ5T0F9 858 aaKnown RBP24.55■■□□□ 1.52
CHRNB1-201ENST00000306071 BLMP54132 1417 aaPredicted RBP24.54■■□□□ 1.52
CHRNB1-201ENST00000306071 ARHGEF12Q9NZN5 1544 aa24.52■■□□□ 1.52
CHRNB1-201ENST00000306071 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
CHRNB1-201ENST00000306071 IQGAP2Q13576 1575 aa24.51■■□□□ 1.51
CHRNB1-201ENST00000306071 PLEKHH2Q8IVE3 1493 aa24.5■■□□□ 1.51
CHRNB1-201ENST00000306071 PER1O15534 1290 aaPredicted RBP24.49■■□□□ 1.51
CHRNB1-201ENST00000306071 POGKQ9P215 609 aa24.49■■□□□ 1.51
CHRNB1-201ENST00000306071 CFDP1Q9UEE9 299 aaPredicted RBP24.49■■□□□ 1.51
CHRNB1-201ENST00000306071 ADGBQ8N7X0 1667 aa24.49■■□□□ 1.51
CHRNB1-201ENST00000306071 ZMYM4Q5VZL5 1548 aa24.49■■□□□ 1.51
CHRNB1-201ENST00000306071 ZNF777Q9ULD5 760 aaPredicted RBP24.49■■□□□ 1.51
CHRNB1-201ENST00000306071 INSRP06213 1382 aa24.48■■□□□ 1.51
CHRNB1-201ENST00000306071 KIAA0586Q9BVV6 1533 aa24.47■■□□□ 1.51
CHRNB1-201ENST00000306071 CAMSAP2Q08AD1 1489 aa24.47■■□□□ 1.51
CHRNB1-201ENST00000306071 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.47■■□□□ 1.51
CHRNB1-201ENST00000306071 NUP155O75694 1391 aa24.45■■□□□ 1.51
CHRNB1-201ENST00000306071 ANKRD30AQ9BXX3 1397 aa24.44■■□□□ 1.5
CHRNB1-201ENST00000306071 RRAGDQ9NQL2 400 aaPredicted RBP24.44■■□□□ 1.5
CHRNB1-201ENST00000306071 ANKRD50Q9ULJ7 1429 aa24.43■■□□□ 1.5
CHRNB1-201ENST00000306071 L1TD1Q5T7N2 865 aaKnown RBP24.42■■□□□ 1.5
CHRNB1-201ENST00000306071 ADAMTS8Q9UP79 889 aa24.42■■□□□ 1.5
CHRNB1-201ENST00000306071 DUSP27Q5VZP5 1158 aa24.41■■□□□ 1.5
CHRNB1-201ENST00000306071 ADGRL2O95490 1459 aa24.4■■□□□ 1.5
CHRNB1-201ENST00000306071 GLIPR1L2Q4G1C9 344 aa24.39■■□□□ 1.49
CHRNB1-201ENST00000306071 SLKQ9H2G2 1235 aaPredicted RBP24.39■■□□□ 1.49
CHRNB1-201ENST00000306071 PANK3Q9H999 370 aa24.39■■□□□ 1.49
CHRNB1-201ENST00000306071 BECN1Q14457 450 aa24.38■■□□□ 1.49
CHRNB1-201ENST00000306071 ZNF608Q9ULD9 1512 aaPredicted RBP24.37■■□□□ 1.49
CHRNB1-201ENST00000306071 PKNOX2Q96KN3 472 aa24.36■■□□□ 1.49
CHRNB1-201ENST00000306071 GOLGA2Q08379 1002 aa24.36■■□□□ 1.49
CHRNB1-201ENST00000306071 NUP153P49790 1475 aaKnown RBP24.35■■□□□ 1.49
CHRNB1-201ENST00000306071 PLEKHH1Q9ULM0 1364 aa24.35■■□□□ 1.49
CHRNB1-201ENST00000306071 WDR43Q15061 677 aaKnown RBP eCLIP24.35■■□□□ 1.49
CHRNB1-201ENST00000306071 ARXQ96QS3 562 aa24.35■■□□□ 1.49
CHRNB1-201ENST00000306071 USP19O94966 1318 aa24.34■■□□□ 1.49
CHRNB1-201ENST00000306071 CROCC2H7BZ55 1655 aa24.34■■□□□ 1.49
CHRNB1-201ENST00000306071 PRG4Q92954 1404 aaPredicted RBP24.33■■□□□ 1.49
CHRNB1-201ENST00000306071 NBPF1Q3BBV0 1214 aa24.32■■□□□ 1.48
CHRNB1-201ENST00000306071 ITSN2Q9NZM3 1697 aa24.32■■□□□ 1.48
CHRNB1-201ENST00000306071 DISP3Q9P2K9 1392 aa24.31■■□□□ 1.48
CHRNB1-201ENST00000306071 CEP170Q5SW79 1584 aa24.31■■□□□ 1.48
CHRNB1-201ENST00000306071 NAP1L5Q96NT1 182 aaPredicted RBP24.31■■□□□ 1.48
CHRNB1-201ENST00000306071 COL17A1Q9UMD9 1497 aaPredicted RBP24.3■■□□□ 1.48
CHRNB1-201ENST00000306071 GPATCH8Q9UKJ3 1502 aaKnown RBP24.3■■□□□ 1.48
CHRNB1-201ENST00000306071 SEC24BO95487 1268 aa24.29■■□□□ 1.48
CHRNB1-201ENST00000306071 VIRMAQ69YN4 1812 aaKnown RBP24.28■■□□□ 1.48
CHRNB1-201ENST00000306071 TROQ12816 1431 aaPredicted RBP24.28■■□□□ 1.48
CHRNB1-201ENST00000306071 PRAG1Q86YV5 1406 aa24.28■■□□□ 1.48
CHRNB1-201ENST00000306071 TRPM1Q7Z4N2 1603 aa24.28■■□□□ 1.48
CHRNB1-201ENST00000306071 RGL3Q3MIN7 710 aa24.27■■□□□ 1.48
CHRNB1-201ENST00000306071 EIF3AQ14152 1382 aaKnown RBP24.27■■□□□ 1.48
CHRNB1-201ENST00000306071 PNNQ9H307 717 aaKnown RBP24.27■■□□□ 1.48
CHRNB1-201ENST00000306071 RAPGEF6Q8TEU7 1601 aa24.27■■□□□ 1.48
CHRNB1-201ENST00000306071 IGHDP01880 384 aa24.26■■□□□ 1.47
CHRNB1-201ENST00000306071 KDM5DQ9BY66 1539 aa24.26■■□□□ 1.47
CHRNB1-201ENST00000306071 ZNF521Q96K83 1311 aa24.26■■□□□ 1.47
CHRNB1-201ENST00000306071 SLFN5Q08AF3 891 aa24.25■■□□□ 1.47
CHRNB1-201ENST00000306071 TESK2Q96S53 571 aa24.25■■□□□ 1.47
CHRNB1-201ENST00000306071 PBRM1Q86U86 1689 aa24.25■■□□□ 1.47
CHRNB1-201ENST00000306071 GOLGA6L3A6NEY3 463 aa24.24■■□□□ 1.47
CHRNB1-201ENST00000306071 TMF1P82094 1093 aa24.23■■□□□ 1.47
CHRNB1-201ENST00000306071 BCAR3O75815 825 aa24.23■■□□□ 1.47
CHRNB1-201ENST00000306071 XRCC6P12956 609 aaKnown RBP eCLIP24.23■■□□□ 1.47
CHRNB1-201ENST00000306071 ERBINQ96RT1 1412 aa24.22■■□□□ 1.47
CHRNB1-201ENST00000306071 MAPK8IP3Q9UPT6 1336 aa24.22■■□□□ 1.47
CHRNB1-201ENST00000306071 VSIG10Q8N0Z9 540 aa24.22■■□□□ 1.47
CHRNB1-201ENST00000306071 ANTXR1Q9H6X2 564 aa24.22■■□□□ 1.47
CHRNB1-201ENST00000306071 PPP2R1AP30153 589 aa24.21■■□□□ 1.47
CHRNB1-201ENST00000306071 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
CHRNB1-201ENST00000306071 KIAA0556O60303 1618 aa24.2■■□□□ 1.47
CHRNB1-201ENST00000306071 C9orf84Q5VXU9 1444 aa24.2■■□□□ 1.46
CHRNB1-201ENST00000306071 ADAMTS12P58397 1594 aa24.2■■□□□ 1.46
CHRNB1-201ENST00000306071 HSP90AA2PQ14568 343 aaPredicted RBP24.19■■□□□ 1.46
CHRNB1-201ENST00000306071 UPF2Q9HAU5 1272 aaKnown RBP24.19■■□□□ 1.46
CHRNB1-201ENST00000306071 HSP90AA1P07900 732 aaKnown RBP24.19■■□□□ 1.46
CHRNB1-201ENST00000306071 GZF1Q9H116 711 aaPredicted RBP24.19■■□□□ 1.46
CHRNB1-201ENST00000306071 KNSTRNQ9Y448 316 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 DISP1Q96F81 1524 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 GPRASP1Q5JY77 1395 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 TSPY4P0CV99 314 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 TSPY10P0CW01 314 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 CLCN1P35523 988 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 CCDC144AA2RUR9 1427 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 CCDC146Q8IYE0 955 aa24.17■■□□□ 1.46
CHRNB1-201ENST00000306071 PANK2Q9BZ23 570 aa24.16■■□□□ 1.46
CHRNB1-201ENST00000306071 NKTRP30414 1462 aaKnown RBP24.16■■□□□ 1.46
CHRNB1-201ENST00000306071 EIF4G3O43432 1585 aaKnown RBP24.15■■□□□ 1.46
CHRNB1-201ENST00000306071 SPINK5Q9NQ38 1064 aaPredicted RBP24.15■■□□□ 1.46
CHRNB1-201ENST00000306071 TRMT2AQ8IZ69 625 aaKnown RBP24.15■■□□□ 1.46
CHRNB1-201ENST00000306071 ZMYND15Q9H091 742 aa24.15■■□□□ 1.46
CHRNB1-201ENST00000306071 CGNL1Q0VF96 1302 aa24.15■■□□□ 1.46
CHRNB1-201ENST00000306071 NLRP1Q9C000 1473 aa24.14■■□□□ 1.45
CHRNB1-201ENST00000306071 PRDM15P57071 1507 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms