RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 LAMC3Q9Y6N6 1575 aa24.64■■□□□ 1.53
CHRNB1-201ENST00000306071 C8orf34Q49A92 452 aa24.64■■□□□ 1.53
CHRNB1-201ENST00000306071 PARD3Q8TEW0 1356 aa24.63■■□□□ 1.53
CHRNB1-201ENST00000306071 E9PCH4 1651 aa24.62■■□□□ 1.53
CHRNB1-201ENST00000306071 WDR62O43379 1518 aa24.59■■□□□ 1.53
CHRNB1-201ENST00000306071 RGS3P49796 1198 aa24.57■■□□□ 1.52
CHRNB1-201ENST00000306071 CC2D1BQ5T0F9 858 aaKnown RBP24.55■■□□□ 1.52
CHRNB1-201ENST00000306071 BLMP54132 1417 aaPredicted RBP24.54■■□□□ 1.52
CHRNB1-201ENST00000306071 ARHGEF12Q9NZN5 1544 aa24.52■■□□□ 1.52
CHRNB1-201ENST00000306071 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
CHRNB1-201ENST00000306071 IQGAP2Q13576 1575 aa24.51■■□□□ 1.51
CHRNB1-201ENST00000306071 PLEKHH2Q8IVE3 1493 aa24.5■■□□□ 1.51
CHRNB1-201ENST00000306071 PER1O15534 1290 aaPredicted RBP24.49■■□□□ 1.51
CHRNB1-201ENST00000306071 POGKQ9P215 609 aa24.49■■□□□ 1.51
CHRNB1-201ENST00000306071 CFDP1Q9UEE9 299 aaPredicted RBP24.49■■□□□ 1.51
CHRNB1-201ENST00000306071 ADGBQ8N7X0 1667 aa24.49■■□□□ 1.51
CHRNB1-201ENST00000306071 ZMYM4Q5VZL5 1548 aa24.49■■□□□ 1.51
CHRNB1-201ENST00000306071 ZNF777Q9ULD5 760 aaPredicted RBP24.49■■□□□ 1.51
CHRNB1-201ENST00000306071 INSRP06213 1382 aa24.48■■□□□ 1.51
CHRNB1-201ENST00000306071 KIAA0586Q9BVV6 1533 aa24.47■■□□□ 1.51
CHRNB1-201ENST00000306071 CAMSAP2Q08AD1 1489 aa24.47■■□□□ 1.51
CHRNB1-201ENST00000306071 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.47■■□□□ 1.51
CHRNB1-201ENST00000306071 NUP155O75694 1391 aa24.45■■□□□ 1.51
CHRNB1-201ENST00000306071 ANKRD30AQ9BXX3 1397 aa24.44■■□□□ 1.5
CHRNB1-201ENST00000306071 RRAGDQ9NQL2 400 aaPredicted RBP24.44■■□□□ 1.5
CHRNB1-201ENST00000306071 ANKRD50Q9ULJ7 1429 aa24.43■■□□□ 1.5
CHRNB1-201ENST00000306071 L1TD1Q5T7N2 865 aaKnown RBP24.42■■□□□ 1.5
CHRNB1-201ENST00000306071 ADAMTS8Q9UP79 889 aa24.42■■□□□ 1.5
CHRNB1-201ENST00000306071 DUSP27Q5VZP5 1158 aa24.41■■□□□ 1.5
CHRNB1-201ENST00000306071 ADGRL2O95490 1459 aa24.4■■□□□ 1.5
CHRNB1-201ENST00000306071 GLIPR1L2Q4G1C9 344 aa24.39■■□□□ 1.49
CHRNB1-201ENST00000306071 SLKQ9H2G2 1235 aaPredicted RBP24.39■■□□□ 1.49
CHRNB1-201ENST00000306071 PANK3Q9H999 370 aa24.39■■□□□ 1.49
CHRNB1-201ENST00000306071 BECN1Q14457 450 aa24.38■■□□□ 1.49
CHRNB1-201ENST00000306071 ZNF608Q9ULD9 1512 aaPredicted RBP24.37■■□□□ 1.49
CHRNB1-201ENST00000306071 PKNOX2Q96KN3 472 aa24.36■■□□□ 1.49
CHRNB1-201ENST00000306071 GOLGA2Q08379 1002 aa24.36■■□□□ 1.49
CHRNB1-201ENST00000306071 NUP153P49790 1475 aaKnown RBP24.35■■□□□ 1.49
CHRNB1-201ENST00000306071 PLEKHH1Q9ULM0 1364 aa24.35■■□□□ 1.49
CHRNB1-201ENST00000306071 WDR43Q15061 677 aaKnown RBP eCLIP24.35■■□□□ 1.49
CHRNB1-201ENST00000306071 ARXQ96QS3 562 aa24.35■■□□□ 1.49
CHRNB1-201ENST00000306071 USP19O94966 1318 aa24.34■■□□□ 1.49
CHRNB1-201ENST00000306071 CROCC2H7BZ55 1655 aa24.34■■□□□ 1.49
CHRNB1-201ENST00000306071 PRG4Q92954 1404 aaPredicted RBP24.33■■□□□ 1.49
CHRNB1-201ENST00000306071 NBPF1Q3BBV0 1214 aa24.32■■□□□ 1.48
CHRNB1-201ENST00000306071 ITSN2Q9NZM3 1697 aa24.32■■□□□ 1.48
CHRNB1-201ENST00000306071 DISP3Q9P2K9 1392 aa24.31■■□□□ 1.48
CHRNB1-201ENST00000306071 CEP170Q5SW79 1584 aa24.31■■□□□ 1.48
CHRNB1-201ENST00000306071 NAP1L5Q96NT1 182 aaPredicted RBP24.31■■□□□ 1.48
CHRNB1-201ENST00000306071 COL17A1Q9UMD9 1497 aaPredicted RBP24.3■■□□□ 1.48
CHRNB1-201ENST00000306071 GPATCH8Q9UKJ3 1502 aaKnown RBP24.3■■□□□ 1.48
CHRNB1-201ENST00000306071 SEC24BO95487 1268 aa24.29■■□□□ 1.48
CHRNB1-201ENST00000306071 VIRMAQ69YN4 1812 aaKnown RBP24.28■■□□□ 1.48
CHRNB1-201ENST00000306071 TROQ12816 1431 aaPredicted RBP24.28■■□□□ 1.48
CHRNB1-201ENST00000306071 PRAG1Q86YV5 1406 aa24.28■■□□□ 1.48
CHRNB1-201ENST00000306071 TRPM1Q7Z4N2 1603 aa24.28■■□□□ 1.48
CHRNB1-201ENST00000306071 RGL3Q3MIN7 710 aa24.27■■□□□ 1.48
CHRNB1-201ENST00000306071 EIF3AQ14152 1382 aaKnown RBP24.27■■□□□ 1.48
CHRNB1-201ENST00000306071 PNNQ9H307 717 aaKnown RBP24.27■■□□□ 1.48
CHRNB1-201ENST00000306071 RAPGEF6Q8TEU7 1601 aa24.27■■□□□ 1.48
CHRNB1-201ENST00000306071 IGHDP01880 384 aa24.26■■□□□ 1.47
CHRNB1-201ENST00000306071 KDM5DQ9BY66 1539 aa24.26■■□□□ 1.47
CHRNB1-201ENST00000306071 ZNF521Q96K83 1311 aa24.26■■□□□ 1.47
CHRNB1-201ENST00000306071 SLFN5Q08AF3 891 aa24.25■■□□□ 1.47
CHRNB1-201ENST00000306071 TESK2Q96S53 571 aa24.25■■□□□ 1.47
CHRNB1-201ENST00000306071 PBRM1Q86U86 1689 aa24.25■■□□□ 1.47
CHRNB1-201ENST00000306071 GOLGA6L3A6NEY3 463 aa24.24■■□□□ 1.47
CHRNB1-201ENST00000306071 TMF1P82094 1093 aa24.23■■□□□ 1.47
CHRNB1-201ENST00000306071 BCAR3O75815 825 aa24.23■■□□□ 1.47
CHRNB1-201ENST00000306071 XRCC6P12956 609 aaKnown RBP eCLIP24.23■■□□□ 1.47
CHRNB1-201ENST00000306071 ERBINQ96RT1 1412 aa24.22■■□□□ 1.47
CHRNB1-201ENST00000306071 MAPK8IP3Q9UPT6 1336 aa24.22■■□□□ 1.47
CHRNB1-201ENST00000306071 VSIG10Q8N0Z9 540 aa24.22■■□□□ 1.47
CHRNB1-201ENST00000306071 ANTXR1Q9H6X2 564 aa24.22■■□□□ 1.47
CHRNB1-201ENST00000306071 PPP2R1AP30153 589 aa24.21■■□□□ 1.47
CHRNB1-201ENST00000306071 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
CHRNB1-201ENST00000306071 KIAA0556O60303 1618 aa24.2■■□□□ 1.47
CHRNB1-201ENST00000306071 C9orf84Q5VXU9 1444 aa24.2■■□□□ 1.46
CHRNB1-201ENST00000306071 ADAMTS12P58397 1594 aa24.2■■□□□ 1.46
CHRNB1-201ENST00000306071 HSP90AA2PQ14568 343 aaPredicted RBP24.19■■□□□ 1.46
CHRNB1-201ENST00000306071 UPF2Q9HAU5 1272 aaKnown RBP24.19■■□□□ 1.46
CHRNB1-201ENST00000306071 HSP90AA1P07900 732 aaKnown RBP24.19■■□□□ 1.46
CHRNB1-201ENST00000306071 GZF1Q9H116 711 aaPredicted RBP24.19■■□□□ 1.46
CHRNB1-201ENST00000306071 KNSTRNQ9Y448 316 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 DISP1Q96F81 1524 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 GPRASP1Q5JY77 1395 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 TSPY4P0CV99 314 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 TSPY10P0CW01 314 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 CLCN1P35523 988 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 CCDC144AA2RUR9 1427 aa24.18■■□□□ 1.46
CHRNB1-201ENST00000306071 CCDC146Q8IYE0 955 aa24.17■■□□□ 1.46
CHRNB1-201ENST00000306071 PANK2Q9BZ23 570 aa24.16■■□□□ 1.46
CHRNB1-201ENST00000306071 NKTRP30414 1462 aaKnown RBP24.16■■□□□ 1.46
CHRNB1-201ENST00000306071 EIF4G3O43432 1585 aaKnown RBP24.15■■□□□ 1.46
CHRNB1-201ENST00000306071 SPINK5Q9NQ38 1064 aaPredicted RBP24.15■■□□□ 1.46
CHRNB1-201ENST00000306071 TRMT2AQ8IZ69 625 aaKnown RBP24.15■■□□□ 1.46
CHRNB1-201ENST00000306071 ZMYND15Q9H091 742 aa24.15■■□□□ 1.46
CHRNB1-201ENST00000306071 CGNL1Q0VF96 1302 aa24.15■■□□□ 1.46
CHRNB1-201ENST00000306071 NLRP1Q9C000 1473 aa24.14■■□□□ 1.45
CHRNB1-201ENST00000306071 PRDM15P57071 1507 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms