RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 GSE1Q14687 1217 aa24.65■■□□□ 1.54
CTNND2-201ENST00000304623 EFCAB2Q5VUJ9 269 aa24.65■■□□□ 1.54
CTNND2-201ENST00000304623 PAK3O75914 559 aaPredicted RBP24.63■■□□□ 1.53
CTNND2-201ENST00000304623 NOL8Q76FK4 1167 aaKnown RBP24.63■■□□□ 1.53
CTNND2-201ENST00000304623 SLC4A10Q6U841 1118 aa24.63■■□□□ 1.53
CTNND2-201ENST00000304623 TPM3P06753 285 aa24.61■■□□□ 1.53
CTNND2-201ENST00000304623 CSB-PGBD3P0DP91 1061 aa24.6■■□□□ 1.53
CTNND2-201ENST00000304623 DDX49Q9Y6V7 483 aaKnown RBP24.6■■□□□ 1.53
CTNND2-201ENST00000304623 ATP6V1DQ9Y5K8 247 aa24.59■■□□□ 1.53
CTNND2-201ENST00000304623 TAF7LQ5H9L4 462 aa24.59■■□□□ 1.53
CTNND2-201ENST00000304623 CHMP3Q9Y3E7 222 aa24.58■■□□□ 1.53
CTNND2-201ENST00000304623 ZBED9Q6R2W3 1325 aa24.58■■□□□ 1.53
CTNND2-201ENST00000304623 FANCIQ9NVI1 1328 aa24.58■■□□□ 1.53
CTNND2-201ENST00000304623 RRP1P56182 461 aaKnown RBP24.58■■□□□ 1.53
CTNND2-201ENST00000304623 ZNF330Q9Y3S2 320 aaPredicted RBP24.58■■□□□ 1.53
CTNND2-201ENST00000304623 SF3A1Q15459 793 aaKnown RBP24.57■■□□□ 1.52
CTNND2-201ENST00000304623 CHMP4CQ96CF2 233 aa24.57■■□□□ 1.52
CTNND2-201ENST00000304623 RASSF8Q8NHQ8 419 aa24.57■■□□□ 1.52
CTNND2-201ENST00000304623 RSPH4AQ5TD94 716 aa24.56■■□□□ 1.52
CTNND2-201ENST00000304623 A0A0U1RQG5 324 aaPredicted RBP24.56■■□□□ 1.52
CTNND2-201ENST00000304623 E9PSI1 815 aa24.55■■□□□ 1.52
CTNND2-201ENST00000304623 CGNL1Q0VF96 1302 aa24.55■■□□□ 1.52
CTNND2-201ENST00000304623 CCDC88BA6NC98 1476 aa24.55■■□□□ 1.52
CTNND2-201ENST00000304623 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
CTNND2-201ENST00000304623 ZKSCAN2Q63HK3 967 aa24.53■■□□□ 1.52
CTNND2-201ENST00000304623 FOXD4L5Q5VV16 416 aaPredicted RBP24.52■■□□□ 1.52
CTNND2-201ENST00000304623 EXOC6Q8TAG9 804 aa24.52■■□□□ 1.52
CTNND2-201ENST00000304623 FOXD4L4Q8WXT5 416 aaPredicted RBP24.52■■□□□ 1.52
CTNND2-201ENST00000304623 PRKRIP1Q9H875 184 aaPredicted RBP24.52■■□□□ 1.52
CTNND2-201ENST00000304623 GOLGA6L19H0YKK7 550 aa24.5■■□□□ 1.51
CTNND2-201ENST00000304623 ANKRD45Q5TZF3 282 aa24.5■■□□□ 1.51
CTNND2-201ENST00000304623 DHX57Q6P158 1386 aaKnown RBP24.5■■□□□ 1.51
CTNND2-201ENST00000304623 H3BQV1 296 aa24.49■■□□□ 1.51
CTNND2-201ENST00000304623 KIF3BO15066 747 aa24.49■■□□□ 1.51
CTNND2-201ENST00000304623 SLC4A3P48751 1232 aa24.49■■□□□ 1.51
CTNND2-201ENST00000304623 IFFO2Q5TF58 517 aa24.49■■□□□ 1.51
CTNND2-201ENST00000304623 NCBP3Q53F19 620 aaKnown RBP24.49■■□□□ 1.51
CTNND2-201ENST00000304623 PANK3Q9H999 370 aa24.49■■□□□ 1.51
CTNND2-201ENST00000304623 CRBNQ96SW2 442 aa24.49■■□□□ 1.51
CTNND2-201ENST00000304623 CREBRFQ8IUR6 639 aa24.48■■□□□ 1.51
CTNND2-201ENST00000304623 ST20-MTHFSA0A0A6YYL1 179 aa24.48■■□□□ 1.51
CTNND2-201ENST00000304623 BECN2A8MW95 431 aa24.46■■□□□ 1.51
CTNND2-201ENST00000304623 RRP7AQ9Y3A4 280 aaKnown RBP24.46■■□□□ 1.51
CTNND2-201ENST00000304623 CCDC18Q5T9S5 1454 aa24.46■■□□□ 1.51
CTNND2-201ENST00000304623 AMPHP49418 695 aa24.45■■□□□ 1.51
CTNND2-201ENST00000304623 FAM184AQ8NB25 1140 aa24.45■■□□□ 1.51
CTNND2-201ENST00000304623 PLIN1O60240 522 aa24.45■■□□□ 1.5
CTNND2-201ENST00000304623 RILPL2Q969X0 211 aa24.45■■□□□ 1.5
CTNND2-201ENST00000304623 HNRNPMP52272 730 aaKnown RBP eCLIP24.43■■□□□ 1.5
CTNND2-201ENST00000304623 CEP89Q96ST8 783 aa24.43■■□□□ 1.5
CTNND2-201ENST00000304623 TMX4Q9H1E5 349 aaPredicted RBP24.43■■□□□ 1.5
CTNND2-201ENST00000304623 TSR1Q2NL82 804 aaKnown RBP24.43■■□□□ 1.5
CTNND2-201ENST00000304623 NGEFQ8N5V2 710 aa24.43■■□□□ 1.5
CTNND2-201ENST00000304623 TOMM22Q9NS69 142 aa24.43■■□□□ 1.5
CTNND2-201ENST00000304623 GPS2Q13227 327 aa24.42■■□□□ 1.5
CTNND2-201ENST00000304623 REC8O95072 547 aa24.41■■□□□ 1.5
CTNND2-201ENST00000304623 NGDNQ8NEJ9 315 aaKnown RBP24.41■■□□□ 1.5
CTNND2-201ENST00000304623 CHMP5Q9NZZ3 219 aa24.41■■□□□ 1.5
CTNND2-201ENST00000304623 TPD52L1Q16890 204 aaPredicted RBP24.41■■□□□ 1.5
CTNND2-201ENST00000304623 SETQ01105 290 aaPredicted RBP24.41■■□□□ 1.5
CTNND2-201ENST00000304623 COG6Q9Y2V7 657 aa24.4■■□□□ 1.5
CTNND2-201ENST00000304623 TPM1P09493 284 aa24.4■■□□□ 1.5
CTNND2-201ENST00000304623 BCL2L13Q9BXK5 485 aa24.4■■□□□ 1.5
CTNND2-201ENST00000304623 CCDC144AA2RUR9 1427 aa24.4■■□□□ 1.5
CTNND2-201ENST00000304623 DDX19BQ9UMR2 479 aa24.39■■□□□ 1.5
CTNND2-201ENST00000304623 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.39■■□□□ 1.49
CTNND2-201ENST00000304623 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
CTNND2-201ENST00000304623 VSIG10Q8N0Z9 540 aa24.38■■□□□ 1.49
CTNND2-201ENST00000304623 FHOD3Q2V2M9 1422 aa24.37■■□□□ 1.49
CTNND2-201ENST00000304623 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
CTNND2-201ENST00000304623 RUFY2Q8WXA3 655 aa24.37■■□□□ 1.49
CTNND2-201ENST00000304623 TRAK1Q9UPV9 953 aa24.37■■□□□ 1.49
CTNND2-201ENST00000304623 UACAQ9BZF9 1416 aa24.36■■□□□ 1.49
CTNND2-201ENST00000304623 DIAPH3Q9NSV4 1193 aa24.36■■□□□ 1.49
CTNND2-201ENST00000304623 CCDC70Q6NSX1 233 aa24.36■■□□□ 1.49
CTNND2-201ENST00000304623 TDRD9Q8NDG6 1382 aaKnown RBP24.35■■□□□ 1.49
CTNND2-201ENST00000304623 PES1O00541 588 aaKnown RBP24.35■■□□□ 1.49
CTNND2-201ENST00000304623 MARCH6O60337 910 aa24.35■■□□□ 1.49
CTNND2-201ENST00000304623 USP47Q96K76 1375 aa24.35■■□□□ 1.49
CTNND2-201ENST00000304623 WASHC2CQ9Y4E1 1318 aa24.35■■□□□ 1.49
CTNND2-201ENST00000304623 CCAR2Q8N163 923 aaKnown RBP24.34■■□□□ 1.49
CTNND2-201ENST00000304623 EID1Q9Y6B2 187 aa24.34■■□□□ 1.49
CTNND2-201ENST00000304623 TPM2P07951 284 aa24.34■■□□□ 1.49
CTNND2-201ENST00000304623 ELL2O00472 640 aaPredicted RBP24.34■■□□□ 1.49
CTNND2-201ENST00000304623 PDS5BQ9NTI5 1447 aa24.33■■□□□ 1.49
CTNND2-201ENST00000304623 LRRFIP1Q32MZ4 808 aaKnown RBP24.33■■□□□ 1.49
CTNND2-201ENST00000304623 CPLX2Q6PUV4 134 aaKnown RBP24.33■■□□□ 1.48
CTNND2-201ENST00000304623 ZKSCAN1P17029 563 aaPredicted RBP24.32■■□□□ 1.48
CTNND2-201ENST00000304623 AKAP17AQ02040 695 aaKnown RBP24.32■■□□□ 1.48
CTNND2-201ENST00000304623 FOXD4L6Q3SYB3 417 aaPredicted RBP24.32■■□□□ 1.48
CTNND2-201ENST00000304623 FOXD4L3Q6VB84 417 aaPredicted RBP24.32■■□□□ 1.48
CTNND2-201ENST00000304623 SMARCA2P51531 1590 aa24.32■■□□□ 1.48
CTNND2-201ENST00000304623 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.31■■□□□ 1.48
CTNND2-201ENST00000304623 APAF1O14727 1248 aa24.31■■□□□ 1.48
CTNND2-201ENST00000304623 LTV1Q96GA3 475 aaPredicted RBP24.31■■□□□ 1.48
CTNND2-201ENST00000304623 PDE4CQ08493 712 aa24.3■■□□□ 1.48
CTNND2-201ENST00000304623 API5Q9BZZ5 524 aaKnown RBP24.3■■□□□ 1.48
CTNND2-201ENST00000304623 ZNF771Q7L3S4 317 aaPredicted RBP24.3■■□□□ 1.48
CTNND2-201ENST00000304623 FRAT2O75474 233 aaPredicted RBP24.3■■□□□ 1.48
CTNND2-201ENST00000304623 DZIP1LQ8IYY4 767 aaKnown RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms