RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 RAPGEF3O95398 923 aa6.63□□□□□ -1.35
ZNF560-201ENST00000301480 ARHGAP35Q9NRY4 1499 aa6.63□□□□□ -1.35
ZNF560-201ENST00000301480 VSIG10Q8N0Z9 540 aa6.63□□□□□ -1.35
ZNF560-201ENST00000301480 PCF11O94913 1555 aaKnown RBP6.63□□□□□ -1.35
ZNF560-201ENST00000301480 ZNF326Q5BKZ1 582 aaKnown RBP6.63□□□□□ -1.35
ZNF560-201ENST00000301480 MLH3Q9UHC1 1453 aa6.63□□□□□ -1.35
ZNF560-201ENST00000301480 SCAPERQ9BY12 1400 aa6.62□□□□□ -1.35
ZNF560-201ENST00000301480 ACIN1Q9UKV3 1341 aaKnown RBP6.62□□□□□ -1.35
ZNF560-201ENST00000301480 BRPF3Q9ULD4 1205 aa6.62□□□□□ -1.35
ZNF560-201ENST00000301480 AGLP35573 1532 aa6.62□□□□□ -1.35
ZNF560-201ENST00000301480 CLSPNQ9HAW4 1339 aa6.62□□□□□ -1.35
ZNF560-201ENST00000301480 KDM5CP41229 1560 aa6.62□□□□□ -1.35
ZNF560-201ENST00000301480 TTC37Q6PGP7 1564 aa6.62□□□□□ -1.35
ZNF560-201ENST00000301480 MYO5CQ9NQX4 1742 aa6.62□□□□□ -1.35
ZNF560-201ENST00000301480 ZMYND15Q9H091 742 aa6.62□□□□□ -1.35
ZNF560-201ENST00000301480 ARHGEF12Q9NZN5 1544 aa6.62□□□□□ -1.35
ZNF560-201ENST00000301480 FBXO41Q8TF61 875 aa6.61□□□□□ -1.35
ZNF560-201ENST00000301480 ARID4BQ4LE39 1312 aaPredicted RBP6.61□□□□□ -1.35
ZNF560-201ENST00000301480 PLEKHH2Q8IVE3 1493 aa6.61□□□□□ -1.35
ZNF560-201ENST00000301480 FYCO1Q9BQS8 1478 aa6.61□□□□□ -1.35
ZNF560-201ENST00000301480 ERICH6BQ5W0A0 696 aa6.61□□□□□ -1.35
ZNF560-201ENST00000301480 CNTLNQ9NXG0 1405 aa6.61□□□□□ -1.35
ZNF560-201ENST00000301480 MADDQ8WXG6 1647 aa6.6□□□□□ -1.35
ZNF560-201ENST00000301480 LMTK3Q96Q04 1460 aa6.6□□□□□ -1.35
ZNF560-201ENST00000301480 CDK13Q14004 1512 aaKnown RBP6.6□□□□□ -1.35
ZNF560-201ENST00000301480 KIAA1107Q9UPP5 1409 aa6.59□□□□□ -1.35
ZNF560-201ENST00000301480 CCDC9Q9Y3X0 531 aaKnown RBP6.59□□□□□ -1.35
ZNF560-201ENST00000301480 ARID3CA6NKF2 412 aa6.59□□□□□ -1.35
ZNF560-201ENST00000301480 ARHGAP5Q13017 1502 aa6.58□□□□□ -1.36
ZNF560-201ENST00000301480 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.58□□□□□ -1.36
ZNF560-201ENST00000301480 YEATS2Q9ULM3 1422 aa6.57□□□□□ -1.36
ZNF560-201ENST00000301480 FAM135AQ9P2D6 1515 aa6.57□□□□□ -1.36
ZNF560-201ENST00000301480 PREX2Q70Z35 1606 aa6.57□□□□□ -1.36
ZNF560-201ENST00000301480 ABCC1P33527 1531 aa6.57□□□□□ -1.36
ZNF560-201ENST00000301480 NPATQ14207 1427 aa6.56□□□□□ -1.36
ZNF560-201ENST00000301480 RIMS1Q86UR5 1692 aaKnown RBP6.56□□□□□ -1.36
ZNF560-201ENST00000301480 HMGB1P09429 215 aaKnown RBP6.56□□□□□ -1.36
ZNF560-201ENST00000301480 IQSEC2Q5JU85 1478 aa6.56□□□□□ -1.36
ZNF560-201ENST00000301480 PTPRTO14522 1441 aa6.55□□□□□ -1.36
ZNF560-201ENST00000301480 ZBTB22O15209 634 aa6.55□□□□□ -1.36
ZNF560-201ENST00000301480 CHRDL2Q6WN34 429 aa6.55□□□□□ -1.36
ZNF560-201ENST00000301480 PUS7Q96PZ0 661 aaKnown RBP6.55□□□□□ -1.36
ZNF560-201ENST00000301480 FER1L4A9Z1Z3 1794 aa6.55□□□□□ -1.36
ZNF560-201ENST00000301480 TMED8Q6PL24 325 aaPredicted RBP6.55□□□□□ -1.36
ZNF560-201ENST00000301480 PREX1Q8TCU6 1659 aa6.55□□□□□ -1.36
ZNF560-201ENST00000301480 DIP2CQ9Y2E4 1556 aa6.55□□□□□ -1.36
ZNF560-201ENST00000301480 SETD1BQ9UPS6 1966 aaKnown RBP6.54□□□□□ -1.36
ZNF560-201ENST00000301480 ABCB7O75027 752 aa6.54□□□□□ -1.36
ZNF560-201ENST00000301480 NEUROD1Q13562 356 aa6.54□□□□□ -1.36
ZNF560-201ENST00000301480 ZFP91Q96JP5 570 aaPredicted RBP6.54□□□□□ -1.36
ZNF560-201ENST00000301480 PRDM10Q9NQV6 1147 aa6.54□□□□□ -1.36
ZNF560-201ENST00000301480 UHRF1BP1Q6BDS2 1440 aa6.54□□□□□ -1.36
ZNF560-201ENST00000301480 ZNF592Q92610 1267 aa6.54□□□□□ -1.36
ZNF560-201ENST00000301480 ESF1Q9H501 851 aaKnown RBP6.54□□□□□ -1.36
ZNF560-201ENST00000301480 ITSN2Q9NZM3 1697 aa6.54□□□□□ -1.36
ZNF560-201ENST00000301480 RTEL1-TNFRSF6BF6WH68 1400 aa6.54□□□□□ -1.36
ZNF560-201ENST00000301480 TRAPPC8Q9Y2L5 1435 aa6.54□□□□□ -1.36
ZNF560-201ENST00000301480 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.53□□□□□ -1.36
ZNF560-201ENST00000301480 MROH2AA6NES4 1674 aa6.53□□□□□ -1.36
ZNF560-201ENST00000301480 CDC42BPBQ9Y5S2 1711 aa6.53□□□□□ -1.36
ZNF560-201ENST00000301480 GPATCH8Q9UKJ3 1502 aaKnown RBP6.53□□□□□ -1.36
ZNF560-201ENST00000301480 SP7Q8TDD2 431 aaPredicted RBP6.53□□□□□ -1.36
ZNF560-201ENST00000301480 ATP1B4Q9UN42 357 aaPredicted RBP6.53□□□□□ -1.36
ZNF560-201ENST00000301480 CEP162Q5TB80 1403 aa6.52□□□□□ -1.37
ZNF560-201ENST00000301480 NAP1L2Q9ULW6 460 aaPredicted RBP6.52□□□□□ -1.37
ZNF560-201ENST00000301480 EHBP1L1Q8N3D4 1523 aa6.52□□□□□ -1.37
ZNF560-201ENST00000301480 SAMD9LQ8IVG5 1584 aa6.51□□□□□ -1.37
ZNF560-201ENST00000301480 SPAG9O60271 1321 aaKnown RBP6.51□□□□□ -1.37
ZNF560-201ENST00000301480 AFAP1Q8N556 730 aa6.51□□□□□ -1.37
ZNF560-201ENST00000301480 CCNB3Q8WWL7 1395 aa6.51□□□□□ -1.37
ZNF560-201ENST00000301480 ABCA6Q8N139 1617 aa6.51□□□□□ -1.37
ZNF560-201ENST00000301480 GLIPR1L2Q4G1C9 344 aa6.51□□□□□ -1.37
ZNF560-201ENST00000301480 CNPY4Q8N129 248 aa6.51□□□□□ -1.37
ZNF560-201ENST00000301480 PLXNC1O60486 1568 aa6.5□□□□□ -1.37
ZNF560-201ENST00000301480 PLA2R1Q13018 1463 aa6.5□□□□□ -1.37
ZNF560-201ENST00000301480 CERKQ8TCT0 537 aa6.5□□□□□ -1.37
ZNF560-201ENST00000301480 CDC42BPAQ5VT25 1732 aa6.5□□□□□ -1.37
ZNF560-201ENST00000301480 KIDINS220Q9ULH0 1771 aa6.5□□□□□ -1.37
ZNF560-201ENST00000301480 MTUS2Q5JR59 1369 aa6.5□□□□□ -1.37
ZNF560-201ENST00000301480 TICAM2Q86XR7 235 aa6.5□□□□□ -1.37
ZNF560-201ENST00000301480 NECTIN2Q92692 538 aa6.5□□□□□ -1.37
ZNF560-201ENST00000301480 CFDP1Q9UEE9 299 aaPredicted RBP6.5□□□□□ -1.37
ZNF560-201ENST00000301480 MAP3K1Q13233 1512 aa6.5□□□□□ -1.37
ZNF560-201ENST00000301480 INO80Q9ULG1 1556 aaPredicted RBP6.49□□□□□ -1.37
ZNF560-201ENST00000301480 A2MP01023 1474 aa6.49□□□□□ -1.37
ZNF560-201ENST00000301480 LRRIQ1Q96JM4 1722 aa6.49□□□□□ -1.37
ZNF560-201ENST00000301480 SIGLEC1Q9BZZ2 1709 aa6.49□□□□□ -1.37
ZNF560-201ENST00000301480 PKD2Q13563 968 aa6.49□□□□□ -1.37
ZNF560-201ENST00000301480 ATP7AQ04656 1500 aa6.49□□□□□ -1.37
ZNF560-201ENST00000301480 ADGBQ8N7X0 1667 aa6.48□□□□□ -1.37
ZNF560-201ENST00000301480 ARID3AQ99856 593 aa6.48□□□□□ -1.37
ZNF560-201ENST00000301480 MYT1LQ9UL68 1186 aa6.48□□□□□ -1.37
ZNF560-201ENST00000301480 NCOA1Q15788 1441 aa6.48□□□□□ -1.37
ZNF560-201ENST00000301480 ZNF428Q96B54 188 aa6.48□□□□□ -1.37
ZNF560-201ENST00000301480 MLECQ14165 292 aa6.47□□□□□ -1.37
ZNF560-201ENST00000301480 C3P01024 1663 aa6.47□□□□□ -1.37
ZNF560-201ENST00000301480 ZMYM3Q14202 1370 aa6.47□□□□□ -1.37
ZNF560-201ENST00000301480 DHX29Q7Z478 1369 aaKnown RBP6.47□□□□□ -1.37
ZNF560-201ENST00000301480 SOCS7O14512 581 aa6.47□□□□□ -1.37
ZNF560-201ENST00000301480 CHMP4BQ9H444 224 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms