RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CENPQQ7L2Z9 268 aaPredicted RBP18.32■□□□□ 0.52
SCN3B-201ENST00000299333 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
SCN3B-201ENST00000299333 H3BQV1 296 aa18.31■□□□□ 0.52
SCN3B-201ENST00000299333 GORABQ5T7V8 394 aa18.31■□□□□ 0.52
SCN3B-201ENST00000299333 IFFO2Q5TF58 517 aa18.31■□□□□ 0.52
SCN3B-201ENST00000299333 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
SCN3B-201ENST00000299333 SLC4A10Q6U841 1118 aa18.3■□□□□ 0.52
SCN3B-201ENST00000299333 FOXD1Q16676 465 aa18.3■□□□□ 0.52
SCN3B-201ENST00000299333 HOMER1Q86YM7 354 aa18.29■□□□□ 0.52
SCN3B-201ENST00000299333 R3HCC1Q9Y3T6 440 aaKnown RBP18.29■□□□□ 0.52
SCN3B-201ENST00000299333 EXOC6Q8TAG9 804 aa18.29■□□□□ 0.52
SCN3B-201ENST00000299333 PLIN1O60240 522 aa18.29■□□□□ 0.52
SCN3B-201ENST00000299333 STK11IPQ8N1F8 1099 aa18.29■□□□□ 0.52
SCN3B-201ENST00000299333 BCL11BQ9C0K0 894 aaPredicted RBP18.29■□□□□ 0.52
SCN3B-201ENST00000299333 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
SCN3B-201ENST00000299333 ATP6V1DQ9Y5K8 247 aa18.28■□□□□ 0.52
SCN3B-201ENST00000299333 SETD5Q9C0A6 1442 aa18.28■□□□□ 0.52
SCN3B-201ENST00000299333 PDE3BQ13370 1112 aa18.28■□□□□ 0.52
SCN3B-201ENST00000299333 STK31Q9BXU1 1019 aa18.28■□□□□ 0.52
SCN3B-201ENST00000299333 KIF3AQ9Y496 699 aa18.28■□□□□ 0.52
SCN3B-201ENST00000299333 CHMP3Q9Y3E7 222 aa18.28■□□□□ 0.52
SCN3B-201ENST00000299333 TPM1P09493 284 aa18.27■□□□□ 0.52
SCN3B-201ENST00000299333 ZNF330Q9Y3S2 320 aaPredicted RBP18.27■□□□□ 0.52
SCN3B-201ENST00000299333 RRP12Q5JTH9 1297 aaKnown RBP18.27■□□□□ 0.51
SCN3B-201ENST00000299333 MEX3CQ5U5Q3 659 aaKnown RBP18.27■□□□□ 0.51
SCN3B-201ENST00000299333 FAM184AQ8NB25 1140 aa18.25■□□□□ 0.51
SCN3B-201ENST00000299333 RILPL2Q969X0 211 aa18.24■□□□□ 0.51
SCN3B-201ENST00000299333 TOMM22Q9NS69 142 aa18.24■□□□□ 0.51
SCN3B-201ENST00000299333 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
SCN3B-201ENST00000299333 ANKRD45Q5TZF3 282 aa18.23■□□□□ 0.51
SCN3B-201ENST00000299333 ROCK2O75116 1388 aaKnown RBP18.23■□□□□ 0.51
SCN3B-201ENST00000299333 CRBNQ96SW2 442 aa18.23■□□□□ 0.51
SCN3B-201ENST00000299333 CHMP5Q9NZZ3 219 aa18.23■□□□□ 0.51
SCN3B-201ENST00000299333 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.23■□□□□ 0.51
SCN3B-201ENST00000299333 CCDC66A2RUB6 948 aa18.23■□□□□ 0.51
SCN3B-201ENST00000299333 IFT57Q9NWB7 429 aa18.22■□□□□ 0.51
SCN3B-201ENST00000299333 VPS8Q8N3P4 1428 aa18.22■□□□□ 0.51
SCN3B-201ENST00000299333 ARGLU1Q9NWB6 273 aaPredicted RBP18.22■□□□□ 0.51
SCN3B-201ENST00000299333 STK26Q9P289 416 aa18.21■□□□□ 0.51
SCN3B-201ENST00000299333 NFKBIBQ15653 356 aa18.21■□□□□ 0.51
SCN3B-201ENST00000299333 RRP1P56182 461 aaKnown RBP18.21■□□□□ 0.51
SCN3B-201ENST00000299333 MCTP1Q6DN14 999 aa18.21■□□□□ 0.51
SCN3B-201ENST00000299333 PKD2Q13563 968 aa18.2■□□□□ 0.5
SCN3B-201ENST00000299333 NLRP13Q86W25 1043 aa18.2■□□□□ 0.5
SCN3B-201ENST00000299333 MNS1Q8NEH6 495 aa18.2■□□□□ 0.5
SCN3B-201ENST00000299333 MAP7D2Q96T17 732 aa18.2■□□□□ 0.5
SCN3B-201ENST00000299333 FBXO3Q9UK99 471 aa18.2■□□□□ 0.5
SCN3B-201ENST00000299333 RDXP35241 583 aaKnown RBP18.2■□□□□ 0.5
SCN3B-201ENST00000299333 HSP90AB3PQ58FF7 597 aa18.2■□□□□ 0.5
SCN3B-201ENST00000299333 BRPF3Q9ULD4 1205 aa18.19■□□□□ 0.5
SCN3B-201ENST00000299333 MARCH6O60337 910 aa18.19■□□□□ 0.5
SCN3B-201ENST00000299333 TPM2P07951 284 aa18.19■□□□□ 0.5
SCN3B-201ENST00000299333 BCL2L13Q9BXK5 485 aa18.19■□□□□ 0.5
SCN3B-201ENST00000299333 MTERF4Q7Z6M4 381 aaKnown RBP18.19■□□□□ 0.5
SCN3B-201ENST00000299333 IL27Q8NEV9 243 aa18.18■□□□□ 0.5
SCN3B-201ENST00000299333 SPAG9O60271 1321 aaKnown RBP18.18■□□□□ 0.5
SCN3B-201ENST00000299333 IPO7O95373 1038 aaKnown RBP18.18■□□□□ 0.5
SCN3B-201ENST00000299333 RUFY1Q96T51 708 aa18.17■□□□□ 0.5
SCN3B-201ENST00000299333 WWC1Q8IX03 1113 aa18.17■□□□□ 0.5
SCN3B-201ENST00000299333 PCMTD1Q96MG8 357 aaPredicted RBP18.17■□□□□ 0.5
SCN3B-201ENST00000299333 RBM10P98175 930 aaKnown RBP18.17■□□□□ 0.5
SCN3B-201ENST00000299333 PLCD4Q9BRC7 762 aa18.17■□□□□ 0.5
SCN3B-201ENST00000299333 HSP90B2PQ58FF3 399 aa18.16■□□□□ 0.5
SCN3B-201ENST00000299333 AK7Q96M32 723 aa18.16■□□□□ 0.5
SCN3B-201ENST00000299333 DIAPH3Q9NSV4 1193 aa18.16■□□□□ 0.5
SCN3B-201ENST00000299333 RRP7AQ9Y3A4 280 aaKnown RBP18.16■□□□□ 0.5
SCN3B-201ENST00000299333 VPS53Q5VIR6 699 aa18.15■□□□□ 0.5
SCN3B-201ENST00000299333 FBXW7Q969H0 707 aa18.15■□□□□ 0.5
SCN3B-201ENST00000299333 BICD2Q8TD16 824 aa18.15■□□□□ 0.5
SCN3B-201ENST00000299333 MRE11P49959 708 aa18.15■□□□□ 0.5
SCN3B-201ENST00000299333 H0YHG0 523 aa18.15■□□□□ 0.5
SCN3B-201ENST00000299333 ACBD3Q9H3P7 528 aa18.15■□□□□ 0.5
SCN3B-201ENST00000299333 AEBP1Q8IUX7 1158 aa18.14■□□□□ 0.5
SCN3B-201ENST00000299333 CWC15Q9P013 229 aaKnown RBP18.14■□□□□ 0.5
SCN3B-201ENST00000299333 SOGA1O94964 1423 aa18.14■□□□□ 0.5
SCN3B-201ENST00000299333 HDAC5Q9UQL6 1122 aa18.14■□□□□ 0.49
SCN3B-201ENST00000299333 NASPP49321 788 aaPredicted RBP18.14■□□□□ 0.49
SCN3B-201ENST00000299333 COG6Q9Y2V7 657 aa18.14■□□□□ 0.49
SCN3B-201ENST00000299333 ARHGAP35Q9NRY4 1499 aa18.13■□□□□ 0.49
SCN3B-201ENST00000299333 CCDC39Q9UFE4 941 aa18.13■□□□□ 0.49
SCN3B-201ENST00000299333 RAB3GAP2Q9H2M9 1393 aa18.13■□□□□ 0.49
SCN3B-201ENST00000299333 KANK1Q14678 1352 aa18.13■□□□□ 0.49
SCN3B-201ENST00000299333 CCDC9Q9Y3X0 531 aaKnown RBP18.12■□□□□ 0.49
SCN3B-201ENST00000299333 SASS6Q6UVJ0 657 aa18.11■□□□□ 0.49
SCN3B-201ENST00000299333 CCDC191Q8NCU4 936 aa18.1■□□□□ 0.49
SCN3B-201ENST00000299333 CHMP4AQ9BY43 222 aa18.1■□□□□ 0.49
SCN3B-201ENST00000299333 PAK3O75914 559 aaPredicted RBP18.1■□□□□ 0.49
SCN3B-201ENST00000299333 MPHOSPH9Q99550 1183 aa18.1■□□□□ 0.49
SCN3B-201ENST00000299333 CDR1P51861 262 aa18.09■□□□□ 0.49
SCN3B-201ENST00000299333 RNF214Q8ND24 703 aa18.09■□□□□ 0.49
SCN3B-201ENST00000299333 ELL2O00472 640 aaPredicted RBP18.09■□□□□ 0.49
SCN3B-201ENST00000299333 ZKSCAN2Q63HK3 967 aa18.09■□□□□ 0.49
SCN3B-201ENST00000299333 ANKRD20A12PQ8NF67 263 aa18.09■□□□□ 0.49
SCN3B-201ENST00000299333 ZBED9Q6R2W3 1325 aa18.08■□□□□ 0.49
SCN3B-201ENST00000299333 PHLDB1Q86UU1 1377 aa18.08■□□□□ 0.49
SCN3B-201ENST00000299333 REC8O95072 547 aa18.08■□□□□ 0.48
SCN3B-201ENST00000299333 CARMIL1Q5VZK9 1371 aa18.08■□□□□ 0.48
SCN3B-201ENST00000299333 AKAP17AQ02040 695 aaKnown RBP18.08■□□□□ 0.48
SCN3B-201ENST00000299333 VPS37CA5D8V6 355 aaPredicted RBP18.07■□□□□ 0.48
SCN3B-201ENST00000299333 MYBBP1AQ9BQG0 1328 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms