RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 CUL7Q14999 1698 aa14.75□□□□□ -0.05
TRUB1-201ENST00000298746 TCOF1Q13428 1488 aaKnown RBP14.75□□□□□ -0.05
TRUB1-201ENST00000298746 NBPF1Q3BBV0 1214 aa14.75□□□□□ -0.05
TRUB1-201ENST00000298746 ROCK1Q13464 1354 aa14.75□□□□□ -0.05
TRUB1-201ENST00000298746 GOLGA2Q08379 1002 aa14.75□□□□□ -0.05
TRUB1-201ENST00000298746 DNMBPQ6XZF7 1577 aa14.75□□□□□ -0.05
TRUB1-201ENST00000298746 UBE2Q2Q8WVN8 375 aa14.74□□□□□ -0.05
TRUB1-201ENST00000298746 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
TRUB1-201ENST00000298746 GCC2Q8IWJ2 1684 aa14.73□□□□□ -0.05
TRUB1-201ENST00000298746 TMF1P82094 1093 aa14.73□□□□□ -0.05
TRUB1-201ENST00000298746 POGKQ9P215 609 aa14.73□□□□□ -0.05
TRUB1-201ENST00000298746 NEUROD2Q15784 382 aa14.72□□□□□ -0.05
TRUB1-201ENST00000298746 THOC2Q8NI27 1593 aaKnown RBP14.71□□□□□ -0.06
TRUB1-201ENST00000298746 ANKRD50Q9ULJ7 1429 aa14.7□□□□□ -0.06
TRUB1-201ENST00000298746 C8orf34Q49A92 452 aa14.7□□□□□ -0.06
TRUB1-201ENST00000298746 GLIPR1L2Q4G1C9 344 aa14.7□□□□□ -0.06
TRUB1-201ENST00000298746 FAM43AQ8N2R8 423 aa14.7□□□□□ -0.06
TRUB1-201ENST00000298746 PLEKHD1A6NEE1 506 aa14.69□□□□□ -0.06
TRUB1-201ENST00000298746 BCORL1Q5H9F3 1711 aa14.69□□□□□ -0.06
TRUB1-201ENST00000298746 HNRNPMP52272 730 aaKnown RBP eCLIP14.68□□□□□ -0.06
TRUB1-201ENST00000298746 L1TD1Q5T7N2 865 aaKnown RBP14.68□□□□□ -0.06
TRUB1-201ENST00000298746 PRDM2Q13029 1718 aa14.67□□□□□ -0.06
TRUB1-201ENST00000298746 BCAR3O75815 825 aa14.67□□□□□ -0.06
TRUB1-201ENST00000298746 PZPP20742 1482 aa14.66□□□□□ -0.06
TRUB1-201ENST00000298746 LRRIQ1Q96JM4 1722 aa14.66□□□□□ -0.06
TRUB1-201ENST00000298746 APAF1O14727 1248 aa14.66□□□□□ -0.06
TRUB1-201ENST00000298746 PRG4Q92954 1404 aaPredicted RBP14.66□□□□□ -0.06
TRUB1-201ENST00000298746 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
TRUB1-201ENST00000298746 COG6Q9Y2V7 657 aa14.66□□□□□ -0.06
TRUB1-201ENST00000298746 PNNQ9H307 717 aaKnown RBP14.65□□□□□ -0.06
TRUB1-201ENST00000298746 SAMD9Q5K651 1589 aa14.65□□□□□ -0.06
TRUB1-201ENST00000298746 DUSP27Q5VZP5 1158 aa14.64□□□□□ -0.07
TRUB1-201ENST00000298746 PARD3Q8TEW0 1356 aa14.64□□□□□ -0.07
TRUB1-201ENST00000298746 ABCA5Q8WWZ7 1642 aa14.63□□□□□ -0.07
TRUB1-201ENST00000298746 ARHGEF11O15085 1522 aa14.63□□□□□ -0.07
TRUB1-201ENST00000298746 PER1O15534 1290 aaPredicted RBP14.63□□□□□ -0.07
TRUB1-201ENST00000298746 KDM2BQ8NHM5 1336 aa14.63□□□□□ -0.07
TRUB1-201ENST00000298746 GOLGA6L3A6NEY3 463 aa14.63□□□□□ -0.07
TRUB1-201ENST00000298746 PANK1Q8TE04 598 aa14.62□□□□□ -0.07
TRUB1-201ENST00000298746 RALGAPBQ86X10 1494 aa14.62□□□□□ -0.07
TRUB1-201ENST00000298746 TNNT2P45379 298 aaPredicted RBP14.61□□□□□ -0.07
TRUB1-201ENST00000298746 CLUAP1Q96AJ1 413 aa14.61□□□□□ -0.07
TRUB1-201ENST00000298746 CCDC144AA2RUR9 1427 aa14.61□□□□□ -0.07
TRUB1-201ENST00000298746 PPP2R1AP30153 589 aa14.6□□□□□ -0.07
TRUB1-201ENST00000298746 VSIG10Q8N0Z9 540 aa14.6□□□□□ -0.07
TRUB1-201ENST00000298746 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
TRUB1-201ENST00000298746 BCL2L13Q9BXK5 485 aa14.6□□□□□ -0.07
TRUB1-201ENST00000298746 SEC24BO95487 1268 aa14.59□□□□□ -0.07
TRUB1-201ENST00000298746 KDM5CP41229 1560 aa14.59□□□□□ -0.07
TRUB1-201ENST00000298746 URB2Q14146 1524 aaKnown RBP14.59□□□□□ -0.07
TRUB1-201ENST00000298746 IGHDP01880 384 aa14.59□□□□□ -0.07
TRUB1-201ENST00000298746 CAMSAP2Q08AD1 1489 aa14.59□□□□□ -0.07
TRUB1-201ENST00000298746 DISP3Q9P2K9 1392 aa14.58□□□□□ -0.08
TRUB1-201ENST00000298746 CENPJQ9HC77 1338 aaPredicted RBP14.57□□□□□ -0.08
TRUB1-201ENST00000298746 PLEKHH1Q9ULM0 1364 aa14.57□□□□□ -0.08
TRUB1-201ENST00000298746 TRIM44Q96DX7 344 aaPredicted RBP14.57□□□□□ -0.08
TRUB1-201ENST00000298746 MAPK8IP3Q9UPT6 1336 aa14.57□□□□□ -0.08
TRUB1-201ENST00000298746 HSP90AA1P07900 732 aaKnown RBP14.57□□□□□ -0.08
TRUB1-201ENST00000298746 RRAGDQ9NQL2 400 aaPredicted RBP14.57□□□□□ -0.08
TRUB1-201ENST00000298746 IQGAP2Q13576 1575 aa14.56□□□□□ -0.08
TRUB1-201ENST00000298746 KIF14Q15058 1648 aa14.56□□□□□ -0.08
TRUB1-201ENST00000298746 SLFN5Q08AF3 891 aa14.56□□□□□ -0.08
TRUB1-201ENST00000298746 RRP7AQ9Y3A4 280 aaKnown RBP14.56□□□□□ -0.08
TRUB1-201ENST00000298746 DNMT1P26358 1616 aaKnown RBP14.56□□□□□ -0.08
TRUB1-201ENST00000298746 MFAP1P55081 439 aaKnown RBP14.56□□□□□ -0.08
TRUB1-201ENST00000298746 POLR1AO95602 1720 aaPredicted RBP14.55□□□□□ -0.08
TRUB1-201ENST00000298746 HSP90AA2PQ14568 343 aaPredicted RBP14.55□□□□□ -0.08
TRUB1-201ENST00000298746 CGNL1Q0VF96 1302 aa14.55□□□□□ -0.08
TRUB1-201ENST00000298746 MBD5Q9P267 1494 aa14.54□□□□□ -0.08
TRUB1-201ENST00000298746 CDCA8Q53HL2 280 aa14.54□□□□□ -0.08
TRUB1-201ENST00000298746 E9PSI1 815 aa14.54□□□□□ -0.08
TRUB1-201ENST00000298746 TROQ12816 1431 aaPredicted RBP14.54□□□□□ -0.08
TRUB1-201ENST00000298746 LAMC3Q9Y6N6 1575 aa14.53□□□□□ -0.08
TRUB1-201ENST00000298746 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
TRUB1-201ENST00000298746 UHRF1BP1Q6BDS2 1440 aa14.53□□□□□ -0.08
TRUB1-201ENST00000298746 C9orf84Q5VXU9 1444 aa14.53□□□□□ -0.08
TRUB1-201ENST00000298746 PANK2Q9BZ23 570 aa14.52□□□□□ -0.08
TRUB1-201ENST00000298746 ERBINQ96RT1 1412 aa14.52□□□□□ -0.09
TRUB1-201ENST00000298746 TESK2Q96S53 571 aa14.52□□□□□ -0.09
TRUB1-201ENST00000298746 MYH16Q9H6N6 1097 aa14.52□□□□□ -0.09
TRUB1-201ENST00000298746 KIAA0586Q9BVV6 1533 aa14.52□□□□□ -0.09
TRUB1-201ENST00000298746 WDR62O43379 1518 aa14.51□□□□□ -0.09
TRUB1-201ENST00000298746 FTSJ3Q8IY81 847 aaKnown RBP14.51□□□□□ -0.09
TRUB1-201ENST00000298746 PMFBP1Q8TBY8 1022 aa14.51□□□□□ -0.09
TRUB1-201ENST00000298746 PKNOX2Q96KN3 472 aa14.5□□□□□ -0.09
TRUB1-201ENST00000298746 TBC1D2Q9BYX2 928 aa14.5□□□□□ -0.09
TRUB1-201ENST00000298746 XRCC6P12956 609 aaKnown RBP eCLIP14.49□□□□□ -0.09
TRUB1-201ENST00000298746 HSCBQ8IWL3 235 aa14.49□□□□□ -0.09
TRUB1-201ENST00000298746 NUP153P49790 1475 aaKnown RBP14.49□□□□□ -0.09
TRUB1-201ENST00000298746 GPATCH8Q9UKJ3 1502 aaKnown RBP14.49□□□□□ -0.09
TRUB1-201ENST00000298746 PLEKHH2Q8IVE3 1493 aa14.49□□□□□ -0.09
TRUB1-201ENST00000298746 BLMP54132 1417 aaPredicted RBP14.49□□□□□ -0.09
TRUB1-201ENST00000298746 TRAK2O60296 914 aa14.48□□□□□ -0.09
TRUB1-201ENST00000298746 PDZRN3Q9UPQ7 1066 aa14.48□□□□□ -0.09
TRUB1-201ENST00000298746 RWDD1Q9H446 243 aaPredicted RBP14.48□□□□□ -0.09
TRUB1-201ENST00000298746 MCM4P33991 863 aa14.48□□□□□ -0.09
TRUB1-201ENST00000298746 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
TRUB1-201ENST00000298746 FOXD4L1Q9NU39 408 aa14.47□□□□□ -0.09
TRUB1-201ENST00000298746 ZMYM4Q5VZL5 1548 aa14.46□□□□□ -0.09
TRUB1-201ENST00000298746 PDE3AQ14432 1141 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms