RNA–Protein interactions for RNA: ENST00000297598.4

PDP1-201, Transcript of pyruvate dehyrogenase phosphatase catalytic subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDP1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDP1-201ENST00000297598 PANK1Q8TE04 598 aa19.62■□□□□ 0.73
PDP1-201ENST00000297598 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
PDP1-201ENST00000297598 MYH16Q9H6N6 1097 aa19.62■□□□□ 0.73
PDP1-201ENST00000297598 BRD4O60885 1362 aaPredicted RBP19.61■□□□□ 0.73
PDP1-201ENST00000297598 ITPRIPQ8IWB1 547 aa19.61■□□□□ 0.73
PDP1-201ENST00000297598 HSCBQ8IWL3 235 aa19.61■□□□□ 0.73
PDP1-201ENST00000297598 STK26Q9P289 416 aa19.59■□□□□ 0.73
PDP1-201ENST00000297598 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.59■□□□□ 0.73
PDP1-201ENST00000297598 APBB1O00213 710 aa19.59■□□□□ 0.73
PDP1-201ENST00000297598 ZBTB7CA1YPR0 619 aa19.59■□□□□ 0.73
PDP1-201ENST00000297598 BCAR3O75815 825 aa19.59■□□□□ 0.73
PDP1-201ENST00000297598 ANKRD50Q9ULJ7 1429 aa19.59■□□□□ 0.73
PDP1-201ENST00000297598 L1TD1Q5T7N2 865 aaKnown RBP19.59■□□□□ 0.73
PDP1-201ENST00000297598 ANKRD30BQ9BXX2 1392 aa19.58■□□□□ 0.73
PDP1-201ENST00000297598 NCOA1Q15788 1441 aa19.58■□□□□ 0.72
PDP1-201ENST00000297598 GOLGA6L22H0YM25 854 aa19.57■□□□□ 0.72
PDP1-201ENST00000297598 RWDD1Q9H446 243 aaPredicted RBP19.57■□□□□ 0.72
PDP1-201ENST00000297598 PNNQ9H307 717 aaKnown RBP19.56■□□□□ 0.72
PDP1-201ENST00000297598 TRAK1Q9UPV9 953 aa19.56■□□□□ 0.72
PDP1-201ENST00000297598 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
PDP1-201ENST00000297598 GGT6Q6P531 493 aa19.55■□□□□ 0.72
PDP1-201ENST00000297598 SMC4Q9NTJ3 1288 aa19.55■□□□□ 0.72
PDP1-201ENST00000297598 GOLGA6L3A6NEY3 463 aa19.54■□□□□ 0.72
PDP1-201ENST00000297598 KIF3BO15066 747 aa19.54■□□□□ 0.72
PDP1-201ENST00000297598 SRPK2P78362 688 aaKnown RBP19.54■□□□□ 0.72
PDP1-201ENST00000297598 ARID3AQ99856 593 aa19.54■□□□□ 0.72
PDP1-201ENST00000297598 CDK13Q14004 1512 aaKnown RBP19.53■□□□□ 0.72
PDP1-201ENST00000297598 PLEKHG5O94827 1062 aa19.53■□□□□ 0.72
PDP1-201ENST00000297598 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
PDP1-201ENST00000297598 CARMIL2Q6F5E8 1435 aa19.52■□□□□ 0.72
PDP1-201ENST00000297598 PRG4Q92954 1404 aaPredicted RBP19.52■□□□□ 0.71
PDP1-201ENST00000297598 NPM1P06748 294 aaKnown RBP eCLIP19.52■□□□□ 0.71
PDP1-201ENST00000297598 PMFBP1Q8TBY8 1022 aa19.51■□□□□ 0.71
PDP1-201ENST00000297598 MAP3K1Q13233 1512 aa19.5■□□□□ 0.71
PDP1-201ENST00000297598 POGKQ9P215 609 aa19.5■□□□□ 0.71
PDP1-201ENST00000297598 E9PSI1 815 aa19.5■□□□□ 0.71
PDP1-201ENST00000297598 ELL2O00472 640 aaPredicted RBP19.49■□□□□ 0.71
PDP1-201ENST00000297598 PPP2R1AP30153 589 aa19.49■□□□□ 0.71
PDP1-201ENST00000297598 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
PDP1-201ENST00000297598 PTPN23Q9H3S7 1636 aa19.48■□□□□ 0.71
PDP1-201ENST00000297598 DAPK1P53355 1430 aa19.47■□□□□ 0.71
PDP1-201ENST00000297598 KIAA1107Q9UPP5 1409 aa19.47■□□□□ 0.71
PDP1-201ENST00000297598 TOPBP1Q92547 1522 aa19.47■□□□□ 0.71
PDP1-201ENST00000297598 EFCAB5A4FU69 1503 aa19.47■□□□□ 0.71
PDP1-201ENST00000297598 UNC13AQ9UPW8 1703 aa19.47■□□□□ 0.71
PDP1-201ENST00000297598 SOX12O15370 315 aa19.47■□□□□ 0.71
PDP1-201ENST00000297598 CGNL1Q0VF96 1302 aa19.45■□□□□ 0.7
PDP1-201ENST00000297598 PTMAP06454 111 aaKnown RBP19.45■□□□□ 0.7
PDP1-201ENST00000297598 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
PDP1-201ENST00000297598 PRDM2Q13029 1718 aa19.45■□□□□ 0.7
PDP1-201ENST00000297598 PLCB2Q00722 1185 aa19.45■□□□□ 0.7
PDP1-201ENST00000297598 EFCAB2Q5VUJ9 269 aa19.45■□□□□ 0.7
PDP1-201ENST00000297598 BIVM-ERCC5R4GMW8 1640 aa19.44■□□□□ 0.7
PDP1-201ENST00000297598 EHBP1L1Q8N3D4 1523 aa19.43■□□□□ 0.7
PDP1-201ENST00000297598 DNTTIP2Q5QJE6 756 aaKnown RBP19.43■□□□□ 0.7
PDP1-201ENST00000297598 MIA2Q96PC5 1412 aa19.42■□□□□ 0.7
PDP1-201ENST00000297598 ABCC5O15440 1437 aa19.4■□□□□ 0.7
PDP1-201ENST00000297598 EPRSP07814 1512 aaKnown RBP19.4■□□□□ 0.7
PDP1-201ENST00000297598 RPRD2Q5VT52 1461 aaKnown RBP19.39■□□□□ 0.69
PDP1-201ENST00000297598 FOXD4L5Q5VV16 416 aaPredicted RBP19.39■□□□□ 0.69
PDP1-201ENST00000297598 FOXD4L4Q8WXT5 416 aaPredicted RBP19.39■□□□□ 0.69
PDP1-201ENST00000297598 SPAG9O60271 1321 aaKnown RBP19.39■□□□□ 0.69
PDP1-201ENST00000297598 SUPT6HQ7KZ85 1726 aaKnown RBP19.39■□□□□ 0.69
PDP1-201ENST00000297598 HMGXB3Q12766 1538 aa19.38■□□□□ 0.69
PDP1-201ENST00000297598 CFAP70Q5T0N1 1121 aa19.38■□□□□ 0.69
PDP1-201ENST00000297598 RSPH4AQ5TD94 716 aa19.37■□□□□ 0.69
PDP1-201ENST00000297598 GBP4Q96PP9 640 aa19.36■□□□□ 0.69
PDP1-201ENST00000297598 LNPKQ9C0E8 428 aa19.36■□□□□ 0.69
PDP1-201ENST00000297598 RSPH6AQ9H0K4 717 aa19.36■□□□□ 0.69
PDP1-201ENST00000297598 KANK1Q14678 1352 aa19.36■□□□□ 0.69
PDP1-201ENST00000297598 TCP11L2Q8N4U5 519 aa19.36■□□□□ 0.69
PDP1-201ENST00000297598 ANKRD45Q5TZF3 282 aa19.35■□□□□ 0.69
PDP1-201ENST00000297598 ZKSCAN2Q63HK3 967 aa19.35■□□□□ 0.69
PDP1-201ENST00000297598 IPO8O15397 1037 aaKnown RBP19.35■□□□□ 0.69
PDP1-201ENST00000297598 MSNP26038 577 aaKnown RBP19.35■□□□□ 0.69
PDP1-201ENST00000297598 PDZRN3Q9UPQ7 1066 aa19.35■□□□□ 0.69
PDP1-201ENST00000297598 TMEM132EQ6IEE7 984 aa19.34■□□□□ 0.69
PDP1-201ENST00000297598 ESF1Q9H501 851 aaKnown RBP19.34■□□□□ 0.69
PDP1-201ENST00000297598 NOL8Q76FK4 1167 aaKnown RBP19.34■□□□□ 0.69
PDP1-201ENST00000297598 VSIG10Q8N0Z9 540 aa19.32■□□□□ 0.68
PDP1-201ENST00000297598 C22orf23Q9BZE7 217 aa19.32■□□□□ 0.68
PDP1-201ENST00000297598 MTHFSP49914 203 aa19.32■□□□□ 0.68
PDP1-201ENST00000297598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.32■□□□□ 0.68
PDP1-201ENST00000297598 DZIP1LQ8IYY4 767 aaKnown RBP19.32■□□□□ 0.68
PDP1-201ENST00000297598 ABCA10Q8WWZ4 1543 aa19.31■□□□□ 0.68
PDP1-201ENST00000297598 AFAP1Q8N556 730 aa19.31■□□□□ 0.68
PDP1-201ENST00000297598 FOXD4L6Q3SYB3 417 aaPredicted RBP19.31■□□□□ 0.68
PDP1-201ENST00000297598 FOXD4L3Q6VB84 417 aaPredicted RBP19.31■□□□□ 0.68
PDP1-201ENST00000297598 CASC1Q6TDU7 716 aa19.31■□□□□ 0.68
PDP1-201ENST00000297598 TSR2Q969E8 191 aaKnown RBP19.3■□□□□ 0.68
PDP1-201ENST00000297598 PTPRGP23470 1445 aa19.3■□□□□ 0.68
PDP1-201ENST00000297598 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
PDP1-201ENST00000297598 SLC12A5Q9H2X9 1139 aa19.3■□□□□ 0.68
PDP1-201ENST00000297598 HSP90AA2PQ14568 343 aaPredicted RBP19.29■□□□□ 0.68
PDP1-201ENST00000297598 DUSP27Q5VZP5 1158 aa19.29■□□□□ 0.68
PDP1-201ENST00000297598 C9orf84Q5VXU9 1444 aa19.29■□□□□ 0.68
PDP1-201ENST00000297598 SLFN5Q08AF3 891 aa19.29■□□□□ 0.68
PDP1-201ENST00000297598 DHX29Q7Z478 1369 aaKnown RBP19.28■□□□□ 0.68
PDP1-201ENST00000297598 CHMP5Q9NZZ3 219 aa19.28■□□□□ 0.68
PDP1-201ENST00000297598 ROCK1Q13464 1354 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms