RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
SNIP1-201ENST00000296215 PSMD1Q99460 953 aa14.59□□□□□ -0.07
SNIP1-201ENST00000296215 NRDCO43847 1150 aa14.58□□□□□ -0.07
SNIP1-201ENST00000296215 DCAF11Q8TEB1 546 aa14.58□□□□□ -0.07
SNIP1-201ENST00000296215 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
SNIP1-201ENST00000296215 RALBP1Q15311 655 aa14.58□□□□□ -0.08
SNIP1-201ENST00000296215 CFAP44Q96MT7 982 aa14.58□□□□□ -0.08
SNIP1-201ENST00000296215 UTP14CQ5TAP6 766 aaKnown RBP14.58□□□□□ -0.08
SNIP1-201ENST00000296215 EXOC6Q8TAG9 804 aa14.57□□□□□ -0.08
SNIP1-201ENST00000296215 IGSF3O75054 1194 aa14.56□□□□□ -0.08
SNIP1-201ENST00000296215 XRCC6P12956 609 aaKnown RBP eCLIP14.56□□□□□ -0.08
SNIP1-201ENST00000296215 DMTNQ08495 405 aa14.56□□□□□ -0.08
SNIP1-201ENST00000296215 SYAP1Q96A49 352 aaPredicted RBP14.55□□□□□ -0.08
SNIP1-201ENST00000296215 GOLIM4O00461 696 aa14.54□□□□□ -0.08
SNIP1-201ENST00000296215 XPCQ01831 940 aaPredicted RBP14.54□□□□□ -0.08
SNIP1-201ENST00000296215 ZBED9Q6R2W3 1325 aa14.53□□□□□ -0.08
SNIP1-201ENST00000296215 CLSTN1O94985 981 aa14.53□□□□□ -0.08
SNIP1-201ENST00000296215 CTR9Q6PD62 1173 aa14.53□□□□□ -0.08
SNIP1-201ENST00000296215 RDXP35241 583 aaKnown RBP14.52□□□□□ -0.08
SNIP1-201ENST00000296215 TOMM22Q9NS69 142 aa14.52□□□□□ -0.08
SNIP1-201ENST00000296215 PANK2Q9BZ23 570 aa14.51□□□□□ -0.09
SNIP1-201ENST00000296215 OFD1O75665 1012 aa14.51□□□□□ -0.09
SNIP1-201ENST00000296215 HSP90AB3PQ58FF7 597 aa14.5□□□□□ -0.09
SNIP1-201ENST00000296215 ZNF592Q92610 1267 aa14.5□□□□□ -0.09
SNIP1-201ENST00000296215 MCM4P33991 863 aa14.49□□□□□ -0.09
SNIP1-201ENST00000296215 PAIP2Q9BPZ3 127 aaKnown RBP14.49□□□□□ -0.09
SNIP1-201ENST00000296215 SOX12O15370 315 aa14.49□□□□□ -0.09
SNIP1-201ENST00000296215 RBM28Q9NW13 759 aaKnown RBP14.49□□□□□ -0.09
SNIP1-201ENST00000296215 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.48□□□□□ -0.09
SNIP1-201ENST00000296215 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
SNIP1-201ENST00000296215 ZBTB12Q9Y330 459 aaPredicted RBP14.48□□□□□ -0.09
SNIP1-201ENST00000296215 CENPQQ7L2Z9 268 aaPredicted RBP14.48□□□□□ -0.09
SNIP1-201ENST00000296215 GIMAP7Q8NHV1 300 aa14.48□□□□□ -0.09
SNIP1-201ENST00000296215 USP8P40818 1118 aa14.47□□□□□ -0.09
SNIP1-201ENST00000296215 MYCBPQ99417 103 aaPredicted RBP14.47□□□□□ -0.09
SNIP1-201ENST00000296215 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
SNIP1-201ENST00000296215 FOXD4L1Q9NU39 408 aa14.46□□□□□ -0.09
SNIP1-201ENST00000296215 ZNF830Q96NB3 372 aaPredicted RBP14.46□□□□□ -0.09
SNIP1-201ENST00000296215 ARID4AP29374 1257 aaPredicted RBP14.46□□□□□ -0.09
SNIP1-201ENST00000296215 CEP162Q5TB80 1403 aa14.45□□□□□ -0.1
SNIP1-201ENST00000296215 MPHOSPH10O00566 681 aaKnown RBP14.45□□□□□ -0.1
SNIP1-201ENST00000296215 MFAP1P55081 439 aaKnown RBP14.45□□□□□ -0.1
SNIP1-201ENST00000296215 RRP1P56182 461 aaKnown RBP14.45□□□□□ -0.1
SNIP1-201ENST00000296215 LEKR1Q6ZMV7 388 aa14.45□□□□□ -0.1
SNIP1-201ENST00000296215 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.45□□□□□ -0.1
SNIP1-201ENST00000296215 TERF1P54274 439 aa14.44□□□□□ -0.1
SNIP1-201ENST00000296215 MNS1Q8NEH6 495 aa14.44□□□□□ -0.1
SNIP1-201ENST00000296215 PHF14O94880 888 aa14.44□□□□□ -0.1
SNIP1-201ENST00000296215 H0YHG0 523 aa14.43□□□□□ -0.1
SNIP1-201ENST00000296215 SARNPP82979 210 aaKnown RBP14.43□□□□□ -0.1
SNIP1-201ENST00000296215 ARGLU1Q9NWB6 273 aaPredicted RBP14.43□□□□□ -0.1
SNIP1-201ENST00000296215 AK7Q96M32 723 aa14.43□□□□□ -0.1
SNIP1-201ENST00000296215 GTF2F1P35269 517 aaKnown RBP eCLIP14.42□□□□□ -0.1
SNIP1-201ENST00000296215 RASSF4Q9H2L5 321 aa14.42□□□□□ -0.1
SNIP1-201ENST00000296215 ZRSR1Q15695 479 aaKnown RBP14.41□□□□□ -0.1
SNIP1-201ENST00000296215 MRVI1Q9Y6F6 885 aa14.41□□□□□ -0.1
SNIP1-201ENST00000296215 CT47A1Q5JQC4 288 aaPredicted RBP14.41□□□□□ -0.1
SNIP1-201ENST00000296215 SRPK2P78362 688 aaKnown RBP14.4□□□□□ -0.1
SNIP1-201ENST00000296215 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
SNIP1-201ENST00000296215 SLC4A1APQ9BWU0 796 aaKnown RBP14.4□□□□□ -0.1
SNIP1-201ENST00000296215 CCDC91Q7Z6B0 441 aa14.39□□□□□ -0.11
SNIP1-201ENST00000296215 TPM4P67936 248 aa14.38□□□□□ -0.11
SNIP1-201ENST00000296215 SLC26A8Q96RN1 970 aa14.38□□□□□ -0.11
SNIP1-201ENST00000296215 PRDM4Q9UKN5 801 aa14.38□□□□□ -0.11
SNIP1-201ENST00000296215 RNF214Q8ND24 703 aa14.38□□□□□ -0.11
SNIP1-201ENST00000296215 TMX1Q9H3N1 280 aa14.38□□□□□ -0.11
SNIP1-201ENST00000296215 PRIMPOLQ96LW4 560 aa14.38□□□□□ -0.11
SNIP1-201ENST00000296215 U2SURPO15042 1029 aaKnown RBP14.38□□□□□ -0.11
SNIP1-201ENST00000296215 RB1CC1Q8TDY2 1594 aa14.38□□□□□ -0.11
SNIP1-201ENST00000296215 IFT57Q9NWB7 429 aa14.37□□□□□ -0.11
SNIP1-201ENST00000296215 KTN1Q86UP2 1357 aaKnown RBP14.36□□□□□ -0.11
SNIP1-201ENST00000296215 ZBTB9Q96C00 473 aa14.36□□□□□ -0.11
SNIP1-201ENST00000296215 MCM5P33992 734 aa14.36□□□□□ -0.11
SNIP1-201ENST00000296215 RSPH14Q9UHP6 348 aa14.35□□□□□ -0.11
SNIP1-201ENST00000296215 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
SNIP1-201ENST00000296215 MCCP23508 829 aa14.34□□□□□ -0.11
SNIP1-201ENST00000296215 LRCH2Q5VUJ6 765 aa14.34□□□□□ -0.11
SNIP1-201ENST00000296215 CCDC112Q8NEF3 446 aa14.34□□□□□ -0.11
SNIP1-201ENST00000296215 GNL2Q13823 731 aaKnown RBP14.34□□□□□ -0.11
SNIP1-201ENST00000296215 CAVIN1Q6NZI2 390 aaKnown RBP14.34□□□□□ -0.11
SNIP1-201ENST00000296215 C10orf67Q8IYJ2 551 aa14.34□□□□□ -0.11
SNIP1-201ENST00000296215 MAPK8IP3Q9UPT6 1336 aa14.34□□□□□ -0.11
SNIP1-201ENST00000296215 KRT222Q8N1A0 295 aa14.34□□□□□ -0.11
SNIP1-201ENST00000296215 CRBNQ96SW2 442 aa14.34□□□□□ -0.11
SNIP1-201ENST00000296215 NEFHP12036 1026 aa14.33□□□□□ -0.12
SNIP1-201ENST00000296215 RGS22Q8NE09 1264 aa14.33□□□□□ -0.12
SNIP1-201ENST00000296215 FEZ1Q99689 392 aa14.33□□□□□ -0.12
SNIP1-201ENST00000296215 TTLL5Q6EMB2 1281 aa14.33□□□□□ -0.12
SNIP1-201ENST00000296215 STK11IPQ8N1F8 1099 aa14.33□□□□□ -0.12
SNIP1-201ENST00000296215 GOLGA6L4A6NEF3 574 aa14.32□□□□□ -0.12
SNIP1-201ENST00000296215 MNAT1P51948 309 aa14.32□□□□□ -0.12
SNIP1-201ENST00000296215 FBLN2P98095 1184 aa14.32□□□□□ -0.12
SNIP1-201ENST00000296215 TICAM2Q86XR7 235 aa14.32□□□□□ -0.12
SNIP1-201ENST00000296215 NOL10Q9BSC4 688 aaKnown RBP14.32□□□□□ -0.12
SNIP1-201ENST00000296215 PLIN1O60240 522 aa14.32□□□□□ -0.12
SNIP1-201ENST00000296215 GABPB1Q06547 395 aaPredicted RBP14.32□□□□□ -0.12
SNIP1-201ENST00000296215 MPNDQ8N594 471 aa14.32□□□□□ -0.12
SNIP1-201ENST00000296215 DRC1Q96MC2 740 aa14.32□□□□□ -0.12
SNIP1-201ENST00000296215 TAOK2Q9UL54 1235 aa14.32□□□□□ -0.12
SNIP1-201ENST00000296215 NPHP1O15259 732 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms