RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 KIAA1211Q6ZU35 1233 aa21.73■■□□□ 1.07
CDCP1-201ENST00000296129 LTV1Q96GA3 475 aaPredicted RBP21.72■■□□□ 1.07
CDCP1-201ENST00000296129 PRKRIP1Q9H875 184 aaPredicted RBP21.72■■□□□ 1.07
CDCP1-201ENST00000296129 LRRC9Q6ZRR7 1453 aa21.72■■□□□ 1.07
CDCP1-201ENST00000296129 VGFO15240 615 aaPredicted RBP21.71■■□□□ 1.07
CDCP1-201ENST00000296129 LMOD3Q0VAK6 560 aa21.71■■□□□ 1.07
CDCP1-201ENST00000296129 CYB5RLQ6IPT4 315 aa21.7■■□□□ 1.06
CDCP1-201ENST00000296129 SLC4A10Q6U841 1118 aa21.7■■□□□ 1.06
CDCP1-201ENST00000296129 MFAP1P55081 439 aaKnown RBP21.69■■□□□ 1.06
CDCP1-201ENST00000296129 EVC2Q86UK5 1308 aa21.69■■□□□ 1.06
CDCP1-201ENST00000296129 GOLGA6L6A8MZA4 724 aa21.69■■□□□ 1.06
CDCP1-201ENST00000296129 NAP1L5Q96NT1 182 aaPredicted RBP21.68■■□□□ 1.06
CDCP1-201ENST00000296129 OSCARQ8IYS5 282 aa21.67■■□□□ 1.06
CDCP1-201ENST00000296129 CGNL1Q0VF96 1302 aa21.67■■□□□ 1.06
CDCP1-201ENST00000296129 CHMP4AQ9BY43 222 aa21.66■■□□□ 1.06
CDCP1-201ENST00000296129 SLKQ9H2G2 1235 aaPredicted RBP21.66■■□□□ 1.06
CDCP1-201ENST00000296129 MINK1Q8N4C8 1332 aaPredicted RBP21.65■■□□□ 1.06
CDCP1-201ENST00000296129 SYNJ1O43426 1573 aa21.65■■□□□ 1.06
CDCP1-201ENST00000296129 CASKIN1Q8WXD9 1431 aa21.65■■□□□ 1.06
CDCP1-201ENST00000296129 TSHZ2Q9NRE2 1034 aa21.65■■□□□ 1.06
CDCP1-201ENST00000296129 NCOA2Q15596 1464 aa21.64■■□□□ 1.06
CDCP1-201ENST00000296129 HMMRO75330 724 aa21.64■■□□□ 1.05
CDCP1-201ENST00000296129 CHMP3Q9Y3E7 222 aa21.64■■□□□ 1.05
CDCP1-201ENST00000296129 L1TD1Q5T7N2 865 aaKnown RBP21.63■■□□□ 1.05
CDCP1-201ENST00000296129 COG3Q96JB2 828 aa21.63■■□□□ 1.05
CDCP1-201ENST00000296129 FYCO1Q9BQS8 1478 aa21.63■■□□□ 1.05
CDCP1-201ENST00000296129 DEKP35659 375 aaKnown RBP21.62■■□□□ 1.05
CDCP1-201ENST00000296129 TRIM6-TRIM34B2RNG4 842 aa21.62■■□□□ 1.05
CDCP1-201ENST00000296129 CCDC9Q9Y3X0 531 aaKnown RBP21.61■■□□□ 1.05
CDCP1-201ENST00000296129 PLIN1O60240 522 aa21.6■■□□□ 1.05
CDCP1-201ENST00000296129 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
CDCP1-201ENST00000296129 GBP4Q96PP9 640 aa21.6■■□□□ 1.05
CDCP1-201ENST00000296129 BCL2L13Q9BXK5 485 aa21.6■■□□□ 1.05
CDCP1-201ENST00000296129 GNL2Q13823 731 aaKnown RBP21.59■■□□□ 1.05
CDCP1-201ENST00000296129 GPATCH3Q96I76 525 aa21.59■■□□□ 1.05
CDCP1-201ENST00000296129 ZBED9Q6R2W3 1325 aa21.59■■□□□ 1.05
CDCP1-201ENST00000296129 GRIN2BQ13224 1484 aa21.58■■□□□ 1.05
CDCP1-201ENST00000296129 E9PSI1 815 aa21.57■■□□□ 1.04
CDCP1-201ENST00000296129 ISY1Q9ULR0 285 aaKnown RBP21.57■■□□□ 1.04
CDCP1-201ENST00000296129 ELL2O00472 640 aaPredicted RBP21.57■■□□□ 1.04
CDCP1-201ENST00000296129 GORABQ5T7V8 394 aa21.57■■□□□ 1.04
CDCP1-201ENST00000296129 ARAP1Q96P48 1450 aa21.56■■□□□ 1.04
CDCP1-201ENST00000296129 CFTRP13569 1480 aa21.56■■□□□ 1.04
CDCP1-201ENST00000296129 ANKRD50Q9ULJ7 1429 aa21.56■■□□□ 1.04
CDCP1-201ENST00000296129 RRP1P56182 461 aaKnown RBP21.56■■□□□ 1.04
CDCP1-201ENST00000296129 NRDCO43847 1150 aa21.55■■□□□ 1.04
CDCP1-201ENST00000296129 TAF7LQ5H9L4 462 aa21.55■■□□□ 1.04
CDCP1-201ENST00000296129 IPO9Q96P70 1041 aaKnown RBP21.55■■□□□ 1.04
CDCP1-201ENST00000296129 HDAC5Q9UQL6 1122 aa21.55■■□□□ 1.04
CDCP1-201ENST00000296129 GZF1Q9H116 711 aaPredicted RBP21.54■■□□□ 1.04
CDCP1-201ENST00000296129 DRC7Q8IY82 874 aa21.53■■□□□ 1.04
CDCP1-201ENST00000296129 EXOC6Q8TAG9 804 aa21.53■■□□□ 1.04
CDCP1-201ENST00000296129 ARHGAP5Q13017 1502 aa21.53■■□□□ 1.04
CDCP1-201ENST00000296129 NESP48681 1621 aa21.53■■□□□ 1.04
CDCP1-201ENST00000296129 APAF1O14727 1248 aa21.53■■□□□ 1.04
CDCP1-201ENST00000296129 CCDC7Q96M83 1385 aa21.53■■□□□ 1.04
CDCP1-201ENST00000296129 KIF7Q2M1P5 1343 aa21.52■■□□□ 1.04
CDCP1-201ENST00000296129 CRBNQ96SW2 442 aa21.52■■□□□ 1.04
CDCP1-201ENST00000296129 PTMSP20962 102 aa21.52■■□□□ 1.04
CDCP1-201ENST00000296129 MSNP26038 577 aaKnown RBP21.52■■□□□ 1.04
CDCP1-201ENST00000296129 CENPQQ7L2Z9 268 aaPredicted RBP21.51■■□□□ 1.03
CDCP1-201ENST00000296129 FAM69CQ0P6D2 419 aa21.5■■□□□ 1.03
CDCP1-201ENST00000296129 ZKSCAN2Q63HK3 967 aa21.5■■□□□ 1.03
CDCP1-201ENST00000296129 FOXD4L1Q9NU39 408 aa21.5■■□□□ 1.03
CDCP1-201ENST00000296129 NOL8Q76FK4 1167 aaKnown RBP21.49■■□□□ 1.03
CDCP1-201ENST00000296129 DIAPH1O60610 1272 aaKnown RBP21.48■■□□□ 1.03
CDCP1-201ENST00000296129 HSP90B1P14625 803 aaKnown RBP21.48■■□□□ 1.03
CDCP1-201ENST00000296129 C1orf141Q5JVX7 400 aa21.47■■□□□ 1.03
CDCP1-201ENST00000296129 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
CDCP1-201ENST00000296129 COG6Q9Y2V7 657 aa21.46■■□□□ 1.03
CDCP1-201ENST00000296129 CNTLNQ9NXG0 1405 aa21.46■■□□□ 1.03
CDCP1-201ENST00000296129 MRC2Q9UBG0 1479 aa21.46■■□□□ 1.03
CDCP1-201ENST00000296129 CHAF1AQ13111 956 aaPredicted RBP21.45■■□□□ 1.02
CDCP1-201ENST00000296129 SYNJ2O15056 1496 aa21.45■■□□□ 1.02
CDCP1-201ENST00000296129 ANKRD45Q5TZF3 282 aa21.45■■□□□ 1.02
CDCP1-201ENST00000296129 RRBP1Q9P2E9 1410 aaKnown RBP21.44■■□□□ 1.02
CDCP1-201ENST00000296129 PRG4Q92954 1404 aaPredicted RBP21.44■■□□□ 1.02
CDCP1-201ENST00000296129 EFCAB5A4FU69 1503 aa21.44■■□□□ 1.02
CDCP1-201ENST00000296129 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
CDCP1-201ENST00000296129 MIA2Q96PC5 1412 aa21.43■■□□□ 1.02
CDCP1-201ENST00000296129 RIPK4P57078 832 aa21.42■■□□□ 1.02
CDCP1-201ENST00000296129 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.42■■□□□ 1.02
CDCP1-201ENST00000296129 HTATSF1O43719 755 aaKnown RBP21.42■■□□□ 1.02
CDCP1-201ENST00000296129 EHBP1L1Q8N3D4 1523 aa21.41■■□□□ 1.02
CDCP1-201ENST00000296129 TOPBP1Q92547 1522 aa21.41■■□□□ 1.02
CDCP1-201ENST00000296129 PDE4AP27815 886 aa21.41■■□□□ 1.02
CDCP1-201ENST00000296129 FAM161AQ3B820 660 aa21.41■■□□□ 1.02
CDCP1-201ENST00000296129 AFAP1Q8N556 730 aa21.4■■□□□ 1.02
CDCP1-201ENST00000296129 TEFQ10587 303 aa21.4■■□□□ 1.02
CDCP1-201ENST00000296129 SYAP1Q96A49 352 aaPredicted RBP21.4■■□□□ 1.02
CDCP1-201ENST00000296129 RUNDC1Q96C34 613 aa21.39■■□□□ 1.01
CDCP1-201ENST00000296129 STAC3Q96MF2 364 aa21.39■■□□□ 1.01
CDCP1-201ENST00000296129 IFT140Q96RY7 1462 aa21.39■■□□□ 1.01
CDCP1-201ENST00000296129 RILPL2Q969X0 211 aa21.39■■□□□ 1.01
CDCP1-201ENST00000296129 TMX4Q9H1E5 349 aaPredicted RBP21.39■■□□□ 1.01
CDCP1-201ENST00000296129 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
CDCP1-201ENST00000296129 ST18O60284 1047 aa21.38■■□□□ 1.01
CDCP1-201ENST00000296129 TMEM132EQ6IEE7 984 aa21.38■■□□□ 1.01
CDCP1-201ENST00000296129 CABP2Q9NPB3 220 aa21.38■■□□□ 1.01
CDCP1-201ENST00000296129 PRXQ9BXM0 1461 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms