RNA–Protein interactions for RNA: ENST00000291722.11

CACFD1-201, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2 BASIC

Gene CACFD1, Length 2,688 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-201ENST00000291722 PLEKHH2Q8IVE3 1493 aa22.43■■□□□ 1.18
CACFD1-201ENST00000291722 RALGAPBQ86X10 1494 aa22.42■■□□□ 1.18
CACFD1-201ENST00000291722 MAST1Q9Y2H9 1570 aa22.41■■□□□ 1.18
CACFD1-201ENST00000291722 RGL3Q3MIN7 710 aa22.4■■□□□ 1.18
CACFD1-201ENST00000291722 DHX29Q7Z478 1369 aaKnown RBP22.39■■□□□ 1.18
CACFD1-201ENST00000291722 NEFLP07196 543 aa22.38■■□□□ 1.17
CACFD1-201ENST00000291722 PLA2R1Q13018 1463 aa22.38■■□□□ 1.17
CACFD1-201ENST00000291722 UNC13BO14795 1591 aa22.37■■□□□ 1.17
CACFD1-201ENST00000291722 ST20-MTHFSA0A0A6YYL1 179 aa22.37■■□□□ 1.17
CACFD1-201ENST00000291722 PLCH2O75038 1416 aa22.37■■□□□ 1.17
CACFD1-201ENST00000291722 TRAPPC8Q9Y2L5 1435 aa22.35■■□□□ 1.17
CACFD1-201ENST00000291722 IRX6P78412 446 aaPredicted RBP22.35■■□□□ 1.17
CACFD1-201ENST00000291722 CCDC144AA2RUR9 1427 aa22.34■■□□□ 1.17
CACFD1-201ENST00000291722 PLXNC1O60486 1568 aa22.34■■□□□ 1.17
CACFD1-201ENST00000291722 EFCAB2Q5VUJ9 269 aa22.33■■□□□ 1.16
CACFD1-201ENST00000291722 UHRF1BP1LA0JNW5 1464 aa22.32■■□□□ 1.16
CACFD1-201ENST00000291722 NBPF1Q3BBV0 1214 aa22.31■■□□□ 1.16
CACFD1-201ENST00000291722 ROCK2O75116 1388 aaKnown RBP22.31■■□□□ 1.16
CACFD1-201ENST00000291722 IQGAP3Q86VI3 1631 aa22.3■■□□□ 1.16
CACFD1-201ENST00000291722 ABCC1P33527 1531 aa22.3■■□□□ 1.16
CACFD1-201ENST00000291722 AFAP1Q8N556 730 aa22.29■■□□□ 1.16
CACFD1-201ENST00000291722 DUOX2Q9NRD8 1548 aa22.29■■□□□ 1.16
CACFD1-201ENST00000291722 SENP3-EIF4A1A0A087X0R7 540 aa22.29■■□□□ 1.16
CACFD1-201ENST00000291722 PRAG1Q86YV5 1406 aa22.28■■□□□ 1.16
CACFD1-201ENST00000291722 A2MP01023 1474 aa22.27■■□□□ 1.16
CACFD1-201ENST00000291722 TRPM1Q7Z4N2 1603 aa22.26■■□□□ 1.15
CACFD1-201ENST00000291722 ERBINQ96RT1 1412 aa22.23■■□□□ 1.15
CACFD1-201ENST00000291722 ARID4BQ4LE39 1312 aaPredicted RBP22.23■■□□□ 1.15
CACFD1-201ENST00000291722 MAGI2Q86UL8 1455 aa22.22■■□□□ 1.15
CACFD1-201ENST00000291722 SPAG9O60271 1321 aaKnown RBP22.21■■□□□ 1.15
CACFD1-201ENST00000291722 ZBED9Q6R2W3 1325 aa22.2■■□□□ 1.14
CACFD1-201ENST00000291722 WDR7Q9Y4E6 1490 aa22.17■■□□□ 1.14
CACFD1-201ENST00000291722 ZFYVE16Q7Z3T8 1539 aa22.16■■□□□ 1.14
CACFD1-201ENST00000291722 E9PCH4 1651 aa22.14■■□□□ 1.14
CACFD1-201ENST00000291722 ATP10AO60312 1499 aa22.12■■□□□ 1.13
CACFD1-201ENST00000291722 FANCAO15360 1455 aa22.12■■□□□ 1.13
CACFD1-201ENST00000291722 GPRASP1Q5JY77 1395 aa22.12■■□□□ 1.13
CACFD1-201ENST00000291722 MYT1LQ9UL68 1186 aa22.12■■□□□ 1.13
CACFD1-201ENST00000291722 DISP3Q9P2K9 1392 aa22.11■■□□□ 1.13
CACFD1-201ENST00000291722 PNISRQ8TF01 805 aaKnown RBP22.11■■□□□ 1.13
CACFD1-201ENST00000291722 TMC1Q8TDI8 760 aa22.1■■□□□ 1.13
CACFD1-201ENST00000291722 TESK2Q96S53 571 aa22.1■■□□□ 1.13
CACFD1-201ENST00000291722 PRDM15P57071 1507 aaPredicted RBP22.09■■□□□ 1.13
CACFD1-201ENST00000291722 ABCA9Q8IUA7 1624 aa22.09■■□□□ 1.13
CACFD1-201ENST00000291722 RTEL1-TNFRSF6BF6WH68 1400 aa22.08■■□□□ 1.13
CACFD1-201ENST00000291722 ARAP3Q8WWN8 1544 aa22.08■■□□□ 1.13
CACFD1-201ENST00000291722 SCAPERQ9BY12 1400 aa22.08■■□□□ 1.12
CACFD1-201ENST00000291722 ASXL2Q76L83 1435 aa22.07■■□□□ 1.12
CACFD1-201ENST00000291722 ATP7AQ04656 1500 aa22.06■■□□□ 1.12
CACFD1-201ENST00000291722 KIF3BO15066 747 aa22.05■■□□□ 1.12
CACFD1-201ENST00000291722 ADGRL1O94910 1474 aa22.05■■□□□ 1.12
CACFD1-201ENST00000291722 INO80Q9ULG1 1556 aaPredicted RBP22.04■■□□□ 1.12
CACFD1-201ENST00000291722 COL17A1Q9UMD9 1497 aaPredicted RBP22.04■■□□□ 1.12
CACFD1-201ENST00000291722 LAMC1P11047 1609 aa22.03■■□□□ 1.12
CACFD1-201ENST00000291722 MYBBP1AQ9BQG0 1328 aaKnown RBP22.03■■□□□ 1.12
CACFD1-201ENST00000291722 CLTCL1P53675 1640 aa22.03■■□□□ 1.12
CACFD1-201ENST00000291722 EIF2AK4Q9P2K8 1649 aaKnown RBP22.03■■□□□ 1.12
CACFD1-201ENST00000291722 PER1O15534 1290 aaPredicted RBP22.03■■□□□ 1.12
CACFD1-201ENST00000291722 DEPDC5O75140 1603 aa22.02■■□□□ 1.12
CACFD1-201ENST00000291722 SPHKAPQ2M3C7 1700 aa22.02■■□□□ 1.12
CACFD1-201ENST00000291722 RBM19Q9Y4C8 960 aaKnown RBP22.01■■□□□ 1.11
CACFD1-201ENST00000291722 TRPM2O94759 1503 aa22.01■■□□□ 1.11
CACFD1-201ENST00000291722 RALBP1Q15311 655 aa22■■□□□ 1.11
CACFD1-201ENST00000291722 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
CACFD1-201ENST00000291722 MADDQ8WXG6 1647 aa22■■□□□ 1.11
CACFD1-201ENST00000291722 RNF17Q9BXT8 1623 aaKnown RBP22■■□□□ 1.11
CACFD1-201ENST00000291722 PANK3Q9H999 370 aa21.99■■□□□ 1.11
CACFD1-201ENST00000291722 CEP152O94986 1710 aa21.99■■□□□ 1.11
CACFD1-201ENST00000291722 PTPRTO14522 1441 aa21.98■■□□□ 1.11
CACFD1-201ENST00000291722 BRD4O60885 1362 aaPredicted RBP21.98■■□□□ 1.11
CACFD1-201ENST00000291722 UGGT1Q9NYU2 1555 aa21.98■■□□□ 1.11
CACFD1-201ENST00000291722 TET3O43151 1660 aa21.97■■□□□ 1.11
CACFD1-201ENST00000291722 SMG6Q86US8 1419 aaKnown RBP21.97■■□□□ 1.11
CACFD1-201ENST00000291722 LRPPRCP42704 1394 aaKnown RBP21.97■■□□□ 1.11
CACFD1-201ENST00000291722 KTN1Q86UP2 1357 aaKnown RBP21.97■■□□□ 1.11
CACFD1-201ENST00000291722 PARD3Q8TEW0 1356 aa21.97■■□□□ 1.11
CACFD1-201ENST00000291722 ANO8Q9HCE9 1232 aaPredicted RBP21.96■■□□□ 1.11
CACFD1-201ENST00000291722 MROH1Q8NDA8 1641 aa21.96■■□□□ 1.11
CACFD1-201ENST00000291722 B4GALNT3Q6L9W6 998 aa21.95■■□□□ 1.1
CACFD1-201ENST00000291722 NUDCQ9Y266 331 aa21.95■■□□□ 1.1
CACFD1-201ENST00000291722 SALL2Q9Y467 1007 aaPredicted RBP21.95■■□□□ 1.1
CACFD1-201ENST00000291722 TMF1P82094 1093 aa21.95■■□□□ 1.1
CACFD1-201ENST00000291722 VWDEQ8N2E2 1590 aa21.95■■□□□ 1.1
CACFD1-201ENST00000291722 PPP4R2Q9NY27 417 aa21.94■■□□□ 1.1
CACFD1-201ENST00000291722 KIDINS220Q9ULH0 1771 aa21.94■■□□□ 1.1
CACFD1-201ENST00000291722 KANK1Q14678 1352 aa21.94■■□□□ 1.1
CACFD1-201ENST00000291722 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
CACFD1-201ENST00000291722 MSH5O43196 834 aa21.92■■□□□ 1.1
CACFD1-201ENST00000291722 NLRP13Q86W25 1043 aa21.91■■□□□ 1.1
CACFD1-201ENST00000291722 IQGAP1P46940 1657 aa21.91■■□□□ 1.1
CACFD1-201ENST00000291722 NPM1P06748 294 aaKnown RBP eCLIP21.88■■□□□ 1.09
CACFD1-201ENST00000291722 ERICH6BQ5W0A0 696 aa21.88■■□□□ 1.09
CACFD1-201ENST00000291722 CFAP65Q6ZU64 1925 aaKnown RBP21.87■■□□□ 1.09
CACFD1-201ENST00000291722 ADGRF5Q8IZF2 1346 aa21.85■■□□□ 1.09
CACFD1-201ENST00000291722 CFAP70Q5T0N1 1121 aa21.85■■□□□ 1.09
CACFD1-201ENST00000291722 PPRC1Q5VV67 1664 aaKnown RBP21.85■■□□□ 1.09
CACFD1-201ENST00000291722 CD109Q6YHK3 1445 aa21.84■■□□□ 1.09
CACFD1-201ENST00000291722 SCAF11Q99590 1463 aaKnown RBP21.84■■□□□ 1.09
CACFD1-201ENST00000291722 MROH2AA6NES4 1674 aa21.83■■□□□ 1.08
CACFD1-201ENST00000291722 ZNF518AQ6AHZ1 1483 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms