RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CRBNQ96SW2 442 aa20.85■□□□□ 0.93
SMAD6-201ENST00000288840 SPAG9O60271 1321 aaKnown RBP20.84■□□□□ 0.93
SMAD6-201ENST00000288840 GRIN2AQ12879 1464 aa20.84■□□□□ 0.93
SMAD6-201ENST00000288840 ARXQ96QS3 562 aa20.83■□□□□ 0.93
SMAD6-201ENST00000288840 NEFMP07197 916 aa20.83■□□□□ 0.92
SMAD6-201ENST00000288840 SLC4A3P48751 1232 aa20.83■□□□□ 0.92
SMAD6-201ENST00000288840 RTN4Q9NQC3 1192 aaKnown RBP20.82■□□□□ 0.92
SMAD6-201ENST00000288840 ADAMTS8Q9UP79 889 aa20.82■□□□□ 0.92
SMAD6-201ENST00000288840 KIF21AQ7Z4S6 1674 aa20.82■□□□□ 0.92
SMAD6-201ENST00000288840 CDCA8Q53HL2 280 aa20.81■□□□□ 0.92
SMAD6-201ENST00000288840 GPATCH8Q9UKJ3 1502 aaKnown RBP20.8■□□□□ 0.92
SMAD6-201ENST00000288840 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
SMAD6-201ENST00000288840 IPO9Q96P70 1041 aaKnown RBP20.8■□□□□ 0.92
SMAD6-201ENST00000288840 RRP7AQ9Y3A4 280 aaKnown RBP20.8■□□□□ 0.92
SMAD6-201ENST00000288840 RSPH4AQ5TD94 716 aa20.8■□□□□ 0.92
SMAD6-201ENST00000288840 STAG3Q9UJ98 1225 aa20.79■□□□□ 0.92
SMAD6-201ENST00000288840 TRAK1Q9UPV9 953 aa20.79■□□□□ 0.92
SMAD6-201ENST00000288840 PPM1GO15355 546 aaPredicted RBP20.78■□□□□ 0.92
SMAD6-201ENST00000288840 STK26Q9P289 416 aa20.77■□□□□ 0.92
SMAD6-201ENST00000288840 PDE4AP27815 886 aa20.77■□□□□ 0.91
SMAD6-201ENST00000288840 SAMD9Q5K651 1589 aa20.76■□□□□ 0.91
SMAD6-201ENST00000288840 ABCA5Q8WWZ7 1642 aa20.76■□□□□ 0.91
SMAD6-201ENST00000288840 TCOF1Q13428 1488 aaKnown RBP20.76■□□□□ 0.91
SMAD6-201ENST00000288840 APAF1O14727 1248 aa20.76■□□□□ 0.91
SMAD6-201ENST00000288840 WDR62O43379 1518 aa20.74■□□□□ 0.91
SMAD6-201ENST00000288840 GOLGA2Q08379 1002 aa20.73■□□□□ 0.91
SMAD6-201ENST00000288840 BCL2L13Q9BXK5 485 aa20.73■□□□□ 0.91
SMAD6-201ENST00000288840 MORC1Q86VD1 984 aa20.72■□□□□ 0.91
SMAD6-201ENST00000288840 CLUAP1Q96AJ1 413 aa20.72■□□□□ 0.91
SMAD6-201ENST00000288840 U2SURPO15042 1029 aaKnown RBP20.71■□□□□ 0.91
SMAD6-201ENST00000288840 CFAP70Q5T0N1 1121 aa20.71■□□□□ 0.91
SMAD6-201ENST00000288840 MAGI1Q96QZ7 1491 aaPredicted RBP20.71■□□□□ 0.91
SMAD6-201ENST00000288840 TCERG1O14776 1098 aaKnown RBP20.71■□□□□ 0.91
SMAD6-201ENST00000288840 DISP1Q96F81 1524 aa20.71■□□□□ 0.91
SMAD6-201ENST00000288840 BRD4O60885 1362 aaPredicted RBP20.71■□□□□ 0.91
SMAD6-201ENST00000288840 SMG6Q86US8 1419 aaKnown RBP20.7■□□□□ 0.9
SMAD6-201ENST00000288840 ARID4BQ4LE39 1312 aaPredicted RBP20.7■□□□□ 0.9
SMAD6-201ENST00000288840 PDE3BQ13370 1112 aa20.69■□□□□ 0.9
SMAD6-201ENST00000288840 ARHGAP5Q13017 1502 aa20.69■□□□□ 0.9
SMAD6-201ENST00000288840 DENND4BO75064 1496 aaPredicted RBP20.69■□□□□ 0.9
SMAD6-201ENST00000288840 SYNJ2O15056 1496 aa20.68■□□□□ 0.9
SMAD6-201ENST00000288840 PZPP20742 1482 aa20.68■□□□□ 0.9
SMAD6-201ENST00000288840 SLC24A1O60721 1099 aa20.67■□□□□ 0.9
SMAD6-201ENST00000288840 C20orf194Q5TEA3 1177 aa20.67■□□□□ 0.9
SMAD6-201ENST00000288840 ADAMTS12P58397 1594 aa20.67■□□□□ 0.9
SMAD6-201ENST00000288840 DHX29Q7Z478 1369 aaKnown RBP20.67■□□□□ 0.9
SMAD6-201ENST00000288840 TMEM132EQ6IEE7 984 aa20.66■□□□□ 0.9
SMAD6-201ENST00000288840 KANK1Q14678 1352 aa20.66■□□□□ 0.9
SMAD6-201ENST00000288840 TEX14Q8IWB6 1497 aa20.65■□□□□ 0.9
SMAD6-201ENST00000288840 ATP10BO94823 1461 aa20.65■□□□□ 0.9
SMAD6-201ENST00000288840 RAPGEF6Q8TEU7 1601 aa20.65■□□□□ 0.9
SMAD6-201ENST00000288840 PPP2R1AP30153 589 aa20.63■□□□□ 0.89
SMAD6-201ENST00000288840 SRPK2P78362 688 aaKnown RBP20.62■□□□□ 0.89
SMAD6-201ENST00000288840 KIAA0556O60303 1618 aa20.62■□□□□ 0.89
SMAD6-201ENST00000288840 U2AF1L5P0DN76 240 aaPredicted RBP20.62■□□□□ 0.89
SMAD6-201ENST00000288840 U2AF1Q01081 240 aaKnown RBP eCLIP20.62■□□□□ 0.89
SMAD6-201ENST00000288840 SPRYD3Q8NCJ5 442 aa20.61■□□□□ 0.89
SMAD6-201ENST00000288840 TARBP1Q13395 1621 aaKnown RBP20.61■□□□□ 0.89
SMAD6-201ENST00000288840 DISP3Q9P2K9 1392 aa20.61■□□□□ 0.89
SMAD6-201ENST00000288840 COG6Q9Y2V7 657 aa20.6■□□□□ 0.89
SMAD6-201ENST00000288840 PLEKHH2Q8IVE3 1493 aa20.59■□□□□ 0.89
SMAD6-201ENST00000288840 CFAP53Q96M91 514 aa20.59■□□□□ 0.89
SMAD6-201ENST00000288840 DDRGK1Q96HY6 314 aa20.58■□□□□ 0.89
SMAD6-201ENST00000288840 MLECQ14165 292 aa20.58■□□□□ 0.89
SMAD6-201ENST00000288840 SPATA31E1Q6ZUB1 1445 aa20.58■□□□□ 0.88
SMAD6-201ENST00000288840 BCAR3O75815 825 aa20.57■□□□□ 0.88
SMAD6-201ENST00000288840 POGKQ9P215 609 aa20.57■□□□□ 0.88
SMAD6-201ENST00000288840 FTSJ3Q8IY81 847 aaKnown RBP20.57■□□□□ 0.88
SMAD6-201ENST00000288840 UPF2Q9HAU5 1272 aaKnown RBP20.57■□□□□ 0.88
SMAD6-201ENST00000288840 KIF14Q15058 1648 aa20.56■□□□□ 0.88
SMAD6-201ENST00000288840 PBRM1Q86U86 1689 aa20.55■□□□□ 0.88
SMAD6-201ENST00000288840 LRRIQ1Q96JM4 1722 aa20.55■□□□□ 0.88
SMAD6-201ENST00000288840 ERBINQ96RT1 1412 aa20.54■□□□□ 0.88
SMAD6-201ENST00000288840 WASHC2CQ9Y4E1 1318 aa20.54■□□□□ 0.88
SMAD6-201ENST00000288840 KDM5BQ9UGL1 1544 aa20.53■□□□□ 0.88
SMAD6-201ENST00000288840 SLC12A5Q9H2X9 1139 aa20.53■□□□□ 0.88
SMAD6-201ENST00000288840 PANK1Q8TE04 598 aa20.53■□□□□ 0.88
SMAD6-201ENST00000288840 SLKQ9H2G2 1235 aaPredicted RBP20.53■□□□□ 0.88
SMAD6-201ENST00000288840 CCDC141Q6ZP82 1450 aa20.53■□□□□ 0.88
SMAD6-201ENST00000288840 DNMT1P26358 1616 aaKnown RBP20.53■□□□□ 0.88
SMAD6-201ENST00000288840 PLEKHG5O94827 1062 aa20.5■□□□□ 0.87
SMAD6-201ENST00000288840 TESK2Q96S53 571 aa20.5■□□□□ 0.87
SMAD6-201ENST00000288840 SCAPERQ9BY12 1400 aa20.5■□□□□ 0.87
SMAD6-201ENST00000288840 CENPJQ9HC77 1338 aaPredicted RBP20.49■□□□□ 0.87
SMAD6-201ENST00000288840 PER1O15534 1290 aaPredicted RBP20.49■□□□□ 0.87
SMAD6-201ENST00000288840 SOX12O15370 315 aa20.49■□□□□ 0.87
SMAD6-201ENST00000288840 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
SMAD6-201ENST00000288840 MAPK8IP3Q9UPT6 1336 aa20.48■□□□□ 0.87
SMAD6-201ENST00000288840 GCC2Q8IWJ2 1684 aa20.47■□□□□ 0.87
SMAD6-201ENST00000288840 BACH2Q9BYV9 841 aa20.47■□□□□ 0.87
SMAD6-201ENST00000288840 EIF5BO60841 1220 aaKnown RBP20.46■□□□□ 0.87
SMAD6-201ENST00000288840 EIF3AQ14152 1382 aaKnown RBP20.46■□□□□ 0.87
SMAD6-201ENST00000288840 ESF1Q9H501 851 aaKnown RBP20.45■□□□□ 0.86
SMAD6-201ENST00000288840 CENPQQ7L2Z9 268 aaPredicted RBP20.45■□□□□ 0.86
SMAD6-201ENST00000288840 RALGAPBQ86X10 1494 aa20.45■□□□□ 0.86
SMAD6-201ENST00000288840 CABP2Q9NPB3 220 aa20.44■□□□□ 0.86
SMAD6-201ENST00000288840 ADGRF5Q8IZF2 1346 aa20.43■□□□□ 0.86
SMAD6-201ENST00000288840 HSP90AA1P07900 732 aaKnown RBP20.43■□□□□ 0.86
SMAD6-201ENST00000288840 MTHFSP49914 203 aa20.43■□□□□ 0.86
SMAD6-201ENST00000288840 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms