RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 KDM5DQ9BY66 1539 aa24.99■■□□□ 1.59
CAPN1-201ENST00000279247 KIF3BO15066 747 aa24.98■■□□□ 1.59
CAPN1-201ENST00000279247 MAST1Q9Y2H9 1570 aa24.98■■□□□ 1.59
CAPN1-201ENST00000279247 USP47Q96K76 1375 aa24.97■■□□□ 1.59
CAPN1-201ENST00000279247 DUOX2Q9NRD8 1548 aa24.97■■□□□ 1.59
CAPN1-201ENST00000279247 CCDC7Q96M83 1385 aa24.97■■□□□ 1.59
CAPN1-201ENST00000279247 KIF7Q2M1P5 1343 aa24.96■■□□□ 1.59
CAPN1-201ENST00000279247 PLXNC1O60486 1568 aa24.94■■□□□ 1.58
CAPN1-201ENST00000279247 PLA2R1Q13018 1463 aa24.9■■□□□ 1.58
CAPN1-201ENST00000279247 ERBINQ96RT1 1412 aa24.9■■□□□ 1.58
CAPN1-201ENST00000279247 SPATA31E1Q6ZUB1 1445 aa24.89■■□□□ 1.58
CAPN1-201ENST00000279247 ST20-MTHFSA0A0A6YYL1 179 aa24.88■■□□□ 1.57
CAPN1-201ENST00000279247 CCER2I3L3R5 266 aa24.88■■□□□ 1.57
CAPN1-201ENST00000279247 TSPOAP1O95153 1857 aa24.88■■□□□ 1.57
CAPN1-201ENST00000279247 UNC13BO14795 1591 aa24.88■■□□□ 1.57
CAPN1-201ENST00000279247 NBPF1Q3BBV0 1214 aa24.88■■□□□ 1.57
CAPN1-201ENST00000279247 ARAP3Q8WWN8 1544 aa24.88■■□□□ 1.57
CAPN1-201ENST00000279247 ROCK2O75116 1388 aaKnown RBP24.87■■□□□ 1.57
CAPN1-201ENST00000279247 ZFYVE16Q7Z3T8 1539 aa24.87■■□□□ 1.57
CAPN1-201ENST00000279247 CNTLNQ9NXG0 1405 aa24.86■■□□□ 1.57
CAPN1-201ENST00000279247 CCDC184Q52MB2 194 aa24.85■■□□□ 1.57
CAPN1-201ENST00000279247 ATP7AQ04656 1500 aa24.83■■□□□ 1.57
CAPN1-201ENST00000279247 IQGAP3Q86VI3 1631 aa24.82■■□□□ 1.56
CAPN1-201ENST00000279247 GGT6Q6P531 493 aa24.82■■□□□ 1.56
CAPN1-201ENST00000279247 RTEL1-TNFRSF6BF6WH68 1400 aa24.8■■□□□ 1.56
CAPN1-201ENST00000279247 RALGAPBQ86X10 1494 aa24.78■■□□□ 1.56
CAPN1-201ENST00000279247 UHRF1BP1Q6BDS2 1440 aa24.78■■□□□ 1.56
CAPN1-201ENST00000279247 ZNF518AQ6AHZ1 1483 aa24.78■■□□□ 1.56
CAPN1-201ENST00000279247 POGZQ7Z3K3 1410 aa24.78■■□□□ 1.56
CAPN1-201ENST00000279247 PRKRIP1Q9H875 184 aaPredicted RBP24.78■■□□□ 1.56
CAPN1-201ENST00000279247 FAM9BQ8IZU0 186 aa24.77■■□□□ 1.56
CAPN1-201ENST00000279247 BCORL1Q5H9F3 1711 aa24.77■■□□□ 1.56
CAPN1-201ENST00000279247 DIP2BQ9P265 1576 aa24.76■■□□□ 1.55
CAPN1-201ENST00000279247 A2MP01023 1474 aa24.76■■□□□ 1.55
CAPN1-201ENST00000279247 KANK1Q14678 1352 aa24.76■■□□□ 1.55
CAPN1-201ENST00000279247 HNRNPUQ00839 825 aaKnown RBP eCLIP24.76■■□□□ 1.55
CAPN1-201ENST00000279247 MRS2Q9HD23 443 aa24.74■■□□□ 1.55
CAPN1-201ENST00000279247 KDM5CP41229 1560 aa24.74■■□□□ 1.55
CAPN1-201ENST00000279247 MAGI2Q86UL8 1455 aa24.73■■□□□ 1.55
CAPN1-201ENST00000279247 DHX29Q7Z478 1369 aaKnown RBP24.73■■□□□ 1.55
CAPN1-201ENST00000279247 PRAG1Q86YV5 1406 aa24.73■■□□□ 1.55
CAPN1-201ENST00000279247 KIDINS220Q9ULH0 1771 aa24.73■■□□□ 1.55
CAPN1-201ENST00000279247 CHGAP10645 457 aaKnown RBP24.72■■□□□ 1.55
CAPN1-201ENST00000279247 TRHP20396 242 aaPredicted RBP24.72■■□□□ 1.55
CAPN1-201ENST00000279247 MAP3K4Q9Y6R4 1608 aa24.72■■□□□ 1.55
CAPN1-201ENST00000279247 INO80Q9ULG1 1556 aaPredicted RBP24.72■■□□□ 1.55
CAPN1-201ENST00000279247 YEATS2Q9ULM3 1422 aa24.71■■□□□ 1.55
CAPN1-201ENST00000279247 SENP3-EIF4A1A0A087X0R7 540 aa24.7■■□□□ 1.55
CAPN1-201ENST00000279247 E9PCH4 1651 aa24.69■■□□□ 1.54
CAPN1-201ENST00000279247 NEO1Q92859 1461 aa24.69■■□□□ 1.54
CAPN1-201ENST00000279247 CFAP65Q6ZU64 1925 aaKnown RBP24.68■■□□□ 1.54
CAPN1-201ENST00000279247 ATP10AO60312 1499 aa24.67■■□□□ 1.54
CAPN1-201ENST00000279247 SENP3Q9H4L4 574 aaPredicted RBP24.65■■□□□ 1.54
CAPN1-201ENST00000279247 GLI2P10070 1586 aa24.63■■□□□ 1.53
CAPN1-201ENST00000279247 MLECQ14165 292 aa24.63■■□□□ 1.53
CAPN1-201ENST00000279247 BCANQ96GW7 911 aa24.63■■□□□ 1.53
CAPN1-201ENST00000279247 CFAP74Q9C0B2 1584 aa24.62■■□□□ 1.53
CAPN1-201ENST00000279247 UGGT1Q9NYU2 1555 aa24.62■■□□□ 1.53
CAPN1-201ENST00000279247 COL17A1Q9UMD9 1497 aaPredicted RBP24.62■■□□□ 1.53
CAPN1-201ENST00000279247 MLH3Q9UHC1 1453 aa24.6■■□□□ 1.53
CAPN1-201ENST00000279247 TRPM1Q7Z4N2 1603 aa24.59■■□□□ 1.53
CAPN1-201ENST00000279247 WASHC2CQ9Y4E1 1318 aa24.59■■□□□ 1.53
CAPN1-201ENST00000279247 HECW2Q9P2P5 1572 aa24.59■■□□□ 1.53
CAPN1-201ENST00000279247 SUPT16HQ9Y5B9 1047 aaKnown RBP24.59■■□□□ 1.53
CAPN1-201ENST00000279247 ABCA6Q8N139 1617 aa24.59■■□□□ 1.53
CAPN1-201ENST00000279247 PPRC1Q5VV67 1664 aaKnown RBP24.58■■□□□ 1.53
CAPN1-201ENST00000279247 POLR1AO95602 1720 aaPredicted RBP24.58■■□□□ 1.52
CAPN1-201ENST00000279247 FRMPD1Q5SYB0 1578 aa24.57■■□□□ 1.52
CAPN1-201ENST00000279247 KIF13AQ9H1H9 1805 aa24.57■■□□□ 1.52
CAPN1-201ENST00000279247 CLTCL1P53675 1640 aa24.56■■□□□ 1.52
CAPN1-201ENST00000279247 SPHKAPQ2M3C7 1700 aa24.55■■□□□ 1.52
CAPN1-201ENST00000279247 DEPDC5O75140 1603 aa24.55■■□□□ 1.52
CAPN1-201ENST00000279247 TET3O43151 1660 aa24.55■■□□□ 1.52
CAPN1-201ENST00000279247 RICTORQ6R327 1708 aa24.54■■□□□ 1.52
CAPN1-201ENST00000279247 TRPM2O94759 1503 aa24.54■■□□□ 1.52
CAPN1-201ENST00000279247 FKBP8Q14318 412 aa24.54■■□□□ 1.52
CAPN1-201ENST00000279247 NUTM2DQ5VT03 806 aaPredicted RBP24.54■■□□□ 1.52
CAPN1-201ENST00000279247 MROH1Q8NDA8 1641 aa24.53■■□□□ 1.52
CAPN1-201ENST00000279247 DISP3Q9P2K9 1392 aa24.52■■□□□ 1.52
CAPN1-201ENST00000279247 PTPRTO14522 1441 aa24.52■■□□□ 1.52
CAPN1-201ENST00000279247 CFAP70Q5T0N1 1121 aa24.52■■□□□ 1.52
CAPN1-201ENST00000279247 ARID4BQ4LE39 1312 aaPredicted RBP24.51■■□□□ 1.51
CAPN1-201ENST00000279247 TESK2Q96S53 571 aa24.51■■□□□ 1.51
CAPN1-201ENST00000279247 PRDM15P57071 1507 aaPredicted RBP24.51■■□□□ 1.51
CAPN1-201ENST00000279247 CEP152O94986 1710 aa24.5■■□□□ 1.51
CAPN1-201ENST00000279247 DIP2CQ9Y2E4 1556 aa24.5■■□□□ 1.51
CAPN1-201ENST00000279247 ADGRF5Q8IZF2 1346 aa24.5■■□□□ 1.51
CAPN1-201ENST00000279247 GPRASP1Q5JY77 1395 aa24.48■■□□□ 1.51
CAPN1-201ENST00000279247 TMF1P82094 1093 aa24.48■■□□□ 1.51
CAPN1-201ENST00000279247 CC2D1BQ5T0F9 858 aaKnown RBP24.48■■□□□ 1.51
CAPN1-201ENST00000279247 TMC1Q8TDI8 760 aa24.48■■□□□ 1.51
CAPN1-201ENST00000279247 DNAJC5Q9H3Z4 198 aa24.47■■□□□ 1.51
CAPN1-201ENST00000279247 VWDEQ8N2E2 1590 aa24.47■■□□□ 1.51
CAPN1-201ENST00000279247 EIF2AK4Q9P2K8 1649 aaKnown RBP24.46■■□□□ 1.51
CAPN1-201ENST00000279247 PANK3Q9H999 370 aa24.44■■□□□ 1.5
CAPN1-201ENST00000279247 EFCAB6Q5THR3 1501 aa24.44■■□□□ 1.5
CAPN1-201ENST00000279247 NEFLP07196 543 aa24.44■■□□□ 1.5
CAPN1-201ENST00000279247 NPATQ14207 1427 aa24.44■■□□□ 1.5
CAPN1-201ENST00000279247 IRX6P78412 446 aaPredicted RBP24.43■■□□□ 1.5
CAPN1-201ENST00000279247 PLPPR3Q6T4P5 718 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms