RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 CASKIN1Q8WXD9 1431 aa14.27□□□□□ -0.12
USP6NL-201ENST00000277575 CGNL1Q0VF96 1302 aa14.27□□□□□ -0.12
USP6NL-201ENST00000277575 MCCP23508 829 aa14.27□□□□□ -0.12
USP6NL-201ENST00000277575 CENPJQ9HC77 1338 aaPredicted RBP14.27□□□□□ -0.13
USP6NL-201ENST00000277575 RRP7AQ9Y3A4 280 aaKnown RBP14.27□□□□□ -0.13
USP6NL-201ENST00000277575 PTMAP06454 111 aaKnown RBP14.26□□□□□ -0.13
USP6NL-201ENST00000277575 AFAP1Q8N556 730 aa14.26□□□□□ -0.13
USP6NL-201ENST00000277575 ANKRD50Q9ULJ7 1429 aa14.26□□□□□ -0.13
USP6NL-201ENST00000277575 COG3Q96JB2 828 aa14.25□□□□□ -0.13
USP6NL-201ENST00000277575 CCDC9Q9Y3X0 531 aaKnown RBP14.24□□□□□ -0.13
USP6NL-201ENST00000277575 CUX1P39880 1505 aa14.24□□□□□ -0.13
USP6NL-201ENST00000277575 NCOA2Q15596 1464 aa14.24□□□□□ -0.13
USP6NL-201ENST00000277575 RBM19Q9Y4C8 960 aaKnown RBP14.24□□□□□ -0.13
USP6NL-201ENST00000277575 TCERG1O14776 1098 aaKnown RBP14.23□□□□□ -0.13
USP6NL-201ENST00000277575 SLC4A10Q6U841 1118 aa14.23□□□□□ -0.13
USP6NL-201ENST00000277575 PMFBP1Q8TBY8 1022 aa14.23□□□□□ -0.13
USP6NL-201ENST00000277575 ARAP1Q96P48 1450 aa14.23□□□□□ -0.13
USP6NL-201ENST00000277575 KIAA1211Q6ZU35 1233 aa14.23□□□□□ -0.13
USP6NL-201ENST00000277575 STAC3Q96MF2 364 aa14.23□□□□□ -0.13
USP6NL-201ENST00000277575 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
USP6NL-201ENST00000277575 HDAC5Q9UQL6 1122 aa14.22□□□□□ -0.13
USP6NL-201ENST00000277575 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.13
USP6NL-201ENST00000277575 HMMRO75330 724 aa14.21□□□□□ -0.13
USP6NL-201ENST00000277575 PRG4Q92954 1404 aaPredicted RBP14.21□□□□□ -0.13
USP6NL-201ENST00000277575 PLCB2Q00722 1185 aa14.21□□□□□ -0.14
USP6NL-201ENST00000277575 SPRYD3Q8NCJ5 442 aa14.21□□□□□ -0.14
USP6NL-201ENST00000277575 ERICH3Q5RHP9 1530 aa14.21□□□□□ -0.14
USP6NL-201ENST00000277575 ELL2O00472 640 aaPredicted RBP14.2□□□□□ -0.14
USP6NL-201ENST00000277575 GOLGA6L4A6NEF3 574 aa14.2□□□□□ -0.14
USP6NL-201ENST00000277575 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
USP6NL-201ENST00000277575 MRC2Q9UBG0 1479 aa14.19□□□□□ -0.14
USP6NL-201ENST00000277575 APAF1O14727 1248 aa14.19□□□□□ -0.14
USP6NL-201ENST00000277575 TOPBP1Q92547 1522 aa14.19□□□□□ -0.14
USP6NL-201ENST00000277575 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
USP6NL-201ENST00000277575 PRXQ9BXM0 1461 aa14.18□□□□□ -0.14
USP6NL-201ENST00000277575 BCL2L13Q9BXK5 485 aa14.18□□□□□ -0.14
USP6NL-201ENST00000277575 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
USP6NL-201ENST00000277575 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.17□□□□□ -0.14
USP6NL-201ENST00000277575 CHMP3Q9Y3E7 222 aa14.17□□□□□ -0.14
USP6NL-201ENST00000277575 CC2D2AQ9P2K1 1620 aa14.17□□□□□ -0.14
USP6NL-201ENST00000277575 IFT140Q96RY7 1462 aa14.17□□□□□ -0.14
USP6NL-201ENST00000277575 HMGXB3Q12766 1538 aa14.16□□□□□ -0.14
USP6NL-201ENST00000277575 E9PSI1 815 aa14.16□□□□□ -0.14
USP6NL-201ENST00000277575 GORABQ5T7V8 394 aa14.16□□□□□ -0.14
USP6NL-201ENST00000277575 KIF7Q2M1P5 1343 aa14.15□□□□□ -0.14
USP6NL-201ENST00000277575 TAF7LQ5H9L4 462 aa14.15□□□□□ -0.14
USP6NL-201ENST00000277575 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.15
USP6NL-201ENST00000277575 TULP1O00294 542 aaPredicted RBP14.14□□□□□ -0.15
USP6NL-201ENST00000277575 DIAPH1O60610 1272 aaKnown RBP14.14□□□□□ -0.15
USP6NL-201ENST00000277575 TMEM132EQ6IEE7 984 aa14.14□□□□□ -0.15
USP6NL-201ENST00000277575 DNTTIP2Q5QJE6 756 aaKnown RBP14.14□□□□□ -0.15
USP6NL-201ENST00000277575 TEFQ10587 303 aa14.14□□□□□ -0.15
USP6NL-201ENST00000277575 CCDC7Q96M83 1385 aa14.14□□□□□ -0.15
USP6NL-201ENST00000277575 ARHGAP5Q13017 1502 aa14.13□□□□□ -0.15
USP6NL-201ENST00000277575 TRIM6-TRIM34B2RNG4 842 aa14.13□□□□□ -0.15
USP6NL-201ENST00000277575 MFAP1P55081 439 aaKnown RBP14.13□□□□□ -0.15
USP6NL-201ENST00000277575 PLIN1O60240 522 aa14.13□□□□□ -0.15
USP6NL-201ENST00000277575 SLKQ9H2G2 1235 aaPredicted RBP14.12□□□□□ -0.15
USP6NL-201ENST00000277575 C1orf141Q5JVX7 400 aa14.12□□□□□ -0.15
USP6NL-201ENST00000277575 CFAP70Q5T0N1 1121 aa14.12□□□□□ -0.15
USP6NL-201ENST00000277575 GPATCH3Q96I76 525 aa14.11□□□□□ -0.15
USP6NL-201ENST00000277575 PSME1Q06323 249 aa14.11□□□□□ -0.15
USP6NL-201ENST00000277575 ZKSCAN2Q63HK3 967 aa14.11□□□□□ -0.15
USP6NL-201ENST00000277575 TOP2BQ02880 1626 aa14.11□□□□□ -0.15
USP6NL-201ENST00000277575 ISY1Q9ULR0 285 aaKnown RBP14.11□□□□□ -0.15
USP6NL-201ENST00000277575 NGEFQ8N5V2 710 aa14.11□□□□□ -0.15
USP6NL-201ENST00000277575 RRBP1Q9P2E9 1410 aaKnown RBP14.1□□□□□ -0.15
USP6NL-201ENST00000277575 GLIPR1L2Q4G1C9 344 aa14.09□□□□□ -0.15
USP6NL-201ENST00000277575 TROQ12816 1431 aaPredicted RBP14.09□□□□□ -0.15
USP6NL-201ENST00000277575 EFCAB5A4FU69 1503 aa14.09□□□□□ -0.15
USP6NL-201ENST00000277575 GGNBP2Q9H3C7 697 aa14.09□□□□□ -0.15
USP6NL-201ENST00000277575 MIA2Q96PC5 1412 aa14.09□□□□□ -0.15
USP6NL-201ENST00000277575 EVA1CP58658 441 aa14.09□□□□□ -0.15
USP6NL-201ENST00000277575 RRP1P56182 461 aaKnown RBP14.08□□□□□ -0.16
USP6NL-201ENST00000277575 RIPK4P57078 832 aa14.08□□□□□ -0.16
USP6NL-201ENST00000277575 PEG3Q9GZU2 1588 aa14.08□□□□□ -0.16
USP6NL-201ENST00000277575 COG6Q9Y2V7 657 aa14.08□□□□□ -0.16
USP6NL-201ENST00000277575 GTF2E1P29083 439 aaPredicted RBP14.08□□□□□ -0.16
USP6NL-201ENST00000277575 CABP2Q9NPB3 220 aa14.08□□□□□ -0.16
USP6NL-201ENST00000277575 SNAPC4Q5SXM2 1469 aa14.08□□□□□ -0.16
USP6NL-201ENST00000277575 EXOC6Q8TAG9 804 aa14.07□□□□□ -0.16
USP6NL-201ENST00000277575 GNL2Q13823 731 aaKnown RBP14.07□□□□□ -0.16
USP6NL-201ENST00000277575 GBP4Q96PP9 640 aa14.06□□□□□ -0.16
USP6NL-201ENST00000277575 SCAPERQ9BY12 1400 aa14.06□□□□□ -0.16
USP6NL-201ENST00000277575 NRDCO43847 1150 aa14.06□□□□□ -0.16
USP6NL-201ENST00000277575 WASHC2AQ641Q2 1341 aa14.06□□□□□ -0.16
USP6NL-201ENST00000277575 C9orf84Q5VXU9 1444 aa14.06□□□□□ -0.16
USP6NL-201ENST00000277575 CENPQQ7L2Z9 268 aaPredicted RBP14.05□□□□□ -0.16
USP6NL-201ENST00000277575 RUNDC1Q96C34 613 aa14.05□□□□□ -0.16
USP6NL-201ENST00000277575 TMX4Q9H1E5 349 aaPredicted RBP14.05□□□□□ -0.16
USP6NL-201ENST00000277575 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
USP6NL-201ENST00000277575 TSHZ2Q9NRE2 1034 aa14.05□□□□□ -0.16
USP6NL-201ENST00000277575 NBPF1Q3BBV0 1214 aa14.05□□□□□ -0.16
USP6NL-201ENST00000277575 CRBNQ96SW2 442 aa14.05□□□□□ -0.16
USP6NL-201ENST00000277575 GOLGA6L6A8MZA4 724 aa14.04□□□□□ -0.16
USP6NL-201ENST00000277575 EIF2S2P20042 333 aaKnown RBP14.04□□□□□ -0.16
USP6NL-201ENST00000277575 HFM1A2PYH4 1435 aa14.04□□□□□ -0.16
USP6NL-201ENST00000277575 ANKRD45Q5TZF3 282 aa14.04□□□□□ -0.16
USP6NL-201ENST00000277575 TTC5Q8N0Z6 440 aa14.03□□□□□ -0.16
USP6NL-201ENST00000277575 TXNDC2Q86VQ3 553 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms