RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 TROQ12816 1431 aaPredicted RBP18.65■□□□□ 0.58
TMEM47-201ENST00000275954 C11orf95C9JLR9 678 aaPredicted RBP18.64■□□□□ 0.58
TMEM47-201ENST00000275954 NBPF1Q3BBV0 1214 aa18.64■□□□□ 0.58
TMEM47-201ENST00000275954 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.58
TMEM47-201ENST00000275954 BIVM-ERCC5R4GMW8 1640 aa18.64■□□□□ 0.57
TMEM47-201ENST00000275954 FTSJ3Q8IY81 847 aaKnown RBP18.63■□□□□ 0.57
TMEM47-201ENST00000275954 NOP58Q9Y2X3 529 aaKnown RBP18.63■□□□□ 0.57
TMEM47-201ENST00000275954 ZBED9Q6R2W3 1325 aa18.62■□□□□ 0.57
TMEM47-201ENST00000275954 MINK1Q8N4C8 1332 aaPredicted RBP18.62■□□□□ 0.57
TMEM47-201ENST00000275954 MAPK8IP3Q9UPT6 1336 aa18.62■□□□□ 0.57
TMEM47-201ENST00000275954 CD109Q6YHK3 1445 aa18.62■□□□□ 0.57
TMEM47-201ENST00000275954 FBXO31Q5XUX0 539 aaPredicted RBP18.62■□□□□ 0.57
TMEM47-201ENST00000275954 EIF4G3O43432 1585 aaKnown RBP18.62■□□□□ 0.57
TMEM47-201ENST00000275954 MYBBP1AQ9BQG0 1328 aaKnown RBP18.62■□□□□ 0.57
TMEM47-201ENST00000275954 EID1Q9Y6B2 187 aa18.61■□□□□ 0.57
TMEM47-201ENST00000275954 SLC26A8Q96RN1 970 aa18.61■□□□□ 0.57
TMEM47-201ENST00000275954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.6■□□□□ 0.57
TMEM47-201ENST00000275954 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
TMEM47-201ENST00000275954 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
TMEM47-201ENST00000275954 ERICH6BQ5W0A0 696 aa18.59■□□□□ 0.57
TMEM47-201ENST00000275954 CNTLNQ9NXG0 1405 aa18.57■□□□□ 0.56
TMEM47-201ENST00000275954 RRP7AQ9Y3A4 280 aaKnown RBP18.57■□□□□ 0.56
TMEM47-201ENST00000275954 EXOC6Q8TAG9 804 aa18.57■□□□□ 0.56
TMEM47-201ENST00000275954 CFAP70Q5T0N1 1121 aa18.56■□□□□ 0.56
TMEM47-201ENST00000275954 PTPRKQ15262 1439 aa18.55■□□□□ 0.56
TMEM47-201ENST00000275954 HDGFP51858 240 aaKnown RBP18.54■□□□□ 0.56
TMEM47-201ENST00000275954 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
TMEM47-201ENST00000275954 CLUAP1Q96AJ1 413 aa18.54■□□□□ 0.56
TMEM47-201ENST00000275954 MIA2Q96PC5 1412 aa18.54■□□□□ 0.56
TMEM47-201ENST00000275954 GOLGA2Q08379 1002 aa18.54■□□□□ 0.56
TMEM47-201ENST00000275954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.53■□□□□ 0.56
TMEM47-201ENST00000275954 DAPK1P53355 1430 aa18.52■□□□□ 0.56
TMEM47-201ENST00000275954 WDR62O43379 1518 aa18.52■□□□□ 0.55
TMEM47-201ENST00000275954 LTV1Q96GA3 475 aaPredicted RBP18.51■□□□□ 0.55
TMEM47-201ENST00000275954 C9orf84Q5VXU9 1444 aa18.51■□□□□ 0.55
TMEM47-201ENST00000275954 ATP10BO94823 1461 aa18.51■□□□□ 0.55
TMEM47-201ENST00000275954 NUTM2GQ5VZR2 741 aa18.51■□□□□ 0.55
TMEM47-201ENST00000275954 THOC2Q8NI27 1593 aaKnown RBP18.5■□□□□ 0.55
TMEM47-201ENST00000275954 APAF1O14727 1248 aa18.5■□□□□ 0.55
TMEM47-201ENST00000275954 CDCA7LQ96GN5 454 aa18.49■□□□□ 0.55
TMEM47-201ENST00000275954 DDRGK1Q96HY6 314 aa18.49■□□□□ 0.55
TMEM47-201ENST00000275954 CUL7Q14999 1698 aa18.49■□□□□ 0.55
TMEM47-201ENST00000275954 TXNDC2Q86VQ3 553 aa18.49■□□□□ 0.55
TMEM47-201ENST00000275954 NGDNQ8NEJ9 315 aaKnown RBP18.49■□□□□ 0.55
TMEM47-201ENST00000275954 BCL2L13Q9BXK5 485 aa18.49■□□□□ 0.55
TMEM47-201ENST00000275954 ASXL2Q76L83 1435 aa18.48■□□□□ 0.55
TMEM47-201ENST00000275954 MYH16Q9H6N6 1097 aa18.48■□□□□ 0.55
TMEM47-201ENST00000275954 RRP1P56182 461 aaKnown RBP18.46■□□□□ 0.55
TMEM47-201ENST00000275954 KIAA1107Q9UPP5 1409 aa18.46■□□□□ 0.55
TMEM47-201ENST00000275954 MAP3K1Q13233 1512 aa18.46■□□□□ 0.55
TMEM47-201ENST00000275954 PDE3BQ13370 1112 aa18.46■□□□□ 0.55
TMEM47-201ENST00000275954 ABCC5O15440 1437 aa18.45■□□□□ 0.54
TMEM47-201ENST00000275954 ANKRD30BQ9BXX2 1392 aa18.44■□□□□ 0.54
TMEM47-201ENST00000275954 SUPT6HQ7KZ85 1726 aaKnown RBP18.44■□□□□ 0.54
TMEM47-201ENST00000275954 CRBNQ96SW2 442 aa18.44■□□□□ 0.54
TMEM47-201ENST00000275954 MAPKBP1O60336 1514 aa18.43■□□□□ 0.54
TMEM47-201ENST00000275954 VGFO15240 615 aaPredicted RBP18.43■□□□□ 0.54
TMEM47-201ENST00000275954 NUP153P49790 1475 aaKnown RBP18.43■□□□□ 0.54
TMEM47-201ENST00000275954 EIF3AQ14152 1382 aaKnown RBP18.42■□□□□ 0.54
TMEM47-201ENST00000275954 ADAMTS8Q9UP79 889 aa18.42■□□□□ 0.54
TMEM47-201ENST00000275954 BECN1Q14457 450 aa18.41■□□□□ 0.54
TMEM47-201ENST00000275954 ADGRL1O94910 1474 aa18.41■□□□□ 0.54
TMEM47-201ENST00000275954 HECW1Q76N89 1606 aa18.41■□□□□ 0.54
TMEM47-201ENST00000275954 TCERG1O14776 1098 aaKnown RBP18.41■□□□□ 0.54
TMEM47-201ENST00000275954 ADAMTS12P58397 1594 aa18.4■□□□□ 0.54
TMEM47-201ENST00000275954 SPRYD3Q8NCJ5 442 aa18.4■□□□□ 0.54
TMEM47-201ENST00000275954 PNISRQ8TF01 805 aaKnown RBP18.4■□□□□ 0.54
TMEM47-201ENST00000275954 HDGFL2Q7Z4V5 671 aaPredicted RBP18.4■□□□□ 0.54
TMEM47-201ENST00000275954 CABP2Q9NPB3 220 aa18.4■□□□□ 0.54
TMEM47-201ENST00000275954 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.53
TMEM47-201ENST00000275954 HSPA2P54652 639 aa18.39■□□□□ 0.53
TMEM47-201ENST00000275954 CCDC9Q9Y3X0 531 aaKnown RBP18.39■□□□□ 0.53
TMEM47-201ENST00000275954 PTPN23Q9H3S7 1636 aa18.39■□□□□ 0.53
TMEM47-201ENST00000275954 XPCQ01831 940 aaPredicted RBP18.38■□□□□ 0.53
TMEM47-201ENST00000275954 PMFBP1Q8TBY8 1022 aa18.38■□□□□ 0.53
TMEM47-201ENST00000275954 AKNAQ7Z591 1439 aa18.37■□□□□ 0.53
TMEM47-201ENST00000275954 RTN4Q9NQC3 1192 aaKnown RBP18.37■□□□□ 0.53
TMEM47-201ENST00000275954 FANCAO15360 1455 aa18.37■□□□□ 0.53
TMEM47-201ENST00000275954 DEKP35659 375 aaKnown RBP18.36■□□□□ 0.53
TMEM47-201ENST00000275954 SLC4A3P48751 1232 aa18.35■□□□□ 0.53
TMEM47-201ENST00000275954 IDI1Q13907 227 aa18.35■□□□□ 0.53
TMEM47-201ENST00000275954 CENPJQ9HC77 1338 aaPredicted RBP18.35■□□□□ 0.53
TMEM47-201ENST00000275954 NCOA1Q15788 1441 aa18.35■□□□□ 0.53
TMEM47-201ENST00000275954 APBB1O00213 710 aa18.34■□□□□ 0.53
TMEM47-201ENST00000275954 ELL2O00472 640 aaPredicted RBP18.34■□□□□ 0.53
TMEM47-201ENST00000275954 CSB-PGBD3P0DP91 1061 aa18.34■□□□□ 0.53
TMEM47-201ENST00000275954 ITPRIPQ8IWB1 547 aa18.34■□□□□ 0.53
TMEM47-201ENST00000275954 COG6Q9Y2V7 657 aa18.34■□□□□ 0.53
TMEM47-201ENST00000275954 DISP1Q96F81 1524 aa18.34■□□□□ 0.53
TMEM47-201ENST00000275954 IPO9Q96P70 1041 aaKnown RBP18.34■□□□□ 0.53
TMEM47-201ENST00000275954 PDE4AP27815 886 aa18.34■□□□□ 0.53
TMEM47-201ENST00000275954 SMC4Q9NTJ3 1288 aa18.34■□□□□ 0.53
TMEM47-201ENST00000275954 ROCK1Q13464 1354 aa18.33■□□□□ 0.53
TMEM47-201ENST00000275954 PLEKHH2Q8IVE3 1493 aa18.33■□□□□ 0.52
TMEM47-201ENST00000275954 TARBP1Q13395 1621 aaKnown RBP18.33■□□□□ 0.52
TMEM47-201ENST00000275954 TERF2IPQ9NYB0 399 aa18.33■□□□□ 0.52
TMEM47-201ENST00000275954 CAMSAP2Q08AD1 1489 aa18.32■□□□□ 0.52
TMEM47-201ENST00000275954 NUP160Q12769 1436 aa18.32■□□□□ 0.52
TMEM47-201ENST00000275954 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
TMEM47-201ENST00000275954 WAPLQ7Z5K2 1190 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms