RNA–Protein interactions for RNA: ENST00000269033.7

SSH2-201, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH2, Length 9,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-201ENST00000269033 SF3A1Q15459 793 aaKnown RBP7.4□□□□□ -1.23
SSH2-201ENST00000269033 AMPHP49418 695 aa7.4□□□□□ -1.23
SSH2-201ENST00000269033 EVA1CP58658 441 aa7.4□□□□□ -1.23
SSH2-201ENST00000269033 C1orf141Q5JVX7 400 aa7.4□□□□□ -1.23
SSH2-201ENST00000269033 DCAF11Q8TEB1 546 aa7.39□□□□□ -1.23
SSH2-201ENST00000269033 SMARCA2P51531 1590 aa7.39□□□□□ -1.23
SSH2-201ENST00000269033 SENP3Q9H4L4 574 aaPredicted RBP7.39□□□□□ -1.23
SSH2-201ENST00000269033 RUFY2Q8WXA3 655 aa7.38□□□□□ -1.23
SSH2-201ENST00000269033 MYO6Q9UM54 1294 aa7.38□□□□□ -1.23
SSH2-201ENST00000269033 ROCK1Q13464 1354 aa7.38□□□□□ -1.23
SSH2-201ENST00000269033 TTC5Q8N0Z6 440 aa7.38□□□□□ -1.23
SSH2-201ENST00000269033 TRIM29Q14134 588 aa7.38□□□□□ -1.23
SSH2-201ENST00000269033 SETD5Q9C0A6 1442 aa7.38□□□□□ -1.23
SSH2-201ENST00000269033 RRP12Q5JTH9 1297 aaKnown RBP7.38□□□□□ -1.23
SSH2-201ENST00000269033 VPS37DQ86XT2 251 aa7.38□□□□□ -1.23
SSH2-201ENST00000269033 TOMM22Q9NS69 142 aa7.38□□□□□ -1.23
SSH2-201ENST00000269033 ODF2Q5BJF6 829 aa7.38□□□□□ -1.23
SSH2-201ENST00000269033 CCDC18Q5T9S5 1454 aa7.38□□□□□ -1.23
SSH2-201ENST00000269033 SOX12O15370 315 aa7.38□□□□□ -1.23
SSH2-201ENST00000269033 CC2D1BQ5T0F9 858 aaKnown RBP7.38□□□□□ -1.23
SSH2-201ENST00000269033 GGT6Q6P531 493 aa7.38□□□□□ -1.23
SSH2-201ENST00000269033 U2AF1L5P0DN76 240 aaPredicted RBP7.37□□□□□ -1.23
SSH2-201ENST00000269033 U2AF1Q01081 240 aaKnown RBP eCLIP7.37□□□□□ -1.23
SSH2-201ENST00000269033 TRIM6-TRIM34B2RNG4 842 aa7.37□□□□□ -1.23
SSH2-201ENST00000269033 NGEFQ8N5V2 710 aa7.37□□□□□ -1.23
SSH2-201ENST00000269033 DDX58O95786 925 aaKnown RBP7.37□□□□□ -1.23
SSH2-201ENST00000269033 NOP58Q9Y2X3 529 aaKnown RBP7.37□□□□□ -1.23
SSH2-201ENST00000269033 TNIKQ9UKE5 1360 aa7.36□□□□□ -1.23
SSH2-201ENST00000269033 H3BQV1 296 aa7.36□□□□□ -1.23
SSH2-201ENST00000269033 IFFO2Q5TF58 517 aa7.36□□□□□ -1.23
SSH2-201ENST00000269033 ZRSR2Q15696 482 aaKnown RBP7.36□□□□□ -1.23
SSH2-201ENST00000269033 ITPRIPQ8IWB1 547 aa7.36□□□□□ -1.23
SSH2-201ENST00000269033 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.36□□□□□ -1.23
SSH2-201ENST00000269033 DNAI2Q9GZS0 605 aa7.36□□□□□ -1.23
SSH2-201ENST00000269033 CCDC173Q0VFZ6 552 aa7.36□□□□□ -1.23
SSH2-201ENST00000269033 CCAR1Q8IX12 1150 aaKnown RBP7.36□□□□□ -1.23
SSH2-201ENST00000269033 MSH5O43196 834 aa7.35□□□□□ -1.23
SSH2-201ENST00000269033 TRDNQ13061 729 aa7.35□□□□□ -1.23
SSH2-201ENST00000269033 SUPT16HQ9Y5B9 1047 aaKnown RBP7.35□□□□□ -1.23
SSH2-201ENST00000269033 TRIM21P19474 475 aaKnown RBP7.35□□□□□ -1.23
SSH2-201ENST00000269033 ERICH2A1L162 156 aa7.35□□□□□ -1.23
SSH2-201ENST00000269033 GOLGA6L19H0YKK7 550 aa7.35□□□□□ -1.23
SSH2-201ENST00000269033 WDHD1O75717 1129 aaPredicted RBP7.35□□□□□ -1.23
SSH2-201ENST00000269033 SF3B2Q13435 895 aaKnown RBP7.35□□□□□ -1.23
SSH2-201ENST00000269033 CT47A1Q5JQC4 288 aaPredicted RBP7.35□□□□□ -1.23
SSH2-201ENST00000269033 FAM184AQ8NB25 1140 aa7.35□□□□□ -1.23
SSH2-201ENST00000269033 RNF20Q5VTR2 975 aa7.34□□□□□ -1.23
SSH2-201ENST00000269033 RBM33Q96EV2 1170 aaKnown RBP7.34□□□□□ -1.23
SSH2-201ENST00000269033 WASHC2CQ9Y4E1 1318 aa7.34□□□□□ -1.23
SSH2-201ENST00000269033 BRMS1Q9HCU9 246 aa7.34□□□□□ -1.23
SSH2-201ENST00000269033 PES1O00541 588 aaKnown RBP7.34□□□□□ -1.23
SSH2-201ENST00000269033 STK26Q9P289 416 aa7.34□□□□□ -1.23
SSH2-201ENST00000269033 CCER2I3L3R5 266 aa7.34□□□□□ -1.23
SSH2-201ENST00000269033 PDE3BQ13370 1112 aa7.34□□□□□ -1.24
SSH2-201ENST00000269033 CARMIL1Q5VZK9 1371 aa7.33□□□□□ -1.24
SSH2-201ENST00000269033 XBP1P17861 261 aa7.33□□□□□ -1.24
SSH2-201ENST00000269033 TEFQ10587 303 aa7.33□□□□□ -1.24
SSH2-201ENST00000269033 ZKSCAN1P17029 563 aaPredicted RBP7.33□□□□□ -1.24
SSH2-201ENST00000269033 SAFBQ15424 915 aaKnown RBP eCLIP7.33□□□□□ -1.24
SSH2-201ENST00000269033 ACBD3Q9H3P7 528 aa7.33□□□□□ -1.24
SSH2-201ENST00000269033 MFAP1P55081 439 aaKnown RBP7.33□□□□□ -1.24
SSH2-201ENST00000269033 CALRP27797 417 aaKnown RBP7.33□□□□□ -1.24
SSH2-201ENST00000269033 DESP17661 470 aa7.32□□□□□ -1.24
SSH2-201ENST00000269033 HSP90AB4PQ58FF6 505 aa7.32□□□□□ -1.24
SSH2-201ENST00000269033 DCTN1Q14203 1278 aa7.32□□□□□ -1.24
SSH2-201ENST00000269033 DDX11L8A8MPP1 907 aa7.32□□□□□ -1.24
SSH2-201ENST00000269033 VGFO15240 615 aaPredicted RBP7.32□□□□□ -1.24
SSH2-201ENST00000269033 SLC3A2P08195 630 aaKnown RBP7.32□□□□□ -1.24
SSH2-201ENST00000269033 STAC3Q96MF2 364 aa7.32□□□□□ -1.24
SSH2-201ENST00000269033 BECN2A8MW95 431 aa7.32□□□□□ -1.24
SSH2-201ENST00000269033 CREBRFQ8IUR6 639 aa7.32□□□□□ -1.24
SSH2-201ENST00000269033 ABCC8Q09428 1581 aa7.32□□□□□ -1.24
SSH2-201ENST00000269033 CGNL1Q0VF96 1302 aa7.32□□□□□ -1.24
SSH2-201ENST00000269033 SKOR2Q2VWA4 1001 aaPredicted RBP7.31□□□□□ -1.24
SSH2-201ENST00000269033 COG3Q96JB2 828 aa7.31□□□□□ -1.24
SSH2-201ENST00000269033 CUX2O14529 1486 aa7.31□□□□□ -1.24
SSH2-201ENST00000269033 CPLX1O14810 134 aa7.31□□□□□ -1.24
SSH2-201ENST00000269033 REC8O95072 547 aa7.31□□□□□ -1.24
SSH2-201ENST00000269033 ANKRD18AQ8IVF6 992 aa7.31□□□□□ -1.24
SSH2-201ENST00000269033 TXLNBQ8N3L3 684 aa7.31□□□□□ -1.24
SSH2-201ENST00000269033 DHX8Q14562 1220 aaKnown RBP7.31□□□□□ -1.24
SSH2-201ENST00000269033 AK7Q96M32 723 aa7.31□□□□□ -1.24
SSH2-201ENST00000269033 IRX6P78412 446 aaPredicted RBP7.31□□□□□ -1.24
SSH2-201ENST00000269033 PAF1Q8N7H5 531 aa7.31□□□□□ -1.24
SSH2-201ENST00000269033 SAFB2Q14151 953 aaKnown RBP eCLIP7.31□□□□□ -1.24
SSH2-201ENST00000269033 EVC2Q86UK5 1308 aa7.3□□□□□ -1.24
SSH2-201ENST00000269033 DHX16O60231 1041 aaKnown RBP7.3□□□□□ -1.24
SSH2-201ENST00000269033 DIAPH3Q9NSV4 1193 aa7.3□□□□□ -1.24
SSH2-201ENST00000269033 EPS15P42566 896 aa7.3□□□□□ -1.24
SSH2-201ENST00000269033 NUP155O75694 1391 aa7.3□□□□□ -1.24
SSH2-201ENST00000269033 C9orf78Q9NZ63 289 aaPredicted RBP7.3□□□□□ -1.24
SSH2-201ENST00000269033 MIA2Q96PC5 1412 aa7.29□□□□□ -1.24
SSH2-201ENST00000269033 ATF3P18847 181 aa7.29□□□□□ -1.24
SSH2-201ENST00000269033 PIP4K2AP48426 406 aaPredicted RBP7.29□□□□□ -1.24
SSH2-201ENST00000269033 RUFY1Q96T51 708 aa7.29□□□□□ -1.24
SSH2-201ENST00000269033 PHF23Q9BUL5 403 aaPredicted RBP7.29□□□□□ -1.24
SSH2-201ENST00000269033 PDE4CQ08493 712 aa7.29□□□□□ -1.24
SSH2-201ENST00000269033 TEX35Q5T0J7 233 aa7.29□□□□□ -1.24
SSH2-201ENST00000269033 AAMPQ13685 434 aa7.29□□□□□ -1.24
SSH2-201ENST00000269033 SART3Q15020 963 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms