RNA–Protein interactions for RNA: ENST00000265734.8

CDK6-201, Transcript of cyclin dependent kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK6, Length 11,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK6-201ENST00000265734 CCDC39Q9UFE4 941 aa12.78□□□□□ -0.36
CDK6-201ENST00000265734 USP8P40818 1118 aa12.78□□□□□ -0.36
CDK6-201ENST00000265734 ERCC4Q92889 916 aaPredicted RBP12.78□□□□□ -0.36
CDK6-201ENST00000265734 RTF1Q92541 710 aaKnown RBP12.78□□□□□ -0.36
CDK6-201ENST00000265734 GOLGA6L7A0A1B0GV03 622 aa12.77□□□□□ -0.36
CDK6-201ENST00000265734 ABCC9O60706 1549 aa12.77□□□□□ -0.37
CDK6-201ENST00000265734 IFT57Q9NWB7 429 aa12.77□□□□□ -0.37
CDK6-201ENST00000265734 CENPQQ7L2Z9 268 aaPredicted RBP12.76□□□□□ -0.37
CDK6-201ENST00000265734 FHAD1B1AJZ9 1412 aa12.76□□□□□ -0.37
CDK6-201ENST00000265734 RRP9O43818 475 aaKnown RBP12.76□□□□□ -0.37
CDK6-201ENST00000265734 SPAG9O60271 1321 aaKnown RBP12.75□□□□□ -0.37
CDK6-201ENST00000265734 DYDC1Q8WWB3 177 aa12.75□□□□□ -0.37
CDK6-201ENST00000265734 CCNB3Q8WWL7 1395 aa12.75□□□□□ -0.37
CDK6-201ENST00000265734 MORC1Q86VD1 984 aa12.75□□□□□ -0.37
CDK6-201ENST00000265734 NAT10Q9H0A0 1025 aaKnown RBP12.75□□□□□ -0.37
CDK6-201ENST00000265734 CAGE1Q8TC20 777 aa12.75□□□□□ -0.37
CDK6-201ENST00000265734 PDE3BQ13370 1112 aa12.75□□□□□ -0.37
CDK6-201ENST00000265734 ROCK2O75116 1388 aaKnown RBP12.75□□□□□ -0.37
CDK6-201ENST00000265734 ZRSR2Q15696 482 aaKnown RBP12.74□□□□□ -0.37
CDK6-201ENST00000265734 CCP110O43303 1012 aa12.74□□□□□ -0.37
CDK6-201ENST00000265734 KIAA0754O94854 1291 aa12.74□□□□□ -0.37
CDK6-201ENST00000265734 REC8O95072 547 aa12.74□□□□□ -0.37
CDK6-201ENST00000265734 NASPP49321 788 aaPredicted RBP12.74□□□□□ -0.37
CDK6-201ENST00000265734 KANK1Q14678 1352 aa12.74□□□□□ -0.37
CDK6-201ENST00000265734 NEXNQ0ZGT2 675 aa12.74□□□□□ -0.37
CDK6-201ENST00000265734 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
CDK6-201ENST00000265734 PABPN1Q86U42 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDK6-201ENST00000265734 CCDC173Q0VFZ6 552 aa12.73□□□□□ -0.37
CDK6-201ENST00000265734 DEF6Q9H4E7 631 aa12.73□□□□□ -0.37
CDK6-201ENST00000265734 HSP90AB3PQ58FF7 597 aa12.73□□□□□ -0.37
CDK6-201ENST00000265734 GORABQ5T7V8 394 aa12.73□□□□□ -0.37
CDK6-201ENST00000265734 TSPYL1Q9H0U9 437 aa12.73□□□□□ -0.37
CDK6-201ENST00000265734 CGNL1Q0VF96 1302 aa12.72□□□□□ -0.37
CDK6-201ENST00000265734 ARHGAP35Q9NRY4 1499 aa12.72□□□□□ -0.37
CDK6-201ENST00000265734 CENPJQ9HC77 1338 aaPredicted RBP12.72□□□□□ -0.37
CDK6-201ENST00000265734 NOL8Q76FK4 1167 aaKnown RBP12.72□□□□□ -0.37
CDK6-201ENST00000265734 STK31Q9BXU1 1019 aa12.71□□□□□ -0.37
CDK6-201ENST00000265734 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
CDK6-201ENST00000265734 SMC4Q9NTJ3 1288 aa12.71□□□□□ -0.37
CDK6-201ENST00000265734 NEFHP12036 1026 aa12.71□□□□□ -0.38
CDK6-201ENST00000265734 MRE11P49959 708 aa12.7□□□□□ -0.38
CDK6-201ENST00000265734 CFDP1Q9UEE9 299 aaPredicted RBP12.69□□□□□ -0.38
CDK6-201ENST00000265734 FAM184AQ8NB25 1140 aa12.69□□□□□ -0.38
CDK6-201ENST00000265734 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK6-201ENST00000265734 GOLGA6L10A6NI86 522 aa12.69□□□□□ -0.38
CDK6-201ENST00000265734 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
CDK6-201ENST00000265734 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
CDK6-201ENST00000265734 DHX8Q14562 1220 aaKnown RBP12.69□□□□□ -0.38
CDK6-201ENST00000265734 PDE4AP27815 886 aa12.68□□□□□ -0.38
CDK6-201ENST00000265734 SETD5Q9C0A6 1442 aa12.68□□□□□ -0.38
CDK6-201ENST00000265734 LRRFIP1Q32MZ4 808 aaKnown RBP12.68□□□□□ -0.38
CDK6-201ENST00000265734 MEX3CQ5U5Q3 659 aaKnown RBP12.67□□□□□ -0.38
CDK6-201ENST00000265734 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
CDK6-201ENST00000265734 PCMTD1Q96MG8 357 aaPredicted RBP12.67□□□□□ -0.38
CDK6-201ENST00000265734 VPS53Q5VIR6 699 aa12.67□□□□□ -0.38
CDK6-201ENST00000265734 ANO8Q9HCE9 1232 aaPredicted RBP12.67□□□□□ -0.38
CDK6-201ENST00000265734 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
CDK6-201ENST00000265734 AKAP17AQ02040 695 aaKnown RBP12.67□□□□□ -0.38
CDK6-201ENST00000265734 MCTP1Q6DN14 999 aa12.66□□□□□ -0.38
CDK6-201ENST00000265734 AXDND1Q5T1B0 1012 aaPredicted RBP12.66□□□□□ -0.38
CDK6-201ENST00000265734 MARCH6O60337 910 aa12.66□□□□□ -0.38
CDK6-201ENST00000265734 CCDC47Q96A33 483 aaKnown RBP12.66□□□□□ -0.38
CDK6-201ENST00000265734 PLCD4Q9BRC7 762 aa12.66□□□□□ -0.38
CDK6-201ENST00000265734 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
CDK6-201ENST00000265734 SASS6Q6UVJ0 657 aa12.65□□□□□ -0.38
CDK6-201ENST00000265734 NUCB2P80303 420 aa12.65□□□□□ -0.38
CDK6-201ENST00000265734 CAVIN1Q6NZI2 390 aaKnown RBP12.65□□□□□ -0.38
CDK6-201ENST00000265734 TCEAL9Q9UHQ7 104 aa12.65□□□□□ -0.38
CDK6-201ENST00000265734 BICD2Q8TD16 824 aa12.64□□□□□ -0.39
CDK6-201ENST00000265734 NAP1L1P55209 391 aaKnown RBP12.64□□□□□ -0.39
CDK6-201ENST00000265734 LMOD3Q0VAK6 560 aa12.64□□□□□ -0.39
CDK6-201ENST00000265734 ZBED9Q6R2W3 1325 aa12.64□□□□□ -0.39
CDK6-201ENST00000265734 CT47A1Q5JQC4 288 aaPredicted RBP12.64□□□□□ -0.39
CDK6-201ENST00000265734 PLEKHD1A6NEE1 506 aa12.64□□□□□ -0.39
CDK6-201ENST00000265734 LETM1O95202 739 aaPredicted RBP12.64□□□□□ -0.39
CDK6-201ENST00000265734 CHMP5Q9NZZ3 219 aa12.64□□□□□ -0.39
CDK6-201ENST00000265734 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
CDK6-201ENST00000265734 KIF27Q86VH2 1401 aa12.64□□□□□ -0.39
CDK6-201ENST00000265734 SENP3Q9H4L4 574 aaPredicted RBP12.63□□□□□ -0.39
CDK6-201ENST00000265734 R3HCC1Q9Y3T6 440 aaKnown RBP12.63□□□□□ -0.39
CDK6-201ENST00000265734 KIF7Q2M1P5 1343 aa12.63□□□□□ -0.39
CDK6-201ENST00000265734 KIF15Q9NS87 1388 aa12.63□□□□□ -0.39
CDK6-201ENST00000265734 CPLX2Q6PUV4 134 aaKnown RBP12.63□□□□□ -0.39
CDK6-201ENST00000265734 EIF3JO75822 258 aaKnown RBP12.63□□□□□ -0.39
CDK6-201ENST00000265734 TRIM29Q14134 588 aa12.63□□□□□ -0.39
CDK6-201ENST00000265734 CT47B1P0C2W7 299 aaPredicted RBP12.63□□□□□ -0.39
CDK6-201ENST00000265734 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
CDK6-201ENST00000265734 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDK6-201ENST00000265734 ODF2Q5BJF6 829 aa12.62□□□□□ -0.39
CDK6-201ENST00000265734 ROCK1Q13464 1354 aa12.62□□□□□ -0.39
CDK6-201ENST00000265734 RUFY2Q8WXA3 655 aa12.62□□□□□ -0.39
CDK6-201ENST00000265734 ZKSCAN1P17029 563 aaPredicted RBP12.62□□□□□ -0.39
CDK6-201ENST00000265734 SRPK2P78362 688 aaKnown RBP12.62□□□□□ -0.39
CDK6-201ENST00000265734 TMX4Q9H1E5 349 aaPredicted RBP12.62□□□□□ -0.39
CDK6-201ENST00000265734 CCDC73Q6ZRK6 1079 aa12.62□□□□□ -0.39
CDK6-201ENST00000265734 DCAF11Q8TEB1 546 aa12.62□□□□□ -0.39
CDK6-201ENST00000265734 CHMP3Q9Y3E7 222 aa12.61□□□□□ -0.39
CDK6-201ENST00000265734 ERLIN1O75477 346 aa12.61□□□□□ -0.39
CDK6-201ENST00000265734 NLRP13Q86W25 1043 aa12.61□□□□□ -0.39
CDK6-201ENST00000265734 ERLIN2O94905 339 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms