RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 PDE4CQ08493 712 aa13.28□□□□□ -0.28
CPT1A-201ENST00000265641 NCBP3Q53F19 620 aaKnown RBP13.28□□□□□ -0.28
CPT1A-201ENST00000265641 FMN1Q68DA7 1419 aa13.28□□□□□ -0.28
CPT1A-201ENST00000265641 R3HCC1Q9Y3T6 440 aaKnown RBP13.27□□□□□ -0.29
CPT1A-201ENST00000265641 ST18O60284 1047 aa13.26□□□□□ -0.29
CPT1A-201ENST00000265641 L3MBTL2Q969R5 705 aa13.26□□□□□ -0.29
CPT1A-201ENST00000265641 MPHOSPH9Q99550 1183 aa13.26□□□□□ -0.29
CPT1A-201ENST00000265641 CFTRP13569 1480 aa13.26□□□□□ -0.29
CPT1A-201ENST00000265641 ARGLU1Q9NWB6 273 aaPredicted RBP13.26□□□□□ -0.29
CPT1A-201ENST00000265641 GOLGA2Q08379 1002 aa13.26□□□□□ -0.29
CPT1A-201ENST00000265641 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
CPT1A-201ENST00000265641 MFAP1P55081 439 aaKnown RBP13.25□□□□□ -0.29
CPT1A-201ENST00000265641 C11orf95C9JLR9 678 aaPredicted RBP13.25□□□□□ -0.29
CPT1A-201ENST00000265641 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
CPT1A-201ENST00000265641 PLEKHD1A6NEE1 506 aa13.25□□□□□ -0.29
CPT1A-201ENST00000265641 MSH5O43196 834 aa13.25□□□□□ -0.29
CPT1A-201ENST00000265641 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
CPT1A-201ENST00000265641 NASPP49321 788 aaPredicted RBP13.24□□□□□ -0.29
CPT1A-201ENST00000265641 RUSC2Q8N2Y8 1516 aa13.24□□□□□ -0.29
CPT1A-201ENST00000265641 NGEFQ8N5V2 710 aa13.24□□□□□ -0.29
CPT1A-201ENST00000265641 PDCL2Q8N4E4 241 aa13.24□□□□□ -0.29
CPT1A-201ENST00000265641 ATP6V1DQ9Y5K8 247 aa13.24□□□□□ -0.29
CPT1A-201ENST00000265641 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
CPT1A-201ENST00000265641 STAG3Q9UJ98 1225 aa13.23□□□□□ -0.29
CPT1A-201ENST00000265641 ESPNB1AK53 854 aa13.23□□□□□ -0.29
CPT1A-201ENST00000265641 NUCB2P80303 420 aa13.23□□□□□ -0.29
CPT1A-201ENST00000265641 MYBBP1AQ9BQG0 1328 aaKnown RBP13.22□□□□□ -0.29
CPT1A-201ENST00000265641 FANCD2Q9BXW9 1451 aa13.21□□□□□ -0.29
CPT1A-201ENST00000265641 KIF3AQ9Y496 699 aa13.21□□□□□ -0.29
CPT1A-201ENST00000265641 FOXD1Q16676 465 aa13.21□□□□□ -0.29
CPT1A-201ENST00000265641 ACBD3Q9H3P7 528 aa13.2□□□□□ -0.3
CPT1A-201ENST00000265641 TRAK2O60296 914 aa13.2□□□□□ -0.3
CPT1A-201ENST00000265641 KIAA1211Q6ZU35 1233 aa13.19□□□□□ -0.3
CPT1A-201ENST00000265641 CRBNQ96SW2 442 aa13.19□□□□□ -0.3
CPT1A-201ENST00000265641 BACH2Q9BYV9 841 aa13.19□□□□□ -0.3
CPT1A-201ENST00000265641 PKD2Q13563 968 aa13.18□□□□□ -0.3
CPT1A-201ENST00000265641 ZBTB7CA1YPR0 619 aa13.18□□□□□ -0.3
CPT1A-201ENST00000265641 CAVIN1Q6NZI2 390 aaKnown RBP13.18□□□□□ -0.3
CPT1A-201ENST00000265641 PLIN1O60240 522 aa13.17□□□□□ -0.3
CPT1A-201ENST00000265641 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
CPT1A-201ENST00000265641 U2SURPO15042 1029 aaKnown RBP13.16□□□□□ -0.3
CPT1A-201ENST00000265641 LETM1O95202 739 aaPredicted RBP13.16□□□□□ -0.3
CPT1A-201ENST00000265641 GRPEL1Q9HAV7 217 aa13.16□□□□□ -0.3
CPT1A-201ENST00000265641 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
CPT1A-201ENST00000265641 ZSCAN30Q86W11 494 aa13.15□□□□□ -0.3
CPT1A-201ENST00000265641 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
CPT1A-201ENST00000265641 UQCRHLA0A096LP55 91 aa13.15□□□□□ -0.31
CPT1A-201ENST00000265641 UQCRHP07919 91 aa13.15□□□□□ -0.31
CPT1A-201ENST00000265641 USP8P40818 1118 aa13.14□□□□□ -0.31
CPT1A-201ENST00000265641 DHX8Q14562 1220 aaKnown RBP13.14□□□□□ -0.31
CPT1A-201ENST00000265641 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
CPT1A-201ENST00000265641 MBD3O95983 291 aa13.14□□□□□ -0.31
CPT1A-201ENST00000265641 ITPRIPQ8IWB1 547 aa13.14□□□□□ -0.31
CPT1A-201ENST00000265641 CCDC34Q96HJ3 373 aa13.14□□□□□ -0.31
CPT1A-201ENST00000265641 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
CPT1A-201ENST00000265641 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
CPT1A-201ENST00000265641 KCNJ4P48050 445 aa13.14□□□□□ -0.31
CPT1A-201ENST00000265641 CNTLNQ9NXG0 1405 aa13.13□□□□□ -0.31
CPT1A-201ENST00000265641 NOC3LQ8WTT2 800 aaKnown RBP13.13□□□□□ -0.31
CPT1A-201ENST00000265641 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
CPT1A-201ENST00000265641 CALCOCO1Q9P1Z2 691 aa13.13□□□□□ -0.31
CPT1A-201ENST00000265641 PRXQ9BXM0 1461 aa13.12□□□□□ -0.31
CPT1A-201ENST00000265641 CLCN1P35523 988 aa13.12□□□□□ -0.31
CPT1A-201ENST00000265641 CHMP7Q8WUX9 453 aaPredicted RBP13.12□□□□□ -0.31
CPT1A-201ENST00000265641 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
CPT1A-201ENST00000265641 FGD1P98174 961 aa13.12□□□□□ -0.31
CPT1A-201ENST00000265641 BIVM-ERCC5R4GMW8 1640 aa13.12□□□□□ -0.31
CPT1A-201ENST00000265641 GOLGA6L19H0YKK7 550 aa13.12□□□□□ -0.31
CPT1A-201ENST00000265641 CCDC70Q6NSX1 233 aa13.12□□□□□ -0.31
CPT1A-201ENST00000265641 CHMP4CQ96CF2 233 aa13.11□□□□□ -0.31
CPT1A-201ENST00000265641 AK7Q96M32 723 aa13.11□□□□□ -0.31
CPT1A-201ENST00000265641 MCM5P33992 734 aa13.11□□□□□ -0.31
CPT1A-201ENST00000265641 RBM10P98175 930 aaKnown RBP13.11□□□□□ -0.31
CPT1A-201ENST00000265641 RNF20Q5VTR2 975 aa13.1□□□□□ -0.31
CPT1A-201ENST00000265641 SASS6Q6UVJ0 657 aa13.1□□□□□ -0.31
CPT1A-201ENST00000265641 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
CPT1A-201ENST00000265641 E9PSI1 815 aa13.1□□□□□ -0.31
CPT1A-201ENST00000265641 RDXP35241 583 aaKnown RBP13.1□□□□□ -0.31
CPT1A-201ENST00000265641 IGF1RP08069 1367 aa13.09□□□□□ -0.31
CPT1A-201ENST00000265641 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
CPT1A-201ENST00000265641 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
CPT1A-201ENST00000265641 CLUAP1Q96AJ1 413 aa13.09□□□□□ -0.31
CPT1A-201ENST00000265641 DYNC1I1O14576 645 aa13.09□□□□□ -0.31
CPT1A-201ENST00000265641 CUX1P39880 1505 aa13.09□□□□□ -0.31
CPT1A-201ENST00000265641 ERCC4Q92889 916 aaPredicted RBP13.08□□□□□ -0.31
CPT1A-201ENST00000265641 LEKR1Q6ZMV7 388 aa13.08□□□□□ -0.32
CPT1A-201ENST00000265641 CCP110O43303 1012 aa13.08□□□□□ -0.32
CPT1A-201ENST00000265641 DEF6Q9H4E7 631 aa13.08□□□□□ -0.32
CPT1A-201ENST00000265641 HSP90B2PQ58FF3 399 aa13.07□□□□□ -0.32
CPT1A-201ENST00000265641 ESF1Q9H501 851 aaKnown RBP13.07□□□□□ -0.32
CPT1A-201ENST00000265641 SMC4Q9NTJ3 1288 aa13.07□□□□□ -0.32
CPT1A-201ENST00000265641 GTPBP4Q9BZE4 634 aaKnown RBP13.07□□□□□ -0.32
CPT1A-201ENST00000265641 CCDC18Q5T9S5 1454 aa13.07□□□□□ -0.32
CPT1A-201ENST00000265641 C22orf23Q9BZE7 217 aa13.07□□□□□ -0.32
CPT1A-201ENST00000265641 HMMRO75330 724 aa13.07□□□□□ -0.32
CPT1A-201ENST00000265641 ANKRD30AQ9BXX3 1397 aa13.07□□□□□ -0.32
CPT1A-201ENST00000265641 NINLQ9Y2I6 1382 aa13.06□□□□□ -0.32
CPT1A-201ENST00000265641 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
CPT1A-201ENST00000265641 ST20-MTHFSA0A0A6YYL1 179 aa13.05□□□□□ -0.32
CPT1A-201ENST00000265641 MNS1Q8NEH6 495 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms