RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 CHMP5Q9NZZ3 219 aa14.6□□□□□ -0.07
DNMT3A-201ENST00000264709 KIF7Q2M1P5 1343 aa14.6□□□□□ -0.07
DNMT3A-201ENST00000264709 C11orf95C9JLR9 678 aaPredicted RBP14.6□□□□□ -0.07
DNMT3A-201ENST00000264709 CC2D1BQ5T0F9 858 aaKnown RBP14.6□□□□□ -0.07
DNMT3A-201ENST00000264709 CFAP43Q8NDM7 1665 aa14.6□□□□□ -0.07
DNMT3A-201ENST00000264709 HMGXB3Q12766 1538 aa14.59□□□□□ -0.07
DNMT3A-201ENST00000264709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.59□□□□□ -0.076e-7■■□□□ 13.3
DNMT3A-201ENST00000264709 THOC2Q8NI27 1593 aaKnown RBP14.59□□□□□ -0.07
DNMT3A-201ENST00000264709 ST18O60284 1047 aa14.59□□□□□ -0.07
DNMT3A-201ENST00000264709 CARMIL2Q6F5E8 1435 aa14.58□□□□□ -0.07
DNMT3A-201ENST00000264709 SCAPERQ9BY12 1400 aa14.58□□□□□ -0.08
DNMT3A-201ENST00000264709 ATP6V1DQ9Y5K8 247 aa14.58□□□□□ -0.08
DNMT3A-201ENST00000264709 AKNAQ7Z591 1439 aa14.58□□□□□ -0.08
DNMT3A-201ENST00000264709 NCOA2Q15596 1464 aa14.58□□□□□ -0.08
DNMT3A-201ENST00000264709 HMGN5P82970 282 aaKnown RBP14.57□□□□□ -0.08
DNMT3A-201ENST00000264709 GZF1Q9H116 711 aaPredicted RBP14.57□□□□□ -0.08
DNMT3A-201ENST00000264709 HTATSF1O43719 755 aaKnown RBP14.57□□□□□ -0.08
DNMT3A-201ENST00000264709 KIF16BQ96L93 1317 aa14.55□□□□□ -0.08
DNMT3A-201ENST00000264709 GOLGA6L4A6NEF3 574 aa14.55□□□□□ -0.08
DNMT3A-201ENST00000264709 CHMP4AQ9BY43 222 aa14.55□□□□□ -0.08
DNMT3A-201ENST00000264709 EXOC6Q8TAG9 804 aa14.55□□□□□ -0.08
DNMT3A-201ENST00000264709 CADPSQ9ULU8 1353 aa14.54□□□□□ -0.08
DNMT3A-201ENST00000264709 KIF21AQ7Z4S6 1674 aa14.54□□□□□ -0.08
DNMT3A-201ENST00000264709 CHMP7Q8WUX9 453 aaPredicted RBP14.54□□□□□ -0.08
DNMT3A-201ENST00000264709 TAF3Q5VWG9 929 aa14.53□□□□□ -0.08
DNMT3A-201ENST00000264709 CC2D2AQ9P2K1 1620 aa14.52□□□□□ -0.08
DNMT3A-201ENST00000264709 MSH5O43196 834 aa14.52□□□□□ -0.09
DNMT3A-201ENST00000264709 PTPN23Q9H3S7 1636 aa14.51□□□□□ -0.09
DNMT3A-201ENST00000264709 RGL3Q3MIN7 710 aa14.51□□□□□ -0.09
DNMT3A-201ENST00000264709 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
DNMT3A-201ENST00000264709 NUCB2P80303 420 aa14.5□□□□□ -0.09
DNMT3A-201ENST00000264709 CIZ1Q9ULV3 898 aaPredicted RBP14.5□□□□□ -0.09
DNMT3A-201ENST00000264709 MORC1Q86VD1 984 aa14.5□□□□□ -0.09
DNMT3A-201ENST00000264709 MAPKBP1O60336 1514 aa14.5□□□□□ -0.09
DNMT3A-201ENST00000264709 NCOA1Q15788 1441 aa14.49□□□□□ -0.09
DNMT3A-201ENST00000264709 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
DNMT3A-201ENST00000264709 ANO8Q9HCE9 1232 aaPredicted RBP14.49□□□□□ -0.09
DNMT3A-201ENST00000264709 HMMRO75330 724 aa14.49□□□□□ -0.09
DNMT3A-201ENST00000264709 CCDC173Q0VFZ6 552 aa14.49□□□□□ -0.09
DNMT3A-201ENST00000264709 PCF11O94913 1555 aaKnown RBP14.49□□□□□ -0.09
DNMT3A-201ENST00000264709 PAK3O75914 559 aaPredicted RBP14.48□□□□□ -0.09
DNMT3A-201ENST00000264709 BRPF3Q9ULD4 1205 aa14.48□□□□□ -0.09
DNMT3A-201ENST00000264709 REC8O95072 547 aa14.48□□□□□ -0.09
DNMT3A-201ENST00000264709 ROCK1Q13464 1354 aa14.48□□□□□ -0.09
DNMT3A-201ENST00000264709 DDX19BQ9UMR2 479 aa14.48□□□□□ -0.09
DNMT3A-201ENST00000264709 PDE3AQ14432 1141 aa14.48□□□□□ -0.09
DNMT3A-201ENST00000264709 DDX49Q9Y6V7 483 aaKnown RBP14.48□□□□□ -0.09
DNMT3A-201ENST00000264709 TPM3P06753 285 aa14.47□□□□□ -0.09
DNMT3A-201ENST00000264709 NASPP49321 788 aaPredicted RBP14.47□□□□□ -0.09
DNMT3A-201ENST00000264709 IGF1RP08069 1367 aa14.47□□□□□ -0.09
DNMT3A-201ENST00000264709 MFAP1P55081 439 aaKnown RBP14.47□□□□□ -0.09
DNMT3A-201ENST00000264709 CRBNQ96SW2 442 aa14.47□□□□□ -0.09
DNMT3A-201ENST00000264709 ITPRIPQ8IWB1 547 aa14.46□□□□□ -0.09
DNMT3A-201ENST00000264709 ST20-MTHFSA0A0A6YYL1 179 aa14.46□□□□□ -0.09
DNMT3A-201ENST00000264709 CLUAP1Q96AJ1 413 aa14.46□□□□□ -0.1
DNMT3A-201ENST00000264709 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.1
DNMT3A-201ENST00000264709 CTTNBP2Q8WZ74 1663 aa14.46□□□□□ -0.1
DNMT3A-201ENST00000264709 IL27Q8NEV9 243 aa14.45□□□□□ -0.1
DNMT3A-201ENST00000264709 PNISRQ8TF01 805 aaKnown RBP14.45□□□□□ -0.1
DNMT3A-201ENST00000264709 CT47B1P0C2W7 299 aaPredicted RBP14.45□□□□□ -0.1
DNMT3A-201ENST00000264709 CCDC39Q9UFE4 941 aa14.45□□□□□ -0.1
DNMT3A-201ENST00000264709 MBD3O95983 291 aa14.45□□□□□ -0.1
DNMT3A-201ENST00000264709 ZKSCAN2Q63HK3 967 aa14.45□□□□□ -0.1
DNMT3A-201ENST00000264709 CFTRP13569 1480 aa14.44□□□□□ -0.1
DNMT3A-201ENST00000264709 DRC7Q8IY82 874 aa14.44□□□□□ -0.1
DNMT3A-201ENST00000264709 CHGAP10645 457 aaKnown RBP14.44□□□□□ -0.1
DNMT3A-201ENST00000264709 TNNT3P45378 269 aaPredicted RBP14.44□□□□□ -0.1
DNMT3A-201ENST00000264709 NEUROD2Q15784 382 aa14.44□□□□□ -0.1
DNMT3A-201ENST00000264709 NAIPQ13075 1403 aa14.44□□□□□ -0.1
DNMT3A-201ENST00000264709 HDAC5Q9UQL6 1122 aa14.44□□□□□ -0.1
DNMT3A-201ENST00000264709 LMOD3Q0VAK6 560 aa14.43□□□□□ -0.1
DNMT3A-201ENST00000264709 KIAA1211Q6ZU35 1233 aa14.43□□□□□ -0.1
DNMT3A-201ENST00000264709 DIAPH3Q9NSV4 1193 aa14.43□□□□□ -0.1
DNMT3A-201ENST00000264709 NCAPD3P42695 1498 aa14.43□□□□□ -0.1
DNMT3A-201ENST00000264709 ESPNB1AK53 854 aa14.42□□□□□ -0.1
DNMT3A-201ENST00000264709 CHMP4CQ96CF2 233 aa14.42□□□□□ -0.1
DNMT3A-201ENST00000264709 SMC4Q9NTJ3 1288 aa14.42□□□□□ -0.1
DNMT3A-201ENST00000264709 CCDC66A2RUB6 948 aa14.41□□□□□ -0.1
DNMT3A-201ENST00000264709 PLCB2Q00722 1185 aa14.41□□□□□ -0.1
DNMT3A-201ENST00000264709 C22orf23Q9BZE7 217 aa14.41□□□□□ -0.1
DNMT3A-201ENST00000264709 ITSN2Q9NZM3 1697 aa14.41□□□□□ -0.1
DNMT3A-201ENST00000264709 FOXD1Q16676 465 aa14.4□□□□□ -0.1
DNMT3A-201ENST00000264709 FRAT2O75474 233 aaPredicted RBP14.4□□□□□ -0.1
DNMT3A-201ENST00000264709 SPRYD3Q8NCJ5 442 aa14.4□□□□□ -0.1
DNMT3A-201ENST00000264709 KIF3AQ9Y496 699 aa14.4□□□□□ -0.1
DNMT3A-201ENST00000264709 KIAA1107Q9UPP5 1409 aa14.4□□□□□ -0.1
DNMT3A-201ENST00000264709 POLA1P09884 1462 aaPredicted RBP14.39□□□□□ -0.11
DNMT3A-201ENST00000264709 DHX29Q7Z478 1369 aaKnown RBP14.39□□□□□ -0.11
DNMT3A-201ENST00000264709 DHX8Q14562 1220 aaKnown RBP14.39□□□□□ -0.11
DNMT3A-201ENST00000264709 PDCL3Q9H2J4 239 aa14.39□□□□□ -0.11
DNMT3A-201ENST00000264709 GPS2Q13227 327 aa14.39□□□□□ -0.11
DNMT3A-201ENST00000264709 TRAK2O60296 914 aa14.38□□□□□ -0.11
DNMT3A-201ENST00000264709 RPRD2Q5VT52 1461 aaKnown RBP14.38□□□□□ -0.11
DNMT3A-201ENST00000264709 CCDC34Q96HJ3 373 aa14.38□□□□□ -0.11
DNMT3A-201ENST00000264709 FAM13BQ9NYF5 915 aa14.38□□□□□ -0.11
DNMT3A-201ENST00000264709 MCM5P33992 734 aa14.38□□□□□ -0.11
DNMT3A-201ENST00000264709 TPM4P67936 248 aa14.38□□□□□ -0.11
DNMT3A-201ENST00000264709 ANKRD50Q9ULJ7 1429 aa14.38□□□□□ -0.11
DNMT3A-201ENST00000264709 FANCD2Q9BXW9 1451 aa14.37□□□□□ -0.11
DNMT3A-201ENST00000264709 FAM184AQ8NB25 1140 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms