RNA–Protein interactions for RNA: ENST00000262919.9

ATRN-201, Transcript of attractin, humanhuman

APPRIS P4 TSL 5 BASIC

Gene ATRN, Length 8,633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-201ENST00000262919 MARCH6O60337 910 aa22.78■■□□□ 1.24
ATRN-201ENST00000262919 BECN2A8MW95 431 aa22.78■■□□□ 1.24
ATRN-201ENST00000262919 CCDC47Q96A33 483 aaKnown RBP22.78■■□□□ 1.24
ATRN-201ENST00000262919 AMOTL1Q8IY63 956 aa22.77■■□□□ 1.24
ATRN-201ENST00000262919 ROCK1Q13464 1354 aa22.77■■□□□ 1.23
ATRN-201ENST00000262919 SENP3Q9H4L4 574 aaPredicted RBP22.76■■□□□ 1.23
ATRN-201ENST00000262919 MTERF4Q7Z6M4 381 aaKnown RBP22.76■■□□□ 1.23
ATRN-201ENST00000262919 TCEAL9Q9UHQ7 104 aa22.76■■□□□ 1.23
ATRN-201ENST00000262919 RDXP35241 583 aaKnown RBP22.75■■□□□ 1.23
ATRN-201ENST00000262919 CENPJQ9HC77 1338 aaPredicted RBP22.75■■□□□ 1.23
ATRN-201ENST00000262919 CHMP3Q9Y3E7 222 aa22.74■■□□□ 1.23
ATRN-201ENST00000262919 AK7Q96M32 723 aa22.74■■□□□ 1.23
ATRN-201ENST00000262919 ANKRD30AQ9BXX3 1397 aa22.73■■□□□ 1.23
ATRN-201ENST00000262919 REC8O95072 547 aa22.72■■□□□ 1.23
ATRN-201ENST00000262919 MFAP1P55081 439 aaKnown RBP22.72■■□□□ 1.23
ATRN-201ENST00000262919 FAM184AQ8NB25 1140 aa22.72■■□□□ 1.23
ATRN-201ENST00000262919 WWC1Q8IX03 1113 aa22.72■■□□□ 1.23
ATRN-201ENST00000262919 NGEFQ8N5V2 710 aa22.72■■□□□ 1.23
ATRN-201ENST00000262919 PES1O00541 588 aaKnown RBP22.72■■□□□ 1.23
ATRN-201ENST00000262919 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
ATRN-201ENST00000262919 SYNE3Q6ZMZ3 975 aa22.72■■□□□ 1.23
ATRN-201ENST00000262919 APBB1O00213 710 aa22.71■■□□□ 1.23
ATRN-201ENST00000262919 RUFY2Q8WXA3 655 aa22.71■■□□□ 1.23
ATRN-201ENST00000262919 CCDC18Q5T9S5 1454 aa22.71■■□□□ 1.23
ATRN-201ENST00000262919 CENPQQ7L2Z9 268 aaPredicted RBP22.7■■□□□ 1.22
ATRN-201ENST00000262919 NLRP13Q86W25 1043 aa22.7■■□□□ 1.22
ATRN-201ENST00000262919 ARGLU1Q9NWB6 273 aaPredicted RBP22.7■■□□□ 1.22
ATRN-201ENST00000262919 MYO6Q9UM54 1294 aa22.7■■□□□ 1.22
ATRN-201ENST00000262919 CREBRFQ8IUR6 639 aa22.7■■□□□ 1.22
ATRN-201ENST00000262919 KIF15Q9NS87 1388 aa22.7■■□□□ 1.22
ATRN-201ENST00000262919 DCTN1Q14203 1278 aa22.69■■□□□ 1.22
ATRN-201ENST00000262919 CSB-PGBD3P0DP91 1061 aa22.69■■□□□ 1.22
ATRN-201ENST00000262919 RUFY1Q96T51 708 aa22.69■■□□□ 1.22
ATRN-201ENST00000262919 VPS53Q5VIR6 699 aa22.68■■□□□ 1.22
ATRN-201ENST00000262919 RSPH4AQ5TD94 716 aa22.68■■□□□ 1.22
ATRN-201ENST00000262919 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
ATRN-201ENST00000262919 TRIM29Q14134 588 aa22.66■■□□□ 1.22
ATRN-201ENST00000262919 NOL10Q9BSC4 688 aaKnown RBP22.65■■□□□ 1.22
ATRN-201ENST00000262919 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.65■■□□□ 1.22
ATRN-201ENST00000262919 FRAT2O75474 233 aaPredicted RBP22.65■■□□□ 1.22
ATRN-201ENST00000262919 PAK3O75914 559 aaPredicted RBP22.64■■□□□ 1.22
ATRN-201ENST00000262919 CWC15Q9P013 229 aaKnown RBP22.64■■□□□ 1.22
ATRN-201ENST00000262919 ZKSCAN1P17029 563 aaPredicted RBP22.64■■□□□ 1.21
ATRN-201ENST00000262919 AAMPQ13685 434 aa22.64■■□□□ 1.21
ATRN-201ENST00000262919 ZNF771Q7L3S4 317 aaPredicted RBP22.62■■□□□ 1.21
ATRN-201ENST00000262919 RNF20Q5VTR2 975 aa22.62■■□□□ 1.21
ATRN-201ENST00000262919 CCAR2Q8N163 923 aaKnown RBP22.62■■□□□ 1.21
ATRN-201ENST00000262919 NAT10Q9H0A0 1025 aaKnown RBP22.62■■□□□ 1.21
ATRN-201ENST00000262919 HSP90B2PQ58FF3 399 aa22.62■■□□□ 1.21
ATRN-201ENST00000262919 SIN3AQ96ST3 1273 aa22.62■■□□□ 1.21
ATRN-201ENST00000262919 CCDC173Q0VFZ6 552 aa22.61■■□□□ 1.21
ATRN-201ENST00000262919 DHX8Q14562 1220 aaKnown RBP22.61■■□□□ 1.21
ATRN-201ENST00000262919 MAP7D2Q96T17 732 aa22.61■■□□□ 1.21
ATRN-201ENST00000262919 SOX12O15370 315 aa22.61■■□□□ 1.21
ATRN-201ENST00000262919 EID1Q9Y6B2 187 aa22.6■■□□□ 1.21
ATRN-201ENST00000262919 ARID3AQ99856 593 aa22.6■■□□□ 1.21
ATRN-201ENST00000262919 DDX49Q9Y6V7 483 aaKnown RBP22.6■■□□□ 1.21
ATRN-201ENST00000262919 CARMIL1Q5VZK9 1371 aa22.6■■□□□ 1.21
ATRN-201ENST00000262919 FAM161AQ3B820 660 aa22.6■■□□□ 1.21
ATRN-201ENST00000262919 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.6■■□□□ 1.21
ATRN-201ENST00000262919 KRI1Q8N9T8 703 aaKnown RBP22.59■■□□□ 1.21
ATRN-201ENST00000262919 CCDC191Q8NCU4 936 aa22.59■■□□□ 1.21
ATRN-201ENST00000262919 CGNL1Q0VF96 1302 aa22.59■■□□□ 1.21
ATRN-201ENST00000262919 ZNF330Q9Y3S2 320 aaPredicted RBP22.58■■□□□ 1.21
ATRN-201ENST00000262919 HSPA5P11021 654 aaKnown RBP22.57■■□□□ 1.2
ATRN-201ENST00000262919 TRIM34Q9BYJ4 488 aa22.57■■□□□ 1.2
ATRN-201ENST00000262919 CUX2O14529 1486 aa22.57■■□□□ 1.2
ATRN-201ENST00000262919 GTF2E1P29083 439 aaPredicted RBP22.57■■□□□ 1.2
ATRN-201ENST00000262919 NEXNQ0ZGT2 675 aa22.57■■□□□ 1.2
ATRN-201ENST00000262919 GSE1Q14687 1217 aa22.57■■□□□ 1.2
ATRN-201ENST00000262919 ERCC4Q92889 916 aaPredicted RBP22.56■■□□□ 1.2
ATRN-201ENST00000262919 TOMM22Q9NS69 142 aa22.56■■□□□ 1.2
ATRN-201ENST00000262919 DIAPH3Q9NSV4 1193 aa22.56■■□□□ 1.2
ATRN-201ENST00000262919 MYO15BQ96JP2 1530 aa22.56■■□□□ 1.2
ATRN-201ENST00000262919 NUP155O75694 1391 aa22.55■■□□□ 1.2
ATRN-201ENST00000262919 SENP3-EIF4A1A0A087X0R7 540 aa22.55■■□□□ 1.2
ATRN-201ENST00000262919 PKD2Q13563 968 aa22.55■■□□□ 1.2
ATRN-201ENST00000262919 ZRSR2Q15696 482 aaKnown RBP22.54■■□□□ 1.2
ATRN-201ENST00000262919 HOMER1Q86YM7 354 aa22.53■■□□□ 1.2
ATRN-201ENST00000262919 CCP110O43303 1012 aa22.53■■□□□ 1.2
ATRN-201ENST00000262919 ODF2Q5BJF6 829 aa22.53■■□□□ 1.2
ATRN-201ENST00000262919 TRDNQ13061 729 aa22.53■■□□□ 1.2
ATRN-201ENST00000262919 SLC4A10Q6U841 1118 aa22.52■■□□□ 1.2
ATRN-201ENST00000262919 E9PSI1 815 aa22.52■■□□□ 1.2
ATRN-201ENST00000262919 PDE4CQ08493 712 aa22.52■■□□□ 1.2
ATRN-201ENST00000262919 PCMTD1Q96MG8 357 aaPredicted RBP22.51■■□□□ 1.19
ATRN-201ENST00000262919 AMPHP49418 695 aa22.51■■□□□ 1.19
ATRN-201ENST00000262919 CCDC43Q96MW1 224 aaKnown RBP22.51■■□□□ 1.19
ATRN-201ENST00000262919 MYBBP1AQ9BQG0 1328 aaKnown RBP22.51■■□□□ 1.19
ATRN-201ENST00000262919 CPLX1O14810 134 aa22.5■■□□□ 1.19
ATRN-201ENST00000262919 NUCB2P80303 420 aa22.5■■□□□ 1.19
ATRN-201ENST00000262919 CTDP1Q9Y5B0 961 aaPredicted RBP22.5■■□□□ 1.19
ATRN-201ENST00000262919 STK26Q9P289 416 aa22.49■■□□□ 1.19
ATRN-201ENST00000262919 SAFBQ15424 915 aaKnown RBP eCLIP22.49■■□□□ 1.19
ATRN-201ENST00000262919 CT47A1Q5JQC4 288 aaPredicted RBP22.49■■□□□ 1.19
ATRN-201ENST00000262919 KIF7Q2M1P5 1343 aa22.48■■□□□ 1.19
ATRN-201ENST00000262919 ERICH2A1L162 156 aa22.48■■□□□ 1.19
ATRN-201ENST00000262919 SAFB2Q14151 953 aaKnown RBP eCLIP22.48■■□□□ 1.19
ATRN-201ENST00000262919 MCTP1Q6DN14 999 aa22.47■■□□□ 1.19
ATRN-201ENST00000262919 EFCAB2Q5VUJ9 269 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms