RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 E9PCH4 1651 aa19.67■□□□□ 0.74
XRCC1-201ENST00000262887 SLC4A3P48751 1232 aa19.66■□□□□ 0.74
XRCC1-201ENST00000262887 CAMSAP2Q08AD1 1489 aa19.66■□□□□ 0.74
XRCC1-201ENST00000262887 ADGBQ8N7X0 1667 aa19.66■□□□□ 0.74
XRCC1-201ENST00000262887 MRC2Q9UBG0 1479 aa19.65■□□□□ 0.74
XRCC1-201ENST00000262887 PARD3Q8TEW0 1356 aa19.65■□□□□ 0.74
XRCC1-201ENST00000262887 KDM2AQ9Y2K7 1162 aa19.65■□□□□ 0.74
XRCC1-201ENST00000262887 ARHGEF12Q9NZN5 1544 aa19.65■□□□□ 0.74
XRCC1-201ENST00000262887 CFDP1Q9UEE9 299 aaPredicted RBP19.64■□□□□ 0.73
XRCC1-201ENST00000262887 ADGRL2O95490 1459 aa19.62■□□□□ 0.73
XRCC1-201ENST00000262887 NUP153P49790 1475 aaKnown RBP19.61■□□□□ 0.73
XRCC1-201ENST00000262887 ANKRD30AQ9BXX3 1397 aa19.61■□□□□ 0.73
XRCC1-201ENST00000262887 ZNF777Q9ULD5 760 aaPredicted RBP19.61■□□□□ 0.73
XRCC1-201ENST00000262887 KIAA0586Q9BVV6 1533 aa19.6■□□□□ 0.73
XRCC1-201ENST00000262887 ANKRD50Q9ULJ7 1429 aa19.6■□□□□ 0.73
XRCC1-201ENST00000262887 DCAF11Q8TEB1 546 aa19.6■□□□□ 0.73
XRCC1-201ENST00000262887 TARBP1Q13395 1621 aaKnown RBP19.59■□□□□ 0.73
XRCC1-201ENST00000262887 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
XRCC1-201ENST00000262887 NUP155O75694 1391 aa19.58■□□□□ 0.73
XRCC1-201ENST00000262887 RSPH6AQ9H0K4 717 aa19.58■□□□□ 0.72
XRCC1-201ENST00000262887 KDM2BQ8NHM5 1336 aa19.57■□□□□ 0.72
XRCC1-201ENST00000262887 BLMP54132 1417 aaPredicted RBP19.57■□□□□ 0.72
XRCC1-201ENST00000262887 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
XRCC1-201ENST00000262887 FAM161AQ3B820 660 aa19.57■□□□□ 0.72
XRCC1-201ENST00000262887 FAM43AQ8N2R8 423 aa19.57■□□□□ 0.72
XRCC1-201ENST00000262887 ITSN2Q9NZM3 1697 aa19.57■□□□□ 0.72
XRCC1-201ENST00000262887 C20orf194Q5TEA3 1177 aa19.56■□□□□ 0.72
XRCC1-201ENST00000262887 CROCC2H7BZ55 1655 aa19.56■□□□□ 0.72
XRCC1-201ENST00000262887 PRG4Q92954 1404 aaPredicted RBP19.56■□□□□ 0.72
XRCC1-201ENST00000262887 CENPQQ7L2Z9 268 aaPredicted RBP19.56■□□□□ 0.72
XRCC1-201ENST00000262887 FRAT2O75474 233 aaPredicted RBP19.55■□□□□ 0.72
XRCC1-201ENST00000262887 RAPGEF6Q8TEU7 1601 aa19.55■□□□□ 0.72
XRCC1-201ENST00000262887 TROQ12816 1431 aaPredicted RBP19.55■□□□□ 0.72
XRCC1-201ENST00000262887 INSRP06213 1382 aa19.54■□□□□ 0.72
XRCC1-201ENST00000262887 PER1O15534 1290 aaPredicted RBP19.54■□□□□ 0.72
XRCC1-201ENST00000262887 GPATCH8Q9UKJ3 1502 aaKnown RBP19.54■□□□□ 0.72
XRCC1-201ENST00000262887 CC2D1BQ5T0F9 858 aaKnown RBP19.54■□□□□ 0.72
XRCC1-201ENST00000262887 PLEKHH2Q8IVE3 1493 aa19.54■□□□□ 0.72
XRCC1-201ENST00000262887 KIAA0556O60303 1618 aa19.53■□□□□ 0.72
XRCC1-201ENST00000262887 C8orf34Q49A92 452 aa19.53■□□□□ 0.72
XRCC1-201ENST00000262887 ZMYM4Q5VZL5 1548 aa19.53■□□□□ 0.72
XRCC1-201ENST00000262887 DISP1Q96F81 1524 aa19.51■□□□□ 0.71
XRCC1-201ENST00000262887 CEP170Q5SW79 1584 aa19.5■□□□□ 0.71
XRCC1-201ENST00000262887 GLIPR1L2Q4G1C9 344 aa19.48■□□□□ 0.71
XRCC1-201ENST00000262887 KDM5DQ9BY66 1539 aa19.46■□□□□ 0.71
XRCC1-201ENST00000262887 RGS3P49796 1198 aa19.45■□□□□ 0.7
XRCC1-201ENST00000262887 COL17A1Q9UMD9 1497 aaPredicted RBP19.44■□□□□ 0.7
XRCC1-201ENST00000262887 C9orf84Q5VXU9 1444 aa19.44■□□□□ 0.7
XRCC1-201ENST00000262887 PRAG1Q86YV5 1406 aa19.44■□□□□ 0.7
XRCC1-201ENST00000262887 PANK3Q9H999 370 aa19.44■□□□□ 0.7
XRCC1-201ENST00000262887 TRPM1Q7Z4N2 1603 aa19.44■□□□□ 0.7
XRCC1-201ENST00000262887 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.43■□□□□ 0.7
XRCC1-201ENST00000262887 ADAMTS8Q9UP79 889 aa19.43■□□□□ 0.7
XRCC1-201ENST00000262887 NBPF1Q3BBV0 1214 aa19.42■□□□□ 0.7
XRCC1-201ENST00000262887 EIF4G3O43432 1585 aaKnown RBP19.42■□□□□ 0.7
XRCC1-201ENST00000262887 DISP3Q9P2K9 1392 aa19.42■□□□□ 0.7
XRCC1-201ENST00000262887 ADCY10Q96PN6 1610 aa19.42■□□□□ 0.7
XRCC1-201ENST00000262887 DUSP27Q5VZP5 1158 aa19.42■□□□□ 0.7
XRCC1-201ENST00000262887 SHANK2Q9UPX8 1470 aa19.41■□□□□ 0.7
XRCC1-201ENST00000262887 PTPRGP23470 1445 aa19.4■□□□□ 0.7
XRCC1-201ENST00000262887 TSPY4P0CV99 314 aa19.39■□□□□ 0.7
XRCC1-201ENST00000262887 TSPY10P0CW01 314 aa19.39■□□□□ 0.7
XRCC1-201ENST00000262887 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.7
XRCC1-201ENST00000262887 PLEKHH1Q9ULM0 1364 aa19.39■□□□□ 0.69
XRCC1-201ENST00000262887 ZMYND15Q9H091 742 aa19.39■□□□□ 0.69
XRCC1-201ENST00000262887 RGL3Q3MIN7 710 aa19.38■□□□□ 0.69
XRCC1-201ENST00000262887 TESK2Q96S53 571 aa19.38■□□□□ 0.69
XRCC1-201ENST00000262887 WDR43Q15061 677 aaKnown RBP eCLIP19.38■□□□□ 0.69
XRCC1-201ENST00000262887 CCDC144AA2RUR9 1427 aa19.38■□□□□ 0.69
XRCC1-201ENST00000262887 GPRASP1Q5JY77 1395 aa19.37■□□□□ 0.69
XRCC1-201ENST00000262887 CDC42BPAQ5VT25 1732 aa19.37■□□□□ 0.69
XRCC1-201ENST00000262887 GOLGA2Q08379 1002 aa19.37■□□□□ 0.69
XRCC1-201ENST00000262887 PLB1Q6P1J6 1458 aa19.37■□□□□ 0.69
XRCC1-201ENST00000262887 ERBINQ96RT1 1412 aa19.36■□□□□ 0.69
XRCC1-201ENST00000262887 POGKQ9P215 609 aa19.36■□□□□ 0.69
XRCC1-201ENST00000262887 IFT140Q96RY7 1462 aa19.35■□□□□ 0.69
XRCC1-201ENST00000262887 TMF1P82094 1093 aa19.35■□□□□ 0.69
XRCC1-201ENST00000262887 VIRMAQ69YN4 1812 aaKnown RBP19.35■□□□□ 0.69
XRCC1-201ENST00000262887 VSIG10Q8N0Z9 540 aa19.34■□□□□ 0.69
XRCC1-201ENST00000262887 PRDM15P57071 1507 aaPredicted RBP19.34■□□□□ 0.69
XRCC1-201ENST00000262887 ZNF521Q96K83 1311 aa19.33■□□□□ 0.69
XRCC1-201ENST00000262887 L1TD1Q5T7N2 865 aaKnown RBP19.33■□□□□ 0.69
XRCC1-201ENST00000262887 FAM135AQ9P2D6 1515 aa19.33■□□□□ 0.68
XRCC1-201ENST00000262887 PODXL2Q9NZ53 605 aa19.33■□□□□ 0.68
XRCC1-201ENST00000262887 RRAGDQ9NQL2 400 aaPredicted RBP19.32■□□□□ 0.68
XRCC1-201ENST00000262887 LAMC1P11047 1609 aa19.31■□□□□ 0.68
XRCC1-201ENST00000262887 USP19O94966 1318 aa19.3■□□□□ 0.68
XRCC1-201ENST00000262887 BECN1Q14457 450 aa19.3■□□□□ 0.68
XRCC1-201ENST00000262887 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
XRCC1-201ENST00000262887 A2MP01023 1474 aa19.3■□□□□ 0.68
XRCC1-201ENST00000262887 PPP2R1AP30153 589 aa19.3■□□□□ 0.68
XRCC1-201ENST00000262887 PLEKHG5O94827 1062 aa19.29■□□□□ 0.68
XRCC1-201ENST00000262887 SLFN5Q08AF3 891 aa19.29■□□□□ 0.68
XRCC1-201ENST00000262887 KNSTRNQ9Y448 316 aa19.28■□□□□ 0.68
XRCC1-201ENST00000262887 PLEKHD1A6NEE1 506 aa19.28■□□□□ 0.68
XRCC1-201ENST00000262887 HNRNPMP52272 730 aaKnown RBP eCLIP19.28■□□□□ 0.68
XRCC1-201ENST00000262887 GRIN2AQ12879 1464 aa19.26■□□□□ 0.67
XRCC1-201ENST00000262887 SLKQ9H2G2 1235 aaPredicted RBP19.26■□□□□ 0.67
XRCC1-201ENST00000262887 ABCC10Q5T3U5 1492 aa19.25■□□□□ 0.67
XRCC1-201ENST00000262887 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms