RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 XRCC6P12956 609 aaKnown RBP eCLIP20.3■□□□□ 0.84
PRPF40B-201ENST00000261897 FYCO1Q9BQS8 1478 aa20.29■□□□□ 0.84
PRPF40B-201ENST00000261897 FAM13BQ9NYF5 915 aa20.28■□□□□ 0.84
PRPF40B-201ENST00000261897 IGHDP01880 384 aa20.28■□□□□ 0.84
PRPF40B-201ENST00000261897 TRAK2O60296 914 aa20.28■□□□□ 0.84
PRPF40B-201ENST00000261897 HSP90AB1P08238 724 aaKnown RBP20.27■□□□□ 0.84
PRPF40B-201ENST00000261897 HSCBQ8IWL3 235 aa20.26■□□□□ 0.83
PRPF40B-201ENST00000261897 TMF1P82094 1093 aa20.25■□□□□ 0.83
PRPF40B-201ENST00000261897 FTSJ3Q8IY81 847 aaKnown RBP20.25■□□□□ 0.83
PRPF40B-201ENST00000261897 AMER1Q5JTC6 1135 aaPredicted RBP20.25■□□□□ 0.83
PRPF40B-201ENST00000261897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.23■□□□□ 0.83
PRPF40B-201ENST00000261897 TBC1D2Q9BYX2 928 aa20.21■□□□□ 0.83
PRPF40B-201ENST00000261897 MSNP26038 577 aaKnown RBP20.2■□□□□ 0.82
PRPF40B-201ENST00000261897 MCM4P33991 863 aa20.2■□□□□ 0.82
PRPF40B-201ENST00000261897 ESPNB1AK53 854 aa20.2■□□□□ 0.82
PRPF40B-201ENST00000261897 CENPJQ9HC77 1338 aaPredicted RBP20.2■□□□□ 0.82
PRPF40B-201ENST00000261897 DUSP27Q5VZP5 1158 aa20.17■□□□□ 0.82
PRPF40B-201ENST00000261897 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
PRPF40B-201ENST00000261897 RPRD2Q5VT52 1461 aaKnown RBP20.17■□□□□ 0.82
PRPF40B-201ENST00000261897 HNRNPMP52272 730 aaKnown RBP eCLIP20.16■□□□□ 0.82
PRPF40B-201ENST00000261897 DNTTIP2Q5QJE6 756 aaKnown RBP20.16■□□□□ 0.82
PRPF40B-201ENST00000261897 PODXL2Q9NZ53 605 aa20.16■□□□□ 0.82
PRPF40B-201ENST00000261897 FOXD4L5Q5VV16 416 aaPredicted RBP20.15■□□□□ 0.82
PRPF40B-201ENST00000261897 FOXD4L4Q8WXT5 416 aaPredicted RBP20.15■□□□□ 0.82
PRPF40B-201ENST00000261897 GRPEL1Q9HAV7 217 aa20.15■□□□□ 0.82
PRPF40B-201ENST00000261897 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
PRPF40B-201ENST00000261897 PDZRN3Q9UPQ7 1066 aa20.15■□□□□ 0.82
PRPF40B-201ENST00000261897 SPINK5Q9NQ38 1064 aaPredicted RBP20.14■□□□□ 0.82
PRPF40B-201ENST00000261897 BIVM-ERCC5R4GMW8 1640 aa20.14■□□□□ 0.82
PRPF40B-201ENST00000261897 RRP9O43818 475 aaKnown RBP20.14■□□□□ 0.81
PRPF40B-201ENST00000261897 TNNQ9UQP3 1299 aa20.14■□□□□ 0.81
PRPF40B-201ENST00000261897 KIAA1211Q6ZU35 1233 aa20.13■□□□□ 0.81
PRPF40B-201ENST00000261897 MPNDQ8N594 471 aa20.13■□□□□ 0.81
PRPF40B-201ENST00000261897 CHMP5Q9NZZ3 219 aa20.13■□□□□ 0.81
PRPF40B-201ENST00000261897 R3HCC1Q9Y3T6 440 aaKnown RBP20.13■□□□□ 0.81
PRPF40B-201ENST00000261897 MRE11P49959 708 aa20.13■□□□□ 0.81
PRPF40B-201ENST00000261897 C22orf23Q9BZE7 217 aa20.13■□□□□ 0.81
PRPF40B-201ENST00000261897 MAPK8IP3Q9UPT6 1336 aa20.12■□□□□ 0.81
PRPF40B-201ENST00000261897 KDM2BQ8NHM5 1336 aa20.12■□□□□ 0.81
PRPF40B-201ENST00000261897 CADPSQ9ULU8 1353 aa20.11■□□□□ 0.81
PRPF40B-201ENST00000261897 PPP2R1AP30153 589 aa20.11■□□□□ 0.81
PRPF40B-201ENST00000261897 KDM5BQ9UGL1 1544 aa20.11■□□□□ 0.81
PRPF40B-201ENST00000261897 MIA2Q96PC5 1412 aa20.11■□□□□ 0.81
PRPF40B-201ENST00000261897 PTMAP06454 111 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-201ENST00000261897 ITPRIPQ8IWB1 547 aa20.1■□□□□ 0.81
PRPF40B-201ENST00000261897 KDM6BO15054 1643 aa20.1■□□□□ 0.81
PRPF40B-201ENST00000261897 PRDM10Q9NQV6 1147 aa20.1■□□□□ 0.81
PRPF40B-201ENST00000261897 SPATA31E1Q6ZUB1 1445 aa20.1■□□□□ 0.81
PRPF40B-201ENST00000261897 GOLGA6L22H0YM25 854 aa20.09■□□□□ 0.81
PRPF40B-201ENST00000261897 LRPPRCP42704 1394 aaKnown RBP20.09■□□□□ 0.81
PRPF40B-201ENST00000261897 PLEKHG5O94827 1062 aa20.08■□□□□ 0.81
PRPF40B-201ENST00000261897 CDK13Q14004 1512 aaKnown RBP20.08■□□□□ 0.81
PRPF40B-201ENST00000261897 NCAPD3P42695 1498 aa20.08■□□□□ 0.81
PRPF40B-201ENST00000261897 RWDD1Q9H446 243 aaPredicted RBP20.08■□□□□ 0.81
PRPF40B-201ENST00000261897 DDX49Q9Y6V7 483 aaKnown RBP20.08■□□□□ 0.81
PRPF40B-201ENST00000261897 PLCB2Q00722 1185 aa20.07■□□□□ 0.8
PRPF40B-201ENST00000261897 PLEKHH1Q9ULM0 1364 aa20.07■□□□□ 0.8
PRPF40B-201ENST00000261897 CLCN1P35523 988 aa20.07■□□□□ 0.8
PRPF40B-201ENST00000261897 BICRAQ9NZM4 1560 aa20.07■□□□□ 0.8
PRPF40B-201ENST00000261897 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
PRPF40B-201ENST00000261897 CGNL1Q0VF96 1302 aa20.07■□□□□ 0.8
PRPF40B-201ENST00000261897 FOXD4L6Q3SYB3 417 aaPredicted RBP20.07■□□□□ 0.8
PRPF40B-201ENST00000261897 FOXD4L3Q6VB84 417 aaPredicted RBP20.07■□□□□ 0.8
PRPF40B-201ENST00000261897 APBB1O00213 710 aa20.05■□□□□ 0.8
PRPF40B-201ENST00000261897 PMFBP1Q8TBY8 1022 aa20.05■□□□□ 0.8
PRPF40B-201ENST00000261897 GBP4Q96PP9 640 aa20.05■□□□□ 0.8
PRPF40B-201ENST00000261897 SLFN5Q08AF3 891 aa20.04■□□□□ 0.8
PRPF40B-201ENST00000261897 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
PRPF40B-201ENST00000261897 PLEKHD1A6NEE1 506 aa20.04■□□□□ 0.8
PRPF40B-201ENST00000261897 DDX11L8A8MPP1 907 aa20.03■□□□□ 0.8
PRPF40B-201ENST00000261897 E9PSI1 815 aa20.03■□□□□ 0.8
PRPF40B-201ENST00000261897 U2SURPO15042 1029 aaKnown RBP20.03■□□□□ 0.8
PRPF40B-201ENST00000261897 LNPKQ9C0E8 428 aa20.03■□□□□ 0.8
PRPF40B-201ENST00000261897 ANKRD30AQ9BXX3 1397 aa20.03■□□□□ 0.8
PRPF40B-201ENST00000261897 DENND4BO75064 1496 aaPredicted RBP20.03■□□□□ 0.8
PRPF40B-201ENST00000261897 DAPK1P53355 1430 aa20.01■□□□□ 0.79
PRPF40B-201ENST00000261897 PCDHB15Q9Y5E8 787 aa20.01■□□□□ 0.79
PRPF40B-201ENST00000261897 NASPP49321 788 aaPredicted RBP20.01■□□□□ 0.79
PRPF40B-201ENST00000261897 KIAA1107Q9UPP5 1409 aa20.01■□□□□ 0.79
PRPF40B-201ENST00000261897 SMC4Q9NTJ3 1288 aa20■□□□□ 0.79
PRPF40B-201ENST00000261897 TEX14Q8IWB6 1497 aa20■□□□□ 0.79
PRPF40B-201ENST00000261897 ZHX1Q9UKY1 873 aaPredicted RBP19.99■□□□□ 0.79
PRPF40B-201ENST00000261897 PER1O15534 1290 aaPredicted RBP19.98■□□□□ 0.79
PRPF40B-201ENST00000261897 RNF214Q8ND24 703 aa19.98■□□□□ 0.79
PRPF40B-201ENST00000261897 CFAP43Q8NDM7 1665 aa19.98■□□□□ 0.79
PRPF40B-201ENST00000261897 DISP3Q9P2K9 1392 aa19.98■□□□□ 0.79
PRPF40B-201ENST00000261897 U2AF1L5P0DN76 240 aaPredicted RBP19.97■□□□□ 0.79
PRPF40B-201ENST00000261897 U2AF1Q01081 240 aaKnown RBP eCLIP19.97■□□□□ 0.79
PRPF40B-201ENST00000261897 SUPT6HQ7KZ85 1726 aaKnown RBP19.97■□□□□ 0.79
PRPF40B-201ENST00000261897 ABCC5O15440 1437 aa19.97■□□□□ 0.79
PRPF40B-201ENST00000261897 TBC1D32Q96NH3 1257 aa19.97■□□□□ 0.79
PRPF40B-201ENST00000261897 NOL8Q76FK4 1167 aaKnown RBP19.97■□□□□ 0.79
PRPF40B-201ENST00000261897 MORC1Q86VD1 984 aa19.97■□□□□ 0.79
PRPF40B-201ENST00000261897 XPCQ01831 940 aaPredicted RBP19.96■□□□□ 0.79
PRPF40B-201ENST00000261897 BCL11BQ9C0K0 894 aaPredicted RBP19.96■□□□□ 0.79
PRPF40B-201ENST00000261897 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
PRPF40B-201ENST00000261897 ERBB4Q15303 1308 aa19.96■□□□□ 0.79
PRPF40B-201ENST00000261897 ANKRD50Q9ULJ7 1429 aa19.96■□□□□ 0.79
PRPF40B-201ENST00000261897 RLBP1P12271 317 aa19.95■□□□□ 0.78
PRPF40B-201ENST00000261897 SAFB2Q14151 953 aaKnown RBP eCLIP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms