RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 CDCA8Q53HL2 280 aa19.3■□□□□ 0.68
CAB39-201ENST00000258418 GRIN2AQ12879 1464 aa19.29■□□□□ 0.68
CAB39-201ENST00000258418 CAMSAP2Q08AD1 1489 aa19.28■□□□□ 0.68
CAB39-201ENST00000258418 CFAP43Q8NDM7 1665 aa19.28■□□□□ 0.68
CAB39-201ENST00000258418 DEKP35659 375 aaKnown RBP19.27■□□□□ 0.68
CAB39-201ENST00000258418 RRP1P56182 461 aaKnown RBP19.27■□□□□ 0.67
CAB39-201ENST00000258418 NUP153P49790 1475 aaKnown RBP19.26■□□□□ 0.67
CAB39-201ENST00000258418 RSPH4AQ5TD94 716 aa19.26■□□□□ 0.67
CAB39-201ENST00000258418 CRBNQ96SW2 442 aa19.26■□□□□ 0.67
CAB39-201ENST00000258418 CTTNBP2Q8WZ74 1663 aa19.26■□□□□ 0.67
CAB39-201ENST00000258418 MORC1Q86VD1 984 aa19.26■□□□□ 0.67
CAB39-201ENST00000258418 BCL2L13Q9BXK5 485 aa19.26■□□□□ 0.67
CAB39-201ENST00000258418 ADAMTS8Q9UP79 889 aa19.25■□□□□ 0.67
CAB39-201ENST00000258418 SLC4A3P48751 1232 aa19.25■□□□□ 0.67
CAB39-201ENST00000258418 CFAP70Q5T0N1 1121 aa19.24■□□□□ 0.67
CAB39-201ENST00000258418 CLUAP1Q96AJ1 413 aa19.24■□□□□ 0.67
CAB39-201ENST00000258418 KIF21AQ7Z4S6 1674 aa19.24■□□□□ 0.67
CAB39-201ENST00000258418 APAF1O14727 1248 aa19.24■□□□□ 0.67
CAB39-201ENST00000258418 TMEM132EQ6IEE7 984 aa19.23■□□□□ 0.67
CAB39-201ENST00000258418 RPRD2Q5VT52 1461 aaKnown RBP19.23■□□□□ 0.67
CAB39-201ENST00000258418 NEFMP07197 916 aa19.23■□□□□ 0.67
CAB39-201ENST00000258418 ERICH6BQ5W0A0 696 aa19.23■□□□□ 0.67
CAB39-201ENST00000258418 SRPK2P78362 688 aaKnown RBP19.23■□□□□ 0.67
CAB39-201ENST00000258418 ROCK1Q13464 1354 aa19.22■□□□□ 0.67
CAB39-201ENST00000258418 ESF1Q9H501 851 aaKnown RBP19.22■□□□□ 0.67
CAB39-201ENST00000258418 KANK1Q14678 1352 aa19.21■□□□□ 0.67
CAB39-201ENST00000258418 GPATCH8Q9UKJ3 1502 aaKnown RBP19.21■□□□□ 0.67
CAB39-201ENST00000258418 POGKQ9P215 609 aa19.21■□□□□ 0.67
CAB39-201ENST00000258418 ARHGAP5Q13017 1502 aa19.2■□□□□ 0.66
CAB39-201ENST00000258418 SOX12O15370 315 aa19.2■□□□□ 0.66
CAB39-201ENST00000258418 KDM6BO15054 1643 aa19.2■□□□□ 0.66
CAB39-201ENST00000258418 PAK3O75914 559 aaPredicted RBP19.19■□□□□ 0.66
CAB39-201ENST00000258418 SYNJ2O15056 1496 aa19.18■□□□□ 0.66
CAB39-201ENST00000258418 GOLGA2Q08379 1002 aa19.17■□□□□ 0.66
CAB39-201ENST00000258418 U2AF1L5P0DN76 240 aaPredicted RBP19.17■□□□□ 0.66
CAB39-201ENST00000258418 U2AF1Q01081 240 aaKnown RBP eCLIP19.17■□□□□ 0.66
CAB39-201ENST00000258418 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
CAB39-201ENST00000258418 WASHC2CQ9Y4E1 1318 aa19.15■□□□□ 0.66
CAB39-201ENST00000258418 CFAP53Q96M91 514 aa19.14■□□□□ 0.65
CAB39-201ENST00000258418 PDE4AP27815 886 aa19.13■□□□□ 0.65
CAB39-201ENST00000258418 SPRYD3Q8NCJ5 442 aa19.12■□□□□ 0.65
CAB39-201ENST00000258418 IPO9Q96P70 1041 aaKnown RBP19.11■□□□□ 0.65
CAB39-201ENST00000258418 WDR62O43379 1518 aa19.1■□□□□ 0.65
CAB39-201ENST00000258418 DISP1Q96F81 1524 aa19.1■□□□□ 0.65
CAB39-201ENST00000258418 ATP10BO94823 1461 aa19.1■□□□□ 0.65
CAB39-201ENST00000258418 NUTM2FA1L443 756 aa19.1■□□□□ 0.65
CAB39-201ENST00000258418 FTSJ3Q8IY81 847 aaKnown RBP19.1■□□□□ 0.65
CAB39-201ENST00000258418 ABCA5Q8WWZ7 1642 aa19.1■□□□□ 0.65
CAB39-201ENST00000258418 FANCIQ9NVI1 1328 aa19.08■□□□□ 0.65
CAB39-201ENST00000258418 C20orf194Q5TEA3 1177 aa19.08■□□□□ 0.64
CAB39-201ENST00000258418 COG6Q9Y2V7 657 aa19.08■□□□□ 0.64
CAB39-201ENST00000258418 PPP2R1AP30153 589 aa19.08■□□□□ 0.64
CAB39-201ENST00000258418 PLEKHH2Q8IVE3 1493 aa19.07■□□□□ 0.64
CAB39-201ENST00000258418 SCAPERQ9BY12 1400 aa19.07■□□□□ 0.64
CAB39-201ENST00000258418 ADAMTS12P58397 1594 aa19.07■□□□□ 0.64
CAB39-201ENST00000258418 ARID4BQ4LE39 1312 aaPredicted RBP19.07■□□□□ 0.64
CAB39-201ENST00000258418 PDE3BQ13370 1112 aa19.07■□□□□ 0.64
CAB39-201ENST00000258418 SLC12A5Q9H2X9 1139 aa19.07■□□□□ 0.64
CAB39-201ENST00000258418 BRD4O60885 1362 aaPredicted RBP19.06■□□□□ 0.64
CAB39-201ENST00000258418 TCOF1Q13428 1488 aaKnown RBP19.06■□□□□ 0.64
CAB39-201ENST00000258418 TCERG1O14776 1098 aaKnown RBP19.06■□□□□ 0.64
CAB39-201ENST00000258418 SAMD9Q5K651 1589 aa19.06■□□□□ 0.64
CAB39-201ENST00000258418 CYB5RLQ6IPT4 315 aa19.05■□□□□ 0.64
CAB39-201ENST00000258418 UPF2Q9HAU5 1272 aaKnown RBP19.05■□□□□ 0.64
CAB39-201ENST00000258418 MAPK8IP3Q9UPT6 1336 aa19.05■□□□□ 0.64
CAB39-201ENST00000258418 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.05■□□□□ 0.64
CAB39-201ENST00000258418 RAPGEF6Q8TEU7 1601 aa19.05■□□□□ 0.64
CAB39-201ENST00000258418 MINK1Q8N4C8 1332 aaPredicted RBP19.04■□□□□ 0.64
CAB39-201ENST00000258418 PZPP20742 1482 aa19.04■□□□□ 0.64
CAB39-201ENST00000258418 DISP3Q9P2K9 1392 aa19.03■□□□□ 0.64
CAB39-201ENST00000258418 BCAR3O75815 825 aa19.02■□□□□ 0.64
CAB39-201ENST00000258418 ZBTB7CA1YPR0 619 aa19.02■□□□□ 0.64
CAB39-201ENST00000258418 KIAA0556O60303 1618 aa19.02■□□□□ 0.64
CAB39-201ENST00000258418 RAPGEF3O95398 923 aa19.01■□□□□ 0.63
CAB39-201ENST00000258418 CABP2Q9NPB3 220 aa19.01■□□□□ 0.63
CAB39-201ENST00000258418 ELL2O00472 640 aaPredicted RBP19.01■□□□□ 0.63
CAB39-201ENST00000258418 PANK1Q8TE04 598 aa19■□□□□ 0.63
CAB39-201ENST00000258418 SLKQ9H2G2 1235 aaPredicted RBP19■□□□□ 0.63
CAB39-201ENST00000258418 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
CAB39-201ENST00000258418 CCDC141Q6ZP82 1450 aa18.99■□□□□ 0.63
CAB39-201ENST00000258418 HSP90AA1P07900 732 aaKnown RBP18.99■□□□□ 0.63
CAB39-201ENST00000258418 EIF5BO60841 1220 aaKnown RBP18.98■□□□□ 0.63
CAB39-201ENST00000258418 C14orf37Q86TY3 774 aa18.98■□□□□ 0.63
CAB39-201ENST00000258418 GGNBP2Q9H3C7 697 aa18.98■□□□□ 0.63
CAB39-201ENST00000258418 TARBP1Q13395 1621 aaKnown RBP18.98■□□□□ 0.63
CAB39-201ENST00000258418 DHX29Q7Z478 1369 aaKnown RBP18.98■□□□□ 0.63
CAB39-201ENST00000258418 ERBINQ96RT1 1412 aa18.97■□□□□ 0.63
CAB39-201ENST00000258418 CENPJQ9HC77 1338 aaPredicted RBP18.97■□□□□ 0.63
CAB39-201ENST00000258418 KIF14Q15058 1648 aa18.97■□□□□ 0.63
CAB39-201ENST00000258418 TEX14Q8IWB6 1497 aa18.97■□□□□ 0.63
CAB39-201ENST00000258418 DDRGK1Q96HY6 314 aa18.97■□□□□ 0.63
CAB39-201ENST00000258418 EIF3AQ14152 1382 aaKnown RBP18.95■□□□□ 0.62
CAB39-201ENST00000258418 ADGRF5Q8IZF2 1346 aa18.95■□□□□ 0.62
CAB39-201ENST00000258418 DENND4BO75064 1496 aaPredicted RBP18.95■□□□□ 0.62
CAB39-201ENST00000258418 MTHFSP49914 203 aa18.95■□□□□ 0.62
CAB39-201ENST00000258418 EIF4G3O43432 1585 aaKnown RBP18.94■□□□□ 0.62
CAB39-201ENST00000258418 APBB1O00213 710 aa18.93■□□□□ 0.62
CAB39-201ENST00000258418 PBRM1Q86U86 1689 aa18.93■□□□□ 0.62
CAB39-201ENST00000258418 ITPRIPQ8IWB1 547 aa18.93■□□□□ 0.62
CAB39-201ENST00000258418 SMC4Q9NTJ3 1288 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms