RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
CAB39-201ENST00000258418 DCAF8L2P0C7V8 631 aa26.27■■□□□ 1.8
CAB39-201ENST00000258418 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.75
CAB39-201ENST00000258418 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
CAB39-201ENST00000258418 EHMT2Q96KQ7 1210 aa24.61■■□□□ 1.53
CAB39-201ENST00000258418 FAM9AQ8IZU1 332 aaPredicted RBP24.18■■□□□ 1.46
CAB39-201ENST00000258418 PCGF6Q9BYE7 350 aa24.18■■□□□ 1.46
CAB39-201ENST00000258418 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
CAB39-201ENST00000258418 LOC105371045A0A1W2PR82 267 aa23.91■■□□□ 1.42
CAB39-201ENST00000258418 TTBK1Q5TCY1 1321 aaPredicted RBP23.69■■□□□ 1.38
CAB39-201ENST00000258418 TRIM41Q8WV44 630 aa23.64■■□□□ 1.38
CAB39-201ENST00000258418 PPARGC1BQ86YN6 1023 aaKnown RBP23.58■■□□□ 1.37
CAB39-201ENST00000258418 ZCCHC6Q5VYS8 1495 aaKnown RBP23.51■■□□□ 1.35
CAB39-201ENST00000258418 HRCP23327 699 aa23.34■■□□□ 1.33
CAB39-201ENST00000258418 ABCC9O60706 1549 aa23.31■■□□□ 1.32
CAB39-201ENST00000258418 MYO15BQ96JP2 1530 aa23.26■■□□□ 1.31
CAB39-201ENST00000258418 RANGAP1P46060 587 aaPredicted RBP23.24■■□□□ 1.31
CAB39-201ENST00000258418 TRIM26Q12899 539 aaPredicted RBP23.05■■□□□ 1.28
CAB39-201ENST00000258418 CCDC180Q9P1Z9 1646 aa23.02■■□□□ 1.28
CAB39-201ENST00000258418 PABPN1Q86U42 306 aaKnown RBP eCLIP22.94■■□□□ 1.26
CAB39-201ENST00000258418 UBTFP17480 764 aaKnown RBP22.93■■□□□ 1.26
CAB39-201ENST00000258418 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
CAB39-201ENST00000258418 CCER1Q8TC90 406 aaPredicted RBP22.87■■□□□ 1.25
CAB39-201ENST00000258418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
CAB39-201ENST00000258418 APLP2Q06481 763 aa22.65■■□□□ 1.22
CAB39-201ENST00000258418 ZEB1P37275 1124 aaPredicted RBP22.58■■□□□ 1.21
CAB39-201ENST00000258418 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
CAB39-201ENST00000258418 HNRNPUL2Q1KMD3 747 aaKnown RBP22.47■■□□□ 1.19
CAB39-201ENST00000258418 CECR2Q9BXF3 1484 aa22.4■■□□□ 1.18
CAB39-201ENST00000258418 YTHDC1Q96MU7 727 aaKnown RBP22.38■■□□□ 1.17
CAB39-201ENST00000258418 ATP1B4Q9UN42 357 aaPredicted RBP22.36■■□□□ 1.17
CAB39-201ENST00000258418 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
CAB39-201ENST00000258418 ITGAEP38570 1179 aa22.27■■□□□ 1.16
CAB39-201ENST00000258418 RB1CC1Q8TDY2 1594 aa22.2■■□□□ 1.14
CAB39-201ENST00000258418 CSRNP3Q8WYN3 585 aa22.13■■□□□ 1.13
CAB39-201ENST00000258418 MROH2BQ7Z745 1585 aa22.08■■□□□ 1.12
CAB39-201ENST00000258418 DIEXFQ68CQ4 756 aaKnown RBP22.02■■□□□ 1.12
CAB39-201ENST00000258418 CENPBP07199 599 aaPredicted RBP21.99■■□□□ 1.11
CAB39-201ENST00000258418 NACADO15069 1562 aa21.88■■□□□ 1.09
CAB39-201ENST00000258418 WIZO95785 1651 aa21.85■■□□□ 1.09
CAB39-201ENST00000258418 ABCC8Q09428 1581 aa21.81■■□□□ 1.08
CAB39-201ENST00000258418 SOGA1O94964 1423 aa21.81■■□□□ 1.08
CAB39-201ENST00000258418 P3H3Q8IVL6 736 aa21.79■■□□□ 1.08
CAB39-201ENST00000258418 SCAF1Q9H7N4 1312 aaKnown RBP21.77■■□□□ 1.08
CAB39-201ENST00000258418 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
CAB39-201ENST00000258418 CEP162Q5TB80 1403 aa21.71■■□□□ 1.07
CAB39-201ENST00000258418 GTF3C3Q9Y5Q9 886 aa21.7■■□□□ 1.06
CAB39-201ENST00000258418 FAM50AQ14320 339 aaKnown RBP21.64■■□□□ 1.06
CAB39-201ENST00000258418 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.05
CAB39-201ENST00000258418 NEUROD1Q13562 356 aa21.62■■□□□ 1.05
CAB39-201ENST00000258418 ZNF316A6NFI3 1004 aaPredicted RBP21.61■■□□□ 1.05
CAB39-201ENST00000258418 WRNQ14191 1432 aaPredicted RBP eCLIP21.57■■□□□ 1.04
CAB39-201ENST00000258418 RUSC2Q8N2Y8 1516 aa21.56■■□□□ 1.04
CAB39-201ENST00000258418 ACIN1Q9UKV3 1341 aaKnown RBP21.53■■□□□ 1.04
CAB39-201ENST00000258418 ARID3CA6NKF2 412 aa21.52■■□□□ 1.04
CAB39-201ENST00000258418 CLIP1P30622 1438 aa21.5■■□□□ 1.03
CAB39-201ENST00000258418 PELP1Q8IZL8 1130 aaKnown RBP21.5■■□□□ 1.03
CAB39-201ENST00000258418 CNGB1Q14028 1251 aaPredicted RBP21.48■■□□□ 1.03
CAB39-201ENST00000258418 TNIKQ9UKE5 1360 aa21.44■■□□□ 1.02
CAB39-201ENST00000258418 MIER1Q8N108 512 aa21.4■■□□□ 1.02
CAB39-201ENST00000258418 BAZ1BQ9UIG0 1483 aaKnown RBP21.4■■□□□ 1.02
CAB39-201ENST00000258418 GOLGA3Q08378 1498 aa21.39■■□□□ 1.01
CAB39-201ENST00000258418 HIRIP3Q9BW71 556 aaPredicted RBP21.3■■□□□ 1
CAB39-201ENST00000258418 TOP2AP11388 1531 aaKnown RBP21.29■■□□□ 1
CAB39-201ENST00000258418 SMARCA4P51532 1647 aa21.26■□□□□ 0.99
CAB39-201ENST00000258418 BCANQ96GW7 911 aa21.25■□□□□ 0.99
CAB39-201ENST00000258418 KANK4Q5T7N3 995 aaPredicted RBP21.25■□□□□ 0.99
CAB39-201ENST00000258418 POLR3GLQ9BT43 218 aa21.25■□□□□ 0.99
CAB39-201ENST00000258418 EEA1Q15075 1411 aa21.24■□□□□ 0.99
CAB39-201ENST00000258418 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
CAB39-201ENST00000258418 TRIM52Q96A61 297 aa21.17■□□□□ 0.98
CAB39-201ENST00000258418 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
CAB39-201ENST00000258418 RAPGEF2Q9Y4G8 1499 aa21.13■□□□□ 0.97
CAB39-201ENST00000258418 DDX10Q13206 875 aaKnown RBP21.11■□□□□ 0.97
CAB39-201ENST00000258418 FBLN2P98095 1184 aa21.09■□□□□ 0.97
CAB39-201ENST00000258418 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.96
CAB39-201ENST00000258418 CHIC2Q9UKJ5 165 aa21.07■□□□□ 0.96
CAB39-201ENST00000258418 NEFLP07196 543 aa21.04■□□□□ 0.96
CAB39-201ENST00000258418 SIN3AQ96ST3 1273 aa21.04■□□□□ 0.96
CAB39-201ENST00000258418 VPS8Q8N3P4 1428 aa21.02■□□□□ 0.96
CAB39-201ENST00000258418 KIF27Q86VH2 1401 aa21■□□□□ 0.95
CAB39-201ENST00000258418 ZNF326Q5BKZ1 582 aaKnown RBP20.97■□□□□ 0.95
CAB39-201ENST00000258418 CUX2O14529 1486 aa20.94■□□□□ 0.94
CAB39-201ENST00000258418 ZNF777Q9ULD5 760 aaPredicted RBP20.88■□□□□ 0.93
CAB39-201ENST00000258418 RRP7BPQ9NSQ0 103 aa20.88■□□□□ 0.93
CAB39-201ENST00000258418 SYNJ1O43426 1573 aa20.84■□□□□ 0.93
CAB39-201ENST00000258418 CARMIL1Q5VZK9 1371 aa20.84■□□□□ 0.93
CAB39-201ENST00000258418 ANP32CO43423 234 aa20.84■□□□□ 0.93
CAB39-201ENST00000258418 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
CAB39-201ENST00000258418 MTUS2Q5JR59 1369 aa20.8■□□□□ 0.92
CAB39-201ENST00000258418 SENP3-EIF4A1A0A087X0R7 540 aa20.8■□□□□ 0.92
CAB39-201ENST00000258418 TONSLQ96HA7 1378 aa20.76■□□□□ 0.91
CAB39-201ENST00000258418 FKBP8Q14318 412 aa20.75■□□□□ 0.91
CAB39-201ENST00000258418 KCNH8Q96L42 1107 aa20.74■□□□□ 0.91
CAB39-201ENST00000258418 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
CAB39-201ENST00000258418 BICRAQ9NZM4 1560 aa20.7■□□□□ 0.91
CAB39-201ENST00000258418 MYT1LQ9UL68 1186 aa20.69■□□□□ 0.9
CAB39-201ENST00000258418 IRX6P78412 446 aaPredicted RBP20.68■□□□□ 0.9
CAB39-201ENST00000258418 RAB3GAP2Q9H2M9 1393 aa20.67■□□□□ 0.9
CAB39-201ENST00000258418 DHX57Q6P158 1386 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms