RNA–Protein interactions for RNA: ENST00000254765.3

POPDC3-201, Transcript of popeye domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POPDC3, Length 1,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3-201ENST00000254765 FBXW7Q969H0 707 aa11.58□□□□□ -0.56
POPDC3-201ENST00000254765 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
POPDC3-201ENST00000254765 PRIM1P49642 420 aaKnown RBP11.57□□□□□ -0.56
POPDC3-201ENST00000254765 ARHGEF1Q92888 912 aaKnown RBP11.57□□□□□ -0.56
POPDC3-201ENST00000254765 EPAS1Q99814 870 aa11.57□□□□□ -0.56
POPDC3-201ENST00000254765 MAP3K7O43318 606 aa11.56□□□□□ -0.56
POPDC3-201ENST00000254765 TSR1Q2NL82 804 aaKnown RBP11.56□□□□□ -0.56
POPDC3-201ENST00000254765 MLLT3P42568 568 aaPredicted RBP11.55□□□□□ -0.56
POPDC3-201ENST00000254765 PROX2Q3B8N5 592 aa11.54□□□□□ -0.56
POPDC3-201ENST00000254765 C6orf132Q5T0Z8 1188 aa11.54□□□□□ -0.56
POPDC3-201ENST00000254765 RNF166Q96A37 237 aaPredicted RBP11.54□□□□□ -0.56
POPDC3-201ENST00000254765 VPS9D1Q9Y2B5 631 aa11.54□□□□□ -0.56
POPDC3-201ENST00000254765 EN1Q05925 392 aaPredicted RBP11.53□□□□□ -0.56
POPDC3-201ENST00000254765 P3H3Q8IVL6 736 aa11.53□□□□□ -0.56
POPDC3-201ENST00000254765 ZBED2Q9BTP6 218 aa11.53□□□□□ -0.56
POPDC3-201ENST00000254765 TK2O00142 265 aa11.52□□□□□ -0.57
POPDC3-201ENST00000254765 PPP1R3GB7ZBB8 358 aa11.51□□□□□ -0.57
POPDC3-201ENST00000254765 HRO43593 1189 aa11.5□□□□□ -0.57
POPDC3-201ENST00000254765 OSBPP22059 807 aa11.5□□□□□ -0.57
POPDC3-201ENST00000254765 STAC3Q96MF2 364 aa11.5□□□□□ -0.57
POPDC3-201ENST00000254765 SEMA3EO15041 775 aa11.49□□□□□ -0.57
POPDC3-201ENST00000254765 CDHR5Q9HBB8 845 aa11.49□□□□□ -0.57
POPDC3-201ENST00000254765 VSIG10Q8N0Z9 540 aa11.47□□□□□ -0.57
POPDC3-201ENST00000254765 SLC4A5Q9BY07 1137 aa11.44□□□□□ -0.58
POPDC3-201ENST00000254765 KCTD12Q96CX2 325 aaKnown RBP11.43□□□□□ -0.58
POPDC3-201ENST00000254765 KIAA1468Q9P260 1216 aa11.42□□□□□ -0.58
POPDC3-201ENST00000254765 BHMG1C9JSJ3 638 aaPredicted RBP11.4□□□□□ -0.58
POPDC3-201ENST00000254765 MRPL50Q8N5N7 158 aaKnown RBP11.4□□□□□ -0.58
POPDC3-201ENST00000254765 SEPT9Q9UHD8 586 aaPredicted RBP11.4□□□□□ -0.58
POPDC3-201ENST00000254765 GOLGA8CPA6NN73 597 aa11.38□□□□□ -0.59
POPDC3-201ENST00000254765 TRIM6-TRIM34B2RNG4 842 aa11.38□□□□□ -0.59
POPDC3-201ENST00000254765 RABGEF1Q9UJ41 708 aa11.38□□□□□ -0.59
POPDC3-201ENST00000254765 TSKSQ9UJT2 592 aa11.38□□□□□ -0.59
POPDC3-201ENST00000254765 NBPF3Q9H094 633 aa11.37□□□□□ -0.59
POPDC3-201ENST00000254765 CDCA7LQ96GN5 454 aa11.36□□□□□ -0.59
POPDC3-201ENST00000254765 FAM198AQ9UFP1 575 aa11.36□□□□□ -0.59
POPDC3-201ENST00000254765 NUTM2FA1L443 756 aa11.35□□□□□ -0.59
POPDC3-201ENST00000254765 SMAPO00193 183 aa11.35□□□□□ -0.59
POPDC3-201ENST00000254765 PRSS12P56730 875 aa11.35□□□□□ -0.59
POPDC3-201ENST00000254765 TESPA1A2RU30 521 aaPredicted RBP11.34□□□□□ -0.59
POPDC3-201ENST00000254765 C3orf80F5H4A9 247 aa11.34□□□□□ -0.59
POPDC3-201ENST00000254765 PTPN5P54829 565 aa11.34□□□□□ -0.59
POPDC3-201ENST00000254765 RBM26Q5T8P6 1007 aaKnown RBP11.34□□□□□ -0.59
POPDC3-201ENST00000254765 WNT2BQ93097 391 aa11.34□□□□□ -0.59
POPDC3-201ENST00000254765 NPDC1Q9NQX5 325 aaPredicted RBP11.34□□□□□ -0.59
POPDC3-201ENST00000254765 PADI6Q6TGC4 694 aa11.32□□□□□ -0.6
POPDC3-201ENST00000254765 PACS2Q86VP3 889 aa11.31□□□□□ -0.6
POPDC3-201ENST00000254765 CERKQ8TCT0 537 aa11.3□□□□□ -0.6
POPDC3-201ENST00000254765 BCAMP50895 628 aa11.29□□□□□ -0.6
POPDC3-201ENST00000254765 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
POPDC3-201ENST00000254765 ONECUT3O60422 494 aaPredicted RBP11.28□□□□□ -0.6
POPDC3-201ENST00000254765 THSD4Q6ZMP0 1018 aa11.28□□□□□ -0.6
POPDC3-201ENST00000254765 ZFRQ96KR1 1074 aaKnown RBP11.28□□□□□ -0.6
POPDC3-201ENST00000254765 HCSTQ9UBK5 93 aa11.28□□□□□ -0.6
POPDC3-201ENST00000254765 PTGDRQ13258 359 aa11.27□□□□□ -0.61
POPDC3-201ENST00000254765 NUDT18Q6ZVK8 323 aa11.27□□□□□ -0.61
POPDC3-201ENST00000254765 ANKK1Q8NFD2 765 aa11.27□□□□□ -0.61
POPDC3-201ENST00000254765 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
POPDC3-201ENST00000254765 SMYD5Q6GMV2 418 aa11.25□□□□□ -0.61
POPDC3-201ENST00000254765 LAPTM4BQ86VI4 370 aa11.25□□□□□ -0.61
POPDC3-201ENST00000254765 TATDN2Q93075 761 aa11.25□□□□□ -0.61
POPDC3-201ENST00000254765 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
POPDC3-201ENST00000254765 FAM161AQ3B820 660 aa11.24□□□□□ -0.61
POPDC3-201ENST00000254765 FCHSD2O94868 740 aa11.21□□□□□ -0.61
POPDC3-201ENST00000254765 RBM27Q9P2N5 1060 aaKnown RBP11.21□□□□□ -0.61
POPDC3-201ENST00000254765 TTC13Q8NBP0 860 aa11.2□□□□□ -0.62
POPDC3-201ENST00000254765 SOWAHBA6NEL2 793 aa11.19□□□□□ -0.62
POPDC3-201ENST00000254765 SAMD7Q7Z3H4 446 aa11.19□□□□□ -0.62
POPDC3-201ENST00000254765 LRCH3Q96II8 777 aa11.19□□□□□ -0.62
POPDC3-201ENST00000254765 RNF40O75150 1001 aa11.18□□□□□ -0.62
POPDC3-201ENST00000254765 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
POPDC3-201ENST00000254765 FECHP22830 423 aa11.17□□□□□ -0.62
POPDC3-201ENST00000254765 GPIHBP1Q8IV16 184 aa11.17□□□□□ -0.62
POPDC3-201ENST00000254765 WBP1LQ9NX94 342 aa11.16□□□□□ -0.62
POPDC3-201ENST00000254765 HPS5Q9UPZ3 1129 aa11.16□□□□□ -0.62
POPDC3-201ENST00000254765 GPR37O15354 613 aa11.14□□□□□ -0.63
POPDC3-201ENST00000254765 EYA1Q99502 592 aa11.13□□□□□ -0.63
POPDC3-201ENST00000254765 PLA2G2EQ9NZK7 142 aa11.13□□□□□ -0.63
POPDC3-201ENST00000254765 ADGRG1Q9Y653 693 aa11.13□□□□□ -0.63
POPDC3-201ENST00000254765 TULP1O00294 542 aaPredicted RBP11.12□□□□□ -0.63
POPDC3-201ENST00000254765 SWT1Q5T5J6 900 aaKnown RBP11.12□□□□□ -0.63
POPDC3-201ENST00000254765 HIC1Q14526 733 aa11.11□□□□□ -0.63
POPDC3-201ENST00000254765 GNPATO15228 680 aa11.1□□□□□ -0.63
POPDC3-201ENST00000254765 TSR3Q9UJK0 312 aaKnown RBP11.1□□□□□ -0.63
POPDC3-201ENST00000254765 PPP4CP60510 307 aa11.09□□□□□ -0.63
POPDC3-201ENST00000254765 HDGFP51858 240 aaKnown RBP11.09□□□□□ -0.63
POPDC3-201ENST00000254765 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
POPDC3-201ENST00000254765 NLRP7Q8WX94 980 aa11.08□□□□□ -0.64
POPDC3-201ENST00000254765 RCCD1A6NED2 376 aa11.07□□□□□ -0.64
POPDC3-201ENST00000254765 SLC24A1O60721 1099 aa11.06□□□□□ -0.64
POPDC3-201ENST00000254765 DNAJB2P25686 324 aa11.05□□□□□ -0.64
POPDC3-201ENST00000254765 LMOD2Q6P5Q4 547 aa11.05□□□□□ -0.64
POPDC3-201ENST00000254765 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.05□□□□□ -0.64
POPDC3-201ENST00000254765 PXYLP1Q8TE99 480 aa11.03□□□□□ -0.64
POPDC3-201ENST00000254765 METTL3Q86U44 580 aaKnown RBP11.02□□□□□ -0.65
POPDC3-201ENST00000254765 TMEM134Q9H6X4 195 aa11.02□□□□□ -0.65
POPDC3-201ENST00000254765 OATP04181 439 aa11.01□□□□□ -0.65
POPDC3-201ENST00000254765 SLF2Q8IX21 1173 aa11.01□□□□□ -0.65
POPDC3-201ENST00000254765 APLP1P51693 650 aa11□□□□□ -0.65
POPDC3-201ENST00000254765 PHOX2BQ99453 314 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms