RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 PLCH2O75038 1416 aa5.87□□□□□ -1.47
UBE4A-201ENST00000252108 RTEL1-TNFRSF6BF6WH68 1400 aa5.87□□□□□ -1.47
UBE4A-201ENST00000252108 ERICH6Q7L0X2 663 aa5.86□□□□□ -1.47
UBE4A-201ENST00000252108 JPH4Q96JJ6 628 aa5.86□□□□□ -1.47
UBE4A-201ENST00000252108 CCDC7Q96M83 1385 aa5.86□□□□□ -1.47
UBE4A-201ENST00000252108 PRAG1Q86YV5 1406 aa5.86□□□□□ -1.47
UBE4A-201ENST00000252108 PPLO60437 1756 aa5.85□□□□□ -1.47
UBE4A-201ENST00000252108 RICTORQ6R327 1708 aa5.85□□□□□ -1.47
UBE4A-201ENST00000252108 ABCA6Q8N139 1617 aa5.85□□□□□ -1.47
UBE4A-201ENST00000252108 MAP3K4Q9Y6R4 1608 aa5.85□□□□□ -1.47
UBE4A-201ENST00000252108 PLEKHH2Q8IVE3 1493 aa5.84□□□□□ -1.47
UBE4A-201ENST00000252108 COL17A1Q9UMD9 1497 aaPredicted RBP5.84□□□□□ -1.47
UBE4A-201ENST00000252108 SYNMO15061 1565 aa5.84□□□□□ -1.47
UBE4A-201ENST00000252108 LRPPRCP42704 1394 aaKnown RBP5.84□□□□□ -1.48
UBE4A-201ENST00000252108 HECW2Q9P2P5 1572 aa5.84□□□□□ -1.48
UBE4A-201ENST00000252108 EFCAB6Q5THR3 1501 aa5.84□□□□□ -1.48
UBE4A-201ENST00000252108 INSRP06213 1382 aa5.84□□□□□ -1.48
UBE4A-201ENST00000252108 FAM50AQ14320 339 aaKnown RBP5.83□□□□□ -1.48
UBE4A-201ENST00000252108 SETD1AO15047 1707 aaKnown RBP5.83□□□□□ -1.48
UBE4A-201ENST00000252108 USP32Q8NFA0 1604 aa5.83□□□□□ -1.48
UBE4A-201ENST00000252108 RNF123Q5XPI4 1314 aa5.83□□□□□ -1.48
UBE4A-201ENST00000252108 L3MBTL2Q969R5 705 aa5.83□□□□□ -1.48
UBE4A-201ENST00000252108 ADGRB3O60242 1522 aa5.83□□□□□ -1.48
UBE4A-201ENST00000252108 SUPT16HQ9Y5B9 1047 aaKnown RBP5.82□□□□□ -1.48
UBE4A-201ENST00000252108 ARID4BQ4LE39 1312 aaPredicted RBP5.82□□□□□ -1.48
UBE4A-201ENST00000252108 SETBP1Q9Y6X0 1596 aa5.82□□□□□ -1.48
UBE4A-201ENST00000252108 ANKRD30AQ9BXX3 1397 aa5.82□□□□□ -1.48
UBE4A-201ENST00000252108 ATP7AQ04656 1500 aa5.81□□□□□ -1.48
UBE4A-201ENST00000252108 MYOM2P54296 1465 aa5.81□□□□□ -1.48
UBE4A-201ENST00000252108 ADGRB1O14514 1584 aa5.81□□□□□ -1.48
UBE4A-201ENST00000252108 SHPRHQ149N8 1683 aa5.81□□□□□ -1.48
UBE4A-201ENST00000252108 SCAPERQ9BY12 1400 aa5.81□□□□□ -1.48
UBE4A-201ENST00000252108 TRAPPC8Q9Y2L5 1435 aa5.81□□□□□ -1.48
UBE4A-201ENST00000252108 TONSLQ96HA7 1378 aa5.81□□□□□ -1.48
UBE4A-201ENST00000252108 KIF15Q9NS87 1388 aa5.8□□□□□ -1.48
UBE4A-201ENST00000252108 CFAP74Q9C0B2 1584 aa5.8□□□□□ -1.48
UBE4A-201ENST00000252108 REREQ9P2R6 1566 aa5.8□□□□□ -1.48
UBE4A-201ENST00000252108 KIF7Q2M1P5 1343 aa5.8□□□□□ -1.48
UBE4A-201ENST00000252108 GLI2P10070 1586 aa5.8□□□□□ -1.48
UBE4A-201ENST00000252108 HSPA5P11021 654 aaKnown RBP5.8□□□□□ -1.48
UBE4A-201ENST00000252108 RRP7BPQ9NSQ0 103 aa5.79□□□□□ -1.48
UBE4A-201ENST00000252108 CLTCQ00610 1675 aaKnown RBP5.79□□□□□ -1.48
UBE4A-201ENST00000252108 ARHGAP5Q13017 1502 aa5.79□□□□□ -1.48
UBE4A-201ENST00000252108 CCDC184Q52MB2 194 aa5.78□□□□□ -1.48
UBE4A-201ENST00000252108 PARD3Q8TEW0 1356 aa5.78□□□□□ -1.48
UBE4A-201ENST00000252108 ARHGEF28Q8N1W1 1705 aaKnown RBP5.78□□□□□ -1.48
UBE4A-201ENST00000252108 CAMSAP1Q5T5Y3 1602 aa5.78□□□□□ -1.48
UBE4A-201ENST00000252108 ANP32CO43423 234 aa5.78□□□□□ -1.48
UBE4A-201ENST00000252108 ITGAEP38570 1179 aa5.78□□□□□ -1.48
UBE4A-201ENST00000252108 KIF1BO60333 1816 aa5.78□□□□□ -1.48
UBE4A-201ENST00000252108 DIP2CQ9Y2E4 1556 aa5.77□□□□□ -1.48
UBE4A-201ENST00000252108 BLMP54132 1417 aaPredicted RBP5.77□□□□□ -1.49
UBE4A-201ENST00000252108 MLH3Q9UHC1 1453 aa5.77□□□□□ -1.49
UBE4A-201ENST00000252108 FANCAO15360 1455 aa5.77□□□□□ -1.49
UBE4A-201ENST00000252108 ABCC3O15438 1527 aa5.76□□□□□ -1.49
UBE4A-201ENST00000252108 PRKRIP1Q9H875 184 aaPredicted RBP5.76□□□□□ -1.49
UBE4A-201ENST00000252108 PER1O15534 1290 aaPredicted RBP5.76□□□□□ -1.49
UBE4A-201ENST00000252108 ATP1B4Q9UN42 357 aaPredicted RBP5.76□□□□□ -1.49
UBE4A-201ENST00000252108 USP47Q96K76 1375 aa5.76□□□□□ -1.49
UBE4A-201ENST00000252108 FOXD1Q16676 465 aa5.76□□□□□ -1.49
UBE4A-201ENST00000252108 TESK2Q96S53 571 aa5.76□□□□□ -1.49
UBE4A-201ENST00000252108 ANKRD26Q9UPS8 1709 aa5.76□□□□□ -1.49
UBE4A-201ENST00000252108 ASXL1Q8IXJ9 1541 aa5.76□□□□□ -1.49
UBE4A-201ENST00000252108 RSPH4AQ5TD94 716 aa5.75□□□□□ -1.49
UBE4A-201ENST00000252108 CHMP7Q8WUX9 453 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-201ENST00000252108 DDX10Q13206 875 aaKnown RBP5.75□□□□□ -1.49
UBE4A-201ENST00000252108 KTN1Q86UP2 1357 aaKnown RBP5.75□□□□□ -1.49
UBE4A-201ENST00000252108 MYO5BQ9ULV0 1848 aa5.75□□□□□ -1.49
UBE4A-201ENST00000252108 CFDP1Q9UEE9 299 aaPredicted RBP5.75□□□□□ -1.49
UBE4A-201ENST00000252108 NEXMIFQ5QGS0 1516 aa5.75□□□□□ -1.49
UBE4A-201ENST00000252108 ANP32EQ9BTT0 268 aa5.74□□□□□ -1.49
UBE4A-201ENST00000252108 SMG6Q86US8 1419 aaKnown RBP5.74□□□□□ -1.49
UBE4A-201ENST00000252108 UGGT1Q9NYU2 1555 aa5.74□□□□□ -1.49
UBE4A-201ENST00000252108 KDM5AP29375 1690 aaKnown RBP5.74□□□□□ -1.49
UBE4A-201ENST00000252108 CHIC2Q9UKJ5 165 aa5.74□□□□□ -1.49
UBE4A-201ENST00000252108 CDK11AQ9UQ88 783 aaPredicted RBP5.74□□□□□ -1.49
UBE4A-201ENST00000252108 AEBP2Q6ZN18 517 aaPredicted RBP5.73□□□□□ -1.49
UBE4A-201ENST00000252108 TMEM131LA2VDJ0 1609 aa5.73□□□□□ -1.49
UBE4A-201ENST00000252108 POGZQ7Z3K3 1410 aa5.73□□□□□ -1.49
UBE4A-201ENST00000252108 NOS1P29475 1434 aa5.73□□□□□ -1.49
UBE4A-201ENST00000252108 ERICH6BQ5W0A0 696 aa5.73□□□□□ -1.49
UBE4A-201ENST00000252108 RIMBP3CA6NJZ7 1639 aa5.73□□□□□ -1.49
UBE4A-201ENST00000252108 RIMBP3BA6NNM3 1639 aa5.73□□□□□ -1.49
UBE4A-201ENST00000252108 RIMBP3Q9UFD9 1639 aa5.73□□□□□ -1.49
UBE4A-201ENST00000252108 NRXN3Q9Y4C0 1643 aa5.73□□□□□ -1.49
UBE4A-201ENST00000252108 NUP155O75694 1391 aa5.73□□□□□ -1.49
UBE4A-201ENST00000252108 PREX1Q8TCU6 1659 aa5.73□□□□□ -1.49
UBE4A-201ENST00000252108 QRICH2Q9H0J4 1663 aa5.72□□□□□ -1.49
UBE4A-201ENST00000252108 SBNO2Q9Y2G9 1366 aa5.72□□□□□ -1.49
UBE4A-201ENST00000252108 VIRMAQ69YN4 1812 aaKnown RBP5.72□□□□□ -1.49
UBE4A-201ENST00000252108 TSHZ2Q9NRE2 1034 aa5.72□□□□□ -1.49
UBE4A-201ENST00000252108 ERVK-7P63135 1459 aa5.72□□□□□ -1.49
UBE4A-201ENST00000252108 ROCK2O75116 1388 aaKnown RBP5.72□□□□□ -1.49
UBE4A-201ENST00000252108 ZBED9Q6R2W3 1325 aa5.72□□□□□ -1.49
UBE4A-201ENST00000252108 KIF13AQ9H1H9 1805 aa5.72□□□□□ -1.49
UBE4A-201ENST00000252108 ARHGAP31Q2M1Z3 1444 aa5.72□□□□□ -1.49
UBE4A-201ENST00000252108 NPC1L1Q9UHC9 1359 aa5.72□□□□□ -1.49
UBE4A-201ENST00000252108 HIRIP3Q9BW71 556 aaPredicted RBP5.71□□□□□ -1.5
UBE4A-201ENST00000252108 DISP3Q9P2K9 1392 aa5.71□□□□□ -1.5
UBE4A-201ENST00000252108 ADGRB2O60241 1585 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms