RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 HECW1Q76N89 1606 aa14.13□□□□□ -0.15
COPA-201ENST00000241704 HDGFL2Q7Z4V5 671 aaPredicted RBP14.11□□□□□ -0.15
COPA-201ENST00000241704 IQGAP2Q13576 1575 aa14.11□□□□□ -0.15
COPA-201ENST00000241704 NUTM2DQ5VT03 806 aaPredicted RBP14.11□□□□□ -0.15
COPA-201ENST00000241704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.11□□□□□ -0.15
COPA-201ENST00000241704 PNNQ9H307 717 aaKnown RBP14.11□□□□□ -0.15
COPA-201ENST00000241704 CSB-PGBD3P0DP91 1061 aa14.09□□□□□ -0.15
COPA-201ENST00000241704 ZBED9Q6R2W3 1325 aa14.09□□□□□ -0.15
COPA-201ENST00000241704 EPRSP07814 1512 aaKnown RBP14.09□□□□□ -0.15
COPA-201ENST00000241704 USP47Q96K76 1375 aa14.08□□□□□ -0.16
COPA-201ENST00000241704 MAGI1Q96QZ7 1491 aaPredicted RBP14.08□□□□□ -0.16
COPA-201ENST00000241704 HFM1A2PYH4 1435 aa14.08□□□□□ -0.16
COPA-201ENST00000241704 BECN1Q14457 450 aa14.07□□□□□ -0.16
COPA-201ENST00000241704 MAP3K1Q13233 1512 aa14.07□□□□□ -0.16
COPA-201ENST00000241704 CCDC9Q9Y3X0 531 aaKnown RBP14.07□□□□□ -0.16
COPA-201ENST00000241704 ARHGAP5Q13017 1502 aa14.07□□□□□ -0.16
COPA-201ENST00000241704 PDE4AP27815 886 aa14.07□□□□□ -0.16
COPA-201ENST00000241704 GRIN2AQ12879 1464 aa14.07□□□□□ -0.16
COPA-201ENST00000241704 FAM43AQ8N2R8 423 aa14.06□□□□□ -0.16
COPA-201ENST00000241704 ANP32BQ92688 251 aaKnown RBP14.06□□□□□ -0.16
COPA-201ENST00000241704 NLRP13Q86W25 1043 aa14.06□□□□□ -0.16
COPA-201ENST00000241704 AFAP1Q8N556 730 aa14.06□□□□□ -0.16
COPA-201ENST00000241704 VGFO15240 615 aaPredicted RBP14.06□□□□□ -0.16
COPA-201ENST00000241704 TRIM44Q96DX7 344 aaPredicted RBP14.06□□□□□ -0.16
COPA-201ENST00000241704 STAC3Q96MF2 364 aa14.06□□□□□ -0.16
COPA-201ENST00000241704 PCF11O94913 1555 aaKnown RBP14.05□□□□□ -0.16
COPA-201ENST00000241704 NGDNQ8NEJ9 315 aaKnown RBP14.05□□□□□ -0.16
COPA-201ENST00000241704 PODXL2Q9NZ53 605 aa14.04□□□□□ -0.16
COPA-201ENST00000241704 FTSJ3Q8IY81 847 aaKnown RBP14.04□□□□□ -0.16
COPA-201ENST00000241704 TRAK1Q9UPV9 953 aa14.04□□□□□ -0.16
COPA-201ENST00000241704 NUTM2FA1L443 756 aa14.03□□□□□ -0.16
COPA-201ENST00000241704 SUPT6HQ7KZ85 1726 aaKnown RBP14.03□□□□□ -0.16
COPA-201ENST00000241704 CDK13Q14004 1512 aaKnown RBP14.03□□□□□ -0.16
COPA-201ENST00000241704 ZNF608Q9ULD9 1512 aaPredicted RBP14.03□□□□□ -0.16
COPA-201ENST00000241704 PRKRIP1Q9H875 184 aaPredicted RBP14.02□□□□□ -0.16
COPA-201ENST00000241704 PLEKHH2Q8IVE3 1493 aa14.02□□□□□ -0.16
COPA-201ENST00000241704 C9orf84Q5VXU9 1444 aa14.02□□□□□ -0.16
COPA-201ENST00000241704 TERF2IPQ9NYB0 399 aa14.02□□□□□ -0.16
COPA-201ENST00000241704 FRAT1Q92837 279 aaPredicted RBP14.02□□□□□ -0.17
COPA-201ENST00000241704 C11orf95C9JLR9 678 aaPredicted RBP14.01□□□□□ -0.17
COPA-201ENST00000241704 NFKBIBQ15653 356 aa14.01□□□□□ -0.17
COPA-201ENST00000241704 MS4A1P11836 297 aa14.01□□□□□ -0.17
COPA-201ENST00000241704 DAPK1P53355 1430 aa14□□□□□ -0.17
COPA-201ENST00000241704 PANK3Q9H999 370 aa14□□□□□ -0.17
COPA-201ENST00000241704 RTF1Q92541 710 aaKnown RBP13.99□□□□□ -0.17
COPA-201ENST00000241704 MYBBP1AQ9BQG0 1328 aaKnown RBP13.99□□□□□ -0.17
COPA-201ENST00000241704 U2AF1L5P0DN76 240 aaPredicted RBP13.98□□□□□ -0.17
COPA-201ENST00000241704 U2AF1Q01081 240 aaKnown RBP eCLIP13.98□□□□□ -0.179e-13■■■■□ 24.4
COPA-201ENST00000241704 PLB1Q6P1J6 1458 aa13.97□□□□□ -0.17
COPA-201ENST00000241704 WASHC2AQ641Q2 1341 aa13.97□□□□□ -0.17
COPA-201ENST00000241704 NAIPQ13075 1403 aa13.97□□□□□ -0.17
COPA-201ENST00000241704 ROCK1Q13464 1354 aa13.97□□□□□ -0.17
COPA-201ENST00000241704 CHMP4BQ9H444 224 aaKnown RBP13.96□□□□□ -0.17
COPA-201ENST00000241704 KIAA1107Q9UPP5 1409 aa13.96□□□□□ -0.18
COPA-201ENST00000241704 CCDC7Q96M83 1385 aa13.95□□□□□ -0.18
COPA-201ENST00000241704 RCAN3Q9UKA8 241 aa13.95□□□□□ -0.18
COPA-201ENST00000241704 KIF7Q2M1P5 1343 aa13.94□□□□□ -0.18
COPA-201ENST00000241704 PDE3BQ13370 1112 aa13.94□□□□□ -0.18
COPA-201ENST00000241704 EVC2Q86UK5 1308 aa13.93□□□□□ -0.18
COPA-201ENST00000241704 SLC4A3P48751 1232 aa13.92□□□□□ -0.18
COPA-201ENST00000241704 ZMYND15Q9H091 742 aa13.92□□□□□ -0.18
COPA-201ENST00000241704 ZNF330Q9Y3S2 320 aaPredicted RBP13.92□□□□□ -0.18
COPA-201ENST00000241704 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
COPA-201ENST00000241704 SCAPERQ9BY12 1400 aa13.91□□□□□ -0.18
COPA-201ENST00000241704 GOLGA6L3A6NEY3 463 aa13.91□□□□□ -0.18
COPA-201ENST00000241704 OS9Q13438 667 aaPredicted RBP13.9□□□□□ -0.18
COPA-201ENST00000241704 ARHGEF11O15085 1522 aa13.9□□□□□ -0.18
COPA-201ENST00000241704 RRP9O43818 475 aaKnown RBP13.9□□□□□ -0.18
COPA-201ENST00000241704 AMPHP49418 695 aa13.9□□□□□ -0.18
COPA-201ENST00000241704 GOLGA2Q08379 1002 aa13.9□□□□□ -0.18
COPA-201ENST00000241704 CALD1Q05682 793 aaKnown RBP13.89□□□□□ -0.19
COPA-201ENST00000241704 RGS3P49796 1198 aa13.89□□□□□ -0.19
COPA-201ENST00000241704 CENPJQ9HC77 1338 aaPredicted RBP13.88□□□□□ -0.19
COPA-201ENST00000241704 LTV1Q96GA3 475 aaPredicted RBP13.88□□□□□ -0.19
COPA-201ENST00000241704 PTPN23Q9H3S7 1636 aa13.88□□□□□ -0.19
COPA-201ENST00000241704 ABCC5O15440 1437 aa13.88□□□□□ -0.19
COPA-201ENST00000241704 CGNL1Q0VF96 1302 aa13.88□□□□□ -0.19
COPA-201ENST00000241704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.88□□□□□ -0.192e-6■■■□□ 15.9
COPA-201ENST00000241704 NBPF8Q3BBV2 869 aa13.88□□□□□ -0.19
COPA-201ENST00000241704 EXOC6Q8TAG9 804 aa13.88□□□□□ -0.19
COPA-201ENST00000241704 BACH2Q9BYV9 841 aa13.87□□□□□ -0.19
COPA-201ENST00000241704 CNTLNQ9NXG0 1405 aa13.87□□□□□ -0.19
COPA-201ENST00000241704 CAMSAP2Q08AD1 1489 aa13.87□□□□□ -0.19
COPA-201ENST00000241704 CCDC141Q6ZP82 1450 aa13.87□□□□□ -0.19
COPA-201ENST00000241704 RRP1P56182 461 aaKnown RBP13.86□□□□□ -0.19
COPA-201ENST00000241704 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
COPA-201ENST00000241704 MINK1Q8N4C8 1332 aaPredicted RBP13.86□□□□□ -0.19
COPA-201ENST00000241704 CCDC146Q8IYE0 955 aa13.86□□□□□ -0.19
COPA-201ENST00000241704 IPO8O15397 1037 aaKnown RBP13.85□□□□□ -0.19
COPA-201ENST00000241704 NCLP19338 710 aaKnown RBP13.85□□□□□ -0.19
COPA-201ENST00000241704 AKNAQ7Z591 1439 aa13.84□□□□□ -0.19
COPA-201ENST00000241704 KIF14Q15058 1648 aa13.83□□□□□ -0.2
COPA-201ENST00000241704 CFAP70Q5T0N1 1121 aa13.83□□□□□ -0.2
COPA-201ENST00000241704 THOC2Q8NI27 1593 aaKnown RBP13.83□□□□□ -0.2
COPA-201ENST00000241704 NBPF1Q3BBV0 1214 aa13.83□□□□□ -0.2
COPA-201ENST00000241704 SMG6Q86US8 1419 aaKnown RBP13.83□□□□□ -0.2
COPA-201ENST00000241704 FRAT2O75474 233 aaPredicted RBP13.82□□□□□ -0.2
COPA-201ENST00000241704 SLKQ9H2G2 1235 aaPredicted RBP13.82□□□□□ -0.2
COPA-201ENST00000241704 RAPGEF3O95398 923 aa13.82□□□□□ -0.2
COPA-201ENST00000241704 EVA1CP58658 441 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms