RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 TAF7LQ5H9L4 462 aa17.06■□□□□ 0.32
TARDBP-201ENST00000240185 ARGLU1Q9NWB6 273 aaPredicted RBP17.06■□□□□ 0.32
TARDBP-201ENST00000240185 CCNB3Q8WWL7 1395 aa17.06■□□□□ 0.32
TARDBP-201ENST00000240185 MTERF4Q7Z6M4 381 aaKnown RBP17.06■□□□□ 0.32
TARDBP-201ENST00000240185 IPO7O95373 1038 aaKnown RBP17.05■□□□□ 0.32
TARDBP-201ENST00000240185 SAFB2Q14151 953 aaKnown RBP eCLIP17.05■□□□□ 0.32
TARDBP-201ENST00000240185 ANO8Q9HCE9 1232 aaPredicted RBP17.05■□□□□ 0.32
TARDBP-201ENST00000240185 FAM184AQ8NB25 1140 aa17.04■□□□□ 0.32
TARDBP-201ENST00000240185 R3HCC1Q9Y3T6 440 aaKnown RBP17.04■□□□□ 0.32
TARDBP-201ENST00000240185 TNIKQ9UKE5 1360 aa17.04■□□□□ 0.32
TARDBP-201ENST00000240185 SLC4A10Q6U841 1118 aa17.03■□□□□ 0.32
TARDBP-201ENST00000240185 HDAC5Q9UQL6 1122 aa17.03■□□□□ 0.32
TARDBP-201ENST00000240185 HSP90B2PQ58FF3 399 aa17.02■□□□□ 0.32
TARDBP-201ENST00000240185 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
TARDBP-201ENST00000240185 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.32
TARDBP-201ENST00000240185 CCDC66A2RUB6 948 aa17.02■□□□□ 0.31
TARDBP-201ENST00000240185 TPM2P07951 284 aa17.02■□□□□ 0.31
TARDBP-201ENST00000240185 MNS1Q8NEH6 495 aa17.02■□□□□ 0.31
TARDBP-201ENST00000240185 PODXL2Q9NZ53 605 aa17.02■□□□□ 0.31
TARDBP-201ENST00000240185 CHMP5Q9NZZ3 219 aa17.02■□□□□ 0.31
TARDBP-201ENST00000240185 ZNF330Q9Y3S2 320 aaPredicted RBP17.02■□□□□ 0.31
TARDBP-201ENST00000240185 ACBD3Q9H3P7 528 aa17.01■□□□□ 0.31
TARDBP-201ENST00000240185 MARCH6O60337 910 aa17.01■□□□□ 0.31
TARDBP-201ENST00000240185 RUFY1Q96T51 708 aa17.01■□□□□ 0.31
TARDBP-201ENST00000240185 CHMP4AQ9BY43 222 aa17.01■□□□□ 0.31
TARDBP-201ENST00000240185 IFT57Q9NWB7 429 aa17■□□□□ 0.31
TARDBP-201ENST00000240185 DIAPH3Q9NSV4 1193 aa17■□□□□ 0.31
TARDBP-201ENST00000240185 H0YHG0 523 aa17■□□□□ 0.31
TARDBP-201ENST00000240185 HDGFL2Q7Z4V5 671 aaPredicted RBP17■□□□□ 0.31
TARDBP-201ENST00000240185 AK7Q96M32 723 aa17■□□□□ 0.31
TARDBP-201ENST00000240185 CWC15Q9P013 229 aaKnown RBP17■□□□□ 0.31
TARDBP-201ENST00000240185 CDR1P51861 262 aa16.99■□□□□ 0.31
TARDBP-201ENST00000240185 CCDC146Q8IYE0 955 aa16.99■□□□□ 0.31
TARDBP-201ENST00000240185 RILPL2Q969X0 211 aa16.98■□□□□ 0.31
TARDBP-201ENST00000240185 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
TARDBP-201ENST00000240185 CCDC191Q8NCU4 936 aa16.97■□□□□ 0.31
TARDBP-201ENST00000240185 FBXO3Q9UK99 471 aa16.97■□□□□ 0.31
TARDBP-201ENST00000240185 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
TARDBP-201ENST00000240185 SPAG9O60271 1321 aaKnown RBP16.97■□□□□ 0.31
TARDBP-201ENST00000240185 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
TARDBP-201ENST00000240185 EXOC6Q8TAG9 804 aa16.97■□□□□ 0.31
TARDBP-201ENST00000240185 RDXP35241 583 aaKnown RBP16.97■□□□□ 0.31
TARDBP-201ENST00000240185 ANKRD45Q5TZF3 282 aa16.97■□□□□ 0.31
TARDBP-201ENST00000240185 CHMP4CQ96CF2 233 aa16.97■□□□□ 0.31
TARDBP-201ENST00000240185 PCMTD1Q96MG8 357 aaPredicted RBP16.97■□□□□ 0.31
TARDBP-201ENST00000240185 MRE11P49959 708 aa16.95■□□□□ 0.3
TARDBP-201ENST00000240185 ANKRD20A12PQ8NF67 263 aa16.95■□□□□ 0.3
TARDBP-201ENST00000240185 BCL11BQ9C0K0 894 aaPredicted RBP16.95■□□□□ 0.3
TARDBP-201ENST00000240185 NFKBIBQ15653 356 aa16.94■□□□□ 0.3
TARDBP-201ENST00000240185 BICD2Q8TD16 824 aa16.94■□□□□ 0.3
TARDBP-201ENST00000240185 PLIN1O60240 522 aa16.94■□□□□ 0.3
TARDBP-201ENST00000240185 SETD5Q9C0A6 1442 aa16.94■□□□□ 0.3
TARDBP-201ENST00000240185 VPS53Q5VIR6 699 aa16.94■□□□□ 0.3
TARDBP-201ENST00000240185 RRP1P56182 461 aaKnown RBP16.92■□□□□ 0.3
TARDBP-201ENST00000240185 CCDC39Q9UFE4 941 aa16.92■□□□□ 0.3
TARDBP-201ENST00000240185 NASPP49321 788 aaPredicted RBP16.91■□□□□ 0.3
TARDBP-201ENST00000240185 CRBNQ96SW2 442 aa16.91■□□□□ 0.3
TARDBP-201ENST00000240185 STK26Q9P289 416 aa16.91■□□□□ 0.3
TARDBP-201ENST00000240185 ROCK2O75116 1388 aaKnown RBP16.91■□□□□ 0.3
TARDBP-201ENST00000240185 AKAP17AQ02040 695 aaKnown RBP16.91■□□□□ 0.3
TARDBP-201ENST00000240185 SASS6Q6UVJ0 657 aa16.91■□□□□ 0.3
TARDBP-201ENST00000240185 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.9■□□□□ 0.3
TARDBP-201ENST00000240185 FOXD1Q16676 465 aa16.9■□□□□ 0.3
TARDBP-201ENST00000240185 PKD2Q13563 968 aa16.9■□□□□ 0.3
TARDBP-201ENST00000240185 DCTN1Q14203 1278 aa16.9■□□□□ 0.3
TARDBP-201ENST00000240185 REC8O95072 547 aa16.9■□□□□ 0.3
TARDBP-201ENST00000240185 CEP164Q9UPV0 1460 aa16.9■□□□□ 0.3
TARDBP-201ENST00000240185 NUCB2P80303 420 aa16.89■□□□□ 0.29
TARDBP-201ENST00000240185 BCL2L13Q9BXK5 485 aa16.89■□□□□ 0.29
TARDBP-201ENST00000240185 BRPF3Q9ULD4 1205 aa16.89■□□□□ 0.29
TARDBP-201ENST00000240185 RBM10P98175 930 aaKnown RBP16.89■□□□□ 0.29
TARDBP-201ENST00000240185 CPLX2Q6PUV4 134 aaKnown RBP16.88■□□□□ 0.29
TARDBP-201ENST00000240185 PHLDB1Q86UU1 1377 aa16.88■□□□□ 0.29
TARDBP-201ENST00000240185 KANK1Q14678 1352 aa16.87■□□□□ 0.29
TARDBP-201ENST00000240185 CGNL1Q0VF96 1302 aa16.87■□□□□ 0.29
TARDBP-201ENST00000240185 HSP90AB3PQ58FF7 597 aa16.87■□□□□ 0.29
TARDBP-201ENST00000240185 COG6Q9Y2V7 657 aa16.87■□□□□ 0.29
TARDBP-201ENST00000240185 PLCD4Q9BRC7 762 aa16.86■□□□□ 0.29
TARDBP-201ENST00000240185 ZKSCAN1P17029 563 aaPredicted RBP16.86■□□□□ 0.29
TARDBP-201ENST00000240185 IL27Q8NEV9 243 aa16.86■□□□□ 0.29
TARDBP-201ENST00000240185 FBXW7Q969H0 707 aa16.86■□□□□ 0.29
TARDBP-201ENST00000240185 PRKCSHP14314 528 aaPredicted RBP16.86■□□□□ 0.29
TARDBP-201ENST00000240185 LMOD3Q0VAK6 560 aa16.86■□□□□ 0.29
TARDBP-201ENST00000240185 HOOK1Q9UJC3 728 aaKnown RBP16.86■□□□□ 0.29
TARDBP-201ENST00000240185 ERCC4Q92889 916 aaPredicted RBP16.86■□□□□ 0.29
TARDBP-201ENST00000240185 CCDC47Q96A33 483 aaKnown RBP16.86■□□□□ 0.29
TARDBP-201ENST00000240185 TSPYL1Q9H0U9 437 aa16.86■□□□□ 0.29
TARDBP-201ENST00000240185 VPS37CA5D8V6 355 aaPredicted RBP16.85■□□□□ 0.29
TARDBP-201ENST00000240185 ZKSCAN2Q63HK3 967 aa16.85■□□□□ 0.29
TARDBP-201ENST00000240185 HDGFP51858 240 aaKnown RBP16.85■□□□□ 0.29
TARDBP-201ENST00000240185 NAP1L1P55209 391 aaKnown RBP16.85■□□□□ 0.29
TARDBP-201ENST00000240185 TRIM29Q14134 588 aa16.85■□□□□ 0.29
TARDBP-201ENST00000240185 SYNE3Q6ZMZ3 975 aa16.85■□□□□ 0.29
TARDBP-201ENST00000240185 RNF214Q8ND24 703 aa16.85■□□□□ 0.29
TARDBP-201ENST00000240185 LEKR1Q6ZMV7 388 aa16.85■□□□□ 0.29
TARDBP-201ENST00000240185 HMGN5P82970 282 aaKnown RBP16.84■□□□□ 0.29
TARDBP-201ENST00000240185 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
TARDBP-201ENST00000240185 FRAT2O75474 233 aaPredicted RBP16.83■□□□□ 0.28
TARDBP-201ENST00000240185 PAK3O75914 559 aaPredicted RBP16.83■□□□□ 0.28
TARDBP-201ENST00000240185 CSB-PGBD3P0DP91 1061 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms