RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 HSPA5P11021 654 aaKnown RBP13.8□□□□□ -0.2
MDH1-201ENST00000233114 L3MBTL2Q969R5 705 aa13.8□□□□□ -0.2
MDH1-201ENST00000233114 KCNH8Q96L42 1107 aa13.8□□□□□ -0.2
MDH1-201ENST00000233114 KIAA1107Q9UPP5 1409 aa13.8□□□□□ -0.2
MDH1-201ENST00000233114 ATP10BO94823 1461 aa13.8□□□□□ -0.2
MDH1-201ENST00000233114 PLEKHD1A6NEE1 506 aa13.79□□□□□ -0.2
MDH1-201ENST00000233114 CNTLNQ9NXG0 1405 aa13.79□□□□□ -0.2
MDH1-201ENST00000233114 HIRIP3Q9BW71 556 aaPredicted RBP13.79□□□□□ -0.2
MDH1-201ENST00000233114 MBD5Q9P267 1494 aa13.78□□□□□ -0.2
MDH1-201ENST00000233114 GABBR2O75899 941 aa13.78□□□□□ -0.2
MDH1-201ENST00000233114 WASHC2AQ641Q2 1341 aa13.76□□□□□ -0.21
MDH1-201ENST00000233114 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
MDH1-201ENST00000233114 ANKRD50Q9ULJ7 1429 aa13.76□□□□□ -0.21
MDH1-201ENST00000233114 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
MDH1-201ENST00000233114 C9orf84Q5VXU9 1444 aa13.75□□□□□ -0.21
MDH1-201ENST00000233114 PREX2Q70Z35 1606 aa13.74□□□□□ -0.21
MDH1-201ENST00000233114 CCDC7Q96M83 1385 aa13.74□□□□□ -0.21
MDH1-201ENST00000233114 ARHGEF12Q9NZN5 1544 aa13.74□□□□□ -0.21
MDH1-201ENST00000233114 PTPRGP23470 1445 aa13.74□□□□□ -0.21
MDH1-201ENST00000233114 RSPH4AQ5TD94 716 aa13.72□□□□□ -0.21
MDH1-201ENST00000233114 MAST1Q9Y2H9 1570 aa13.71□□□□□ -0.21
MDH1-201ENST00000233114 UHRF1BP1Q6BDS2 1440 aa13.71□□□□□ -0.21
MDH1-201ENST00000233114 CHD1O14646 1710 aa13.71□□□□□ -0.22
MDH1-201ENST00000233114 CCDC141Q6ZP82 1450 aa13.7□□□□□ -0.22
MDH1-201ENST00000233114 ARID4BQ4LE39 1312 aaPredicted RBP13.7□□□□□ -0.22
MDH1-201ENST00000233114 NBPF8Q3BBV2 869 aa13.69□□□□□ -0.22
MDH1-201ENST00000233114 AMER1Q5JTC6 1135 aaPredicted RBP13.69□□□□□ -0.22
MDH1-201ENST00000233114 NEFLP07196 543 aa13.69□□□□□ -0.22
MDH1-201ENST00000233114 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
MDH1-201ENST00000233114 CDC42BPBQ9Y5S2 1711 aa13.68□□□□□ -0.22
MDH1-201ENST00000233114 SAMD9LQ8IVG5 1584 aa13.68□□□□□ -0.22
MDH1-201ENST00000233114 TSPY4P0CV99 314 aa13.68□□□□□ -0.22
MDH1-201ENST00000233114 TSPY10P0CW01 314 aa13.68□□□□□ -0.22
MDH1-201ENST00000233114 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
MDH1-201ENST00000233114 RALGAPBQ86X10 1494 aa13.67□□□□□ -0.22
MDH1-201ENST00000233114 PLEKHH2Q8IVE3 1493 aa13.67□□□□□ -0.22
MDH1-201ENST00000233114 KIF15Q9NS87 1388 aa13.67□□□□□ -0.22
MDH1-201ENST00000233114 PKD2Q13563 968 aa13.66□□□□□ -0.22
MDH1-201ENST00000233114 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
MDH1-201ENST00000233114 ABCC2Q92887 1545 aa13.65□□□□□ -0.22
MDH1-201ENST00000233114 KDM5CP41229 1560 aa13.65□□□□□ -0.22
MDH1-201ENST00000233114 NUP155O75694 1391 aa13.64□□□□□ -0.23
MDH1-201ENST00000233114 PLXNC1O60486 1568 aa13.64□□□□□ -0.23
MDH1-201ENST00000233114 UNC13BO14795 1591 aa13.64□□□□□ -0.23
MDH1-201ENST00000233114 KIF7Q2M1P5 1343 aa13.63□□□□□ -0.23
MDH1-201ENST00000233114 PRKRIP1Q9H875 184 aaPredicted RBP13.63□□□□□ -0.23
MDH1-201ENST00000233114 ROCK2O75116 1388 aaKnown RBP13.62□□□□□ -0.23
MDH1-201ENST00000233114 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
MDH1-201ENST00000233114 CD44P16070 742 aaKnown RBP13.62□□□□□ -0.23
MDH1-201ENST00000233114 USP47Q96K76 1375 aa13.62□□□□□ -0.23
MDH1-201ENST00000233114 C11orf95C9JLR9 678 aaPredicted RBP13.61□□□□□ -0.23
MDH1-201ENST00000233114 FKBP8Q14318 412 aa13.61□□□□□ -0.23
MDH1-201ENST00000233114 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
MDH1-201ENST00000233114 FAM135AQ9P2D6 1515 aa13.61□□□□□ -0.23
MDH1-201ENST00000233114 UHRF1BP1LA0JNW5 1464 aa13.6□□□□□ -0.23
MDH1-201ENST00000233114 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.6□□□□□ -0.234e-6■■□□□ 14.3
MDH1-201ENST00000233114 TTC37Q6PGP7 1564 aa13.6□□□□□ -0.23
MDH1-201ENST00000233114 LHX8Q68G74 356 aa13.59□□□□□ -0.23
MDH1-201ENST00000233114 ARHGAP5Q13017 1502 aa13.59□□□□□ -0.23
MDH1-201ENST00000233114 ERICH6BQ5W0A0 696 aa13.59□□□□□ -0.23
MDH1-201ENST00000233114 SYCP2Q9BX26 1530 aa13.59□□□□□ -0.23
MDH1-201ENST00000233114 BCORL1Q5H9F3 1711 aa13.58□□□□□ -0.24
MDH1-201ENST00000233114 HNRNPUQ00839 825 aaKnown RBP eCLIP13.58□□□□□ -0.24
MDH1-201ENST00000233114 IQGAP3Q86VI3 1631 aa13.58□□□□□ -0.24
MDH1-201ENST00000233114 CLASP1Q7Z460 1538 aa13.57□□□□□ -0.24
MDH1-201ENST00000233114 HNRNPMP52272 730 aaKnown RBP eCLIP13.56□□□□□ -0.24
MDH1-201ENST00000233114 LAMC1P11047 1609 aa13.56□□□□□ -0.24
MDH1-201ENST00000233114 DUOX2Q9NRD8 1548 aa13.56□□□□□ -0.24
MDH1-201ENST00000233114 MAGI2Q86UL8 1455 aa13.56□□□□□ -0.24
MDH1-201ENST00000233114 DHX29Q7Z478 1369 aaKnown RBP13.56□□□□□ -0.24
MDH1-201ENST00000233114 TSHZ2Q9NRE2 1034 aa13.55□□□□□ -0.24
MDH1-201ENST00000233114 ARAP3Q8WWN8 1544 aa13.55□□□□□ -0.24
MDH1-201ENST00000233114 ERBINQ96RT1 1412 aa13.55□□□□□ -0.24
MDH1-201ENST00000233114 KTN1Q86UP2 1357 aaKnown RBP13.55□□□□□ -0.24
MDH1-201ENST00000233114 ZBED9Q6R2W3 1325 aa13.54□□□□□ -0.24
MDH1-201ENST00000233114 ATP10AO60312 1499 aa13.54□□□□□ -0.24
MDH1-201ENST00000233114 ARXQ96QS3 562 aa13.53□□□□□ -0.24
MDH1-201ENST00000233114 ZCCHC11Q5TAX3 1644 aaKnown RBP13.53□□□□□ -0.24
MDH1-201ENST00000233114 MRS2Q9HD23 443 aa13.53□□□□□ -0.24
MDH1-201ENST00000233114 TRPM1Q7Z4N2 1603 aa13.52□□□□□ -0.24
MDH1-201ENST00000233114 EIF2AK4Q9P2K8 1649 aaKnown RBP13.52□□□□□ -0.24
MDH1-201ENST00000233114 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
MDH1-201ENST00000233114 PLCH2O75038 1416 aa13.52□□□□□ -0.25
MDH1-201ENST00000233114 E9PCH4 1651 aa13.51□□□□□ -0.25
MDH1-201ENST00000233114 ABCC1P33527 1531 aa13.5□□□□□ -0.25
MDH1-201ENST00000233114 GPRASP1Q5JY77 1395 aa13.5□□□□□ -0.25
MDH1-201ENST00000233114 ERCC6L2Q5T890 1561 aa13.5□□□□□ -0.25
MDH1-201ENST00000233114 PRAG1Q86YV5 1406 aa13.5□□□□□ -0.25
MDH1-201ENST00000233114 CARD11Q9BXL7 1154 aa13.5□□□□□ -0.25
MDH1-201ENST00000233114 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
MDH1-201ENST00000233114 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
MDH1-201ENST00000233114 BCANQ96GW7 911 aa13.47□□□□□ -0.25
MDH1-201ENST00000233114 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
MDH1-201ENST00000233114 PLA2R1Q13018 1463 aa13.47□□□□□ -0.25
MDH1-201ENST00000233114 CLCN6P51797 869 aa13.47□□□□□ -0.25
MDH1-201ENST00000233114 ZNF326Q5BKZ1 582 aaKnown RBP13.47□□□□□ -0.25
MDH1-201ENST00000233114 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
MDH1-201ENST00000233114 PRDM15P57071 1507 aaPredicted RBP13.45□□□□□ -0.26
MDH1-201ENST00000233114 DCAF11Q8TEB1 546 aa13.45□□□□□ -0.26
MDH1-201ENST00000233114 A2MP01023 1474 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms