RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 THOC2Q8NI27 1593 aaKnown RBP14.7□□□□□ -0.06
NOD1-201ENST00000222823 HSP90AB1P08238 724 aaKnown RBP14.7□□□□□ -0.06
NOD1-201ENST00000222823 CDK11BP21127 795 aaKnown RBP14.7□□□□□ -0.06
NOD1-201ENST00000222823 PTPRGP23470 1445 aa14.69□□□□□ -0.06
NOD1-201ENST00000222823 ROCK1Q13464 1354 aa14.69□□□□□ -0.06
NOD1-201ENST00000222823 KIF15Q9NS87 1388 aa14.69□□□□□ -0.06
NOD1-201ENST00000222823 KIAA0586Q9BVV6 1533 aa14.69□□□□□ -0.06
NOD1-201ENST00000222823 KCNJ4P48050 445 aa14.69□□□□□ -0.06
NOD1-201ENST00000222823 DAPK1P53355 1430 aa14.69□□□□□ -0.06
NOD1-201ENST00000222823 ANKRD50Q9ULJ7 1429 aa14.69□□□□□ -0.06
NOD1-201ENST00000222823 CDK13Q14004 1512 aaKnown RBP14.69□□□□□ -0.06
NOD1-201ENST00000222823 CTTNBP2Q8WZ74 1663 aa14.68□□□□□ -0.06
NOD1-201ENST00000222823 FGD1P98174 961 aa14.68□□□□□ -0.06
NOD1-201ENST00000222823 RTF1Q92541 710 aaKnown RBP14.68□□□□□ -0.06
NOD1-201ENST00000222823 TROQ12816 1431 aaPredicted RBP14.68□□□□□ -0.06
NOD1-201ENST00000222823 ST20-MTHFSA0A0A6YYL1 179 aa14.68□□□□□ -0.06
NOD1-201ENST00000222823 IPO8O15397 1037 aaKnown RBP14.68□□□□□ -0.06
NOD1-201ENST00000222823 CCDC144AA2RUR9 1427 aa14.67□□□□□ -0.06
NOD1-201ENST00000222823 SPAG9O60271 1321 aaKnown RBP14.67□□□□□ -0.06
NOD1-201ENST00000222823 NLRP13Q86W25 1043 aa14.66□□□□□ -0.06
NOD1-201ENST00000222823 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
NOD1-201ENST00000222823 MYBBP1AQ9BQG0 1328 aaKnown RBP14.64□□□□□ -0.07
NOD1-201ENST00000222823 HSCBQ8IWL3 235 aa14.64□□□□□ -0.07
NOD1-201ENST00000222823 AKNAQ7Z591 1439 aa14.64□□□□□ -0.07
NOD1-201ENST00000222823 NBPF8Q3BBV2 869 aa14.63□□□□□ -0.07
NOD1-201ENST00000222823 PRG4Q92954 1404 aaPredicted RBP14.63□□□□□ -0.07
NOD1-201ENST00000222823 NPHP1O15259 732 aa14.63□□□□□ -0.07
NOD1-201ENST00000222823 PTPRKQ15262 1439 aa14.63□□□□□ -0.07
NOD1-201ENST00000222823 KIAA1107Q9UPP5 1409 aa14.63□□□□□ -0.07
NOD1-201ENST00000222823 CALD1Q05682 793 aaKnown RBP14.62□□□□□ -0.07
NOD1-201ENST00000222823 PLCB2Q00722 1185 aa14.62□□□□□ -0.07
NOD1-201ENST00000222823 DNTTIP2Q5QJE6 756 aaKnown RBP14.62□□□□□ -0.07
NOD1-201ENST00000222823 PDE3BQ13370 1112 aa14.61□□□□□ -0.07
NOD1-201ENST00000222823 WASHC2CQ9Y4E1 1318 aa14.61□□□□□ -0.07
NOD1-201ENST00000222823 UGGT2Q9NYU1 1516 aa14.61□□□□□ -0.07
NOD1-201ENST00000222823 TERF2IPQ9NYB0 399 aa14.6□□□□□ -0.07
NOD1-201ENST00000222823 TAOK2Q9UL54 1235 aa14.6□□□□□ -0.07
NOD1-201ENST00000222823 EIF3AQ14152 1382 aaKnown RBP14.6□□□□□ -0.07
NOD1-201ENST00000222823 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
NOD1-201ENST00000222823 GOLGA2Q08379 1002 aa14.6□□□□□ -0.07
NOD1-201ENST00000222823 APBB1O00213 710 aa14.6□□□□□ -0.07
NOD1-201ENST00000222823 ANKRD30BQ9BXX2 1392 aa14.6□□□□□ -0.07
NOD1-201ENST00000222823 RWDD1Q9H446 243 aaPredicted RBP14.6□□□□□ -0.07
NOD1-201ENST00000222823 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
NOD1-201ENST00000222823 CFAP44Q96MT7 982 aa14.59□□□□□ -0.07
NOD1-201ENST00000222823 NAP1L2Q9ULW6 460 aaPredicted RBP14.59□□□□□ -0.07
NOD1-201ENST00000222823 ABCC5O15440 1437 aa14.58□□□□□ -0.07
NOD1-201ENST00000222823 TCERG1O14776 1098 aaKnown RBP14.58□□□□□ -0.08
NOD1-201ENST00000222823 ITPRIPQ8IWB1 547 aa14.58□□□□□ -0.08
NOD1-201ENST00000222823 MCCP23508 829 aa14.58□□□□□ -0.08
NOD1-201ENST00000222823 NUTM2DQ5VT03 806 aaPredicted RBP14.57□□□□□ -0.08
NOD1-201ENST00000222823 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
NOD1-201ENST00000222823 GOLGA6L4A6NEF3 574 aa14.56□□□□□ -0.08
NOD1-201ENST00000222823 SPRYD3Q8NCJ5 442 aa14.56□□□□□ -0.08
NOD1-201ENST00000222823 C9orf84Q5VXU9 1444 aa14.56□□□□□ -0.08
NOD1-201ENST00000222823 TRAK1Q9UPV9 953 aa14.56□□□□□ -0.08
NOD1-201ENST00000222823 GRIN2AQ12879 1464 aa14.55□□□□□ -0.08
NOD1-201ENST00000222823 CCDC146Q8IYE0 955 aa14.55□□□□□ -0.08
NOD1-201ENST00000222823 CLUAP1Q96AJ1 413 aa14.55□□□□□ -0.08
NOD1-201ENST00000222823 SMC4Q9NTJ3 1288 aa14.55□□□□□ -0.08
NOD1-201ENST00000222823 RTN4Q9NQC3 1192 aaKnown RBP14.54□□□□□ -0.08
NOD1-201ENST00000222823 TCOF1Q13428 1488 aaKnown RBP14.53□□□□□ -0.08
NOD1-201ENST00000222823 RPRD2Q5VT52 1461 aaKnown RBP14.53□□□□□ -0.08
NOD1-201ENST00000222823 FANCIQ9NVI1 1328 aa14.53□□□□□ -0.08
NOD1-201ENST00000222823 CHMP4AQ9BY43 222 aa14.53□□□□□ -0.08
NOD1-201ENST00000222823 CAMSAP2Q08AD1 1489 aa14.53□□□□□ -0.08
NOD1-201ENST00000222823 STK31Q9BXU1 1019 aa14.52□□□□□ -0.08
NOD1-201ENST00000222823 CSB-PGBD3P0DP91 1061 aa14.52□□□□□ -0.09
NOD1-201ENST00000222823 PANK3Q9H999 370 aa14.52□□□□□ -0.09
NOD1-201ENST00000222823 PMFBP1Q8TBY8 1022 aa14.52□□□□□ -0.09
NOD1-201ENST00000222823 KIAA1211Q6ZU35 1233 aa14.51□□□□□ -0.09
NOD1-201ENST00000222823 MAGI1Q96QZ7 1491 aaPredicted RBP14.51□□□□□ -0.09
NOD1-201ENST00000222823 NCOA1Q15788 1441 aa14.51□□□□□ -0.09
NOD1-201ENST00000222823 EID1Q9Y6B2 187 aa14.51□□□□□ -0.09
NOD1-201ENST00000222823 NGDNQ8NEJ9 315 aaKnown RBP14.5□□□□□ -0.09
NOD1-201ENST00000222823 BRD4O60885 1362 aaPredicted RBP14.5□□□□□ -0.09
NOD1-201ENST00000222823 CENPJQ9HC77 1338 aaPredicted RBP14.5□□□□□ -0.09
NOD1-201ENST00000222823 NAP1L5Q96NT1 182 aaPredicted RBP14.5□□□□□ -0.09
NOD1-201ENST00000222823 CCDC184Q52MB2 194 aa14.49□□□□□ -0.09
NOD1-201ENST00000222823 ZNF608Q9ULD9 1512 aaPredicted RBP14.49□□□□□ -0.09
NOD1-201ENST00000222823 SLKQ9H2G2 1235 aaPredicted RBP14.49□□□□□ -0.09
NOD1-201ENST00000222823 PLB1Q6P1J6 1458 aa14.49□□□□□ -0.09
NOD1-201ENST00000222823 SAMD9Q5K651 1589 aa14.49□□□□□ -0.09
NOD1-201ENST00000222823 ABCA5Q8WWZ7 1642 aa14.49□□□□□ -0.09
NOD1-201ENST00000222823 C11orf95C9JLR9 678 aaPredicted RBP14.49□□□□□ -0.09
NOD1-201ENST00000222823 NUTM2FA1L443 756 aa14.48□□□□□ -0.09
NOD1-201ENST00000222823 NRDCO43847 1150 aa14.48□□□□□ -0.09
NOD1-201ENST00000222823 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.47□□□□□ -0.09
NOD1-201ENST00000222823 RRP1P56182 461 aaKnown RBP14.47□□□□□ -0.09
NOD1-201ENST00000222823 DEKP35659 375 aaKnown RBP14.47□□□□□ -0.09
NOD1-201ENST00000222823 KIF21AQ7Z4S6 1674 aa14.47□□□□□ -0.09
NOD1-201ENST00000222823 STAC3Q96MF2 364 aa14.47□□□□□ -0.09
NOD1-201ENST00000222823 ZNF330Q9Y3S2 320 aaPredicted RBP14.47□□□□□ -0.09
NOD1-201ENST00000222823 L1TD1Q5T7N2 865 aaKnown RBP14.46□□□□□ -0.09
NOD1-201ENST00000222823 ADAMTS12P58397 1594 aa14.46□□□□□ -0.09
NOD1-201ENST00000222823 TULP1O00294 542 aaPredicted RBP14.46□□□□□ -0.09
NOD1-201ENST00000222823 VGFO15240 615 aaPredicted RBP14.46□□□□□ -0.09
NOD1-201ENST00000222823 LMOD3Q0VAK6 560 aa14.46□□□□□ -0.09
NOD1-201ENST00000222823 ARHGAP5Q13017 1502 aa14.46□□□□□ -0.09
NOD1-201ENST00000222823 HMMRO75330 724 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms