RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 CECR2Q9BXF3 1484 aa13.84□□□□□ -0.19
KNOP1-201ENST00000219837 CSPP1Q1MSJ5 1256 aa13.84□□□□□ -0.19
KNOP1-201ENST00000219837 CHMP4AQ9BY43 222 aa13.84□□□□□ -0.19
KNOP1-201ENST00000219837 SLKQ9H2G2 1235 aaPredicted RBP13.84□□□□□ -0.19
KNOP1-201ENST00000219837 C1orf141Q5JVX7 400 aa13.83□□□□□ -0.2
KNOP1-201ENST00000219837 LMOD3Q0VAK6 560 aa13.82□□□□□ -0.2
KNOP1-201ENST00000219837 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
KNOP1-201ENST00000219837 FOXD4L4Q8WXT5 416 aaPredicted RBP13.82□□□□□ -0.2
KNOP1-201ENST00000219837 TRIM34Q9BYJ4 488 aa13.82□□□□□ -0.2
KNOP1-201ENST00000219837 FBXW7Q969H0 707 aa13.81□□□□□ -0.2
KNOP1-201ENST00000219837 CCDC34Q96HJ3 373 aa13.81□□□□□ -0.2
KNOP1-201ENST00000219837 HDAC5Q9UQL6 1122 aa13.81□□□□□ -0.2
KNOP1-201ENST00000219837 RAD21O60216 631 aa13.81□□□□□ -0.2
KNOP1-201ENST00000219837 DEKP35659 375 aaKnown RBP13.81□□□□□ -0.2
KNOP1-201ENST00000219837 SMARCA2P51531 1590 aa13.81□□□□□ -0.2
KNOP1-201ENST00000219837 FMN1Q68DA7 1419 aa13.8□□□□□ -0.2
KNOP1-201ENST00000219837 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
KNOP1-201ENST00000219837 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
KNOP1-201ENST00000219837 KIF16BQ96L93 1317 aa13.79□□□□□ -0.2
KNOP1-201ENST00000219837 CEP89Q96ST8 783 aa13.79□□□□□ -0.2
KNOP1-201ENST00000219837 CLUAP1Q96AJ1 413 aa13.79□□□□□ -0.2
KNOP1-201ENST00000219837 TRAK1Q9UPV9 953 aa13.79□□□□□ -0.2
KNOP1-201ENST00000219837 CTDP1Q9Y5B0 961 aaPredicted RBP13.79□□□□□ -0.2
KNOP1-201ENST00000219837 RAB3GAP2Q9H2M9 1393 aa13.79□□□□□ -0.2
KNOP1-201ENST00000219837 NGEFQ8N5V2 710 aa13.79□□□□□ -0.2
KNOP1-201ENST00000219837 CENPJQ9HC77 1338 aaPredicted RBP13.78□□□□□ -0.2
KNOP1-201ENST00000219837 PES1O00541 588 aaKnown RBP13.78□□□□□ -0.2
KNOP1-201ENST00000219837 TPD52L1Q16890 204 aaPredicted RBP13.78□□□□□ -0.2
KNOP1-201ENST00000219837 AEBP2Q6ZN18 517 aaPredicted RBP13.78□□□□□ -0.2
KNOP1-201ENST00000219837 GOLGA6L1Q8N7Z2 621 aa13.78□□□□□ -0.2
KNOP1-201ENST00000219837 RILPL2Q969X0 211 aa13.78□□□□□ -0.2
KNOP1-201ENST00000219837 TCEAL9Q9UHQ7 104 aa13.78□□□□□ -0.2
KNOP1-201ENST00000219837 TDRD9Q8NDG6 1382 aaKnown RBP13.78□□□□□ -0.2
KNOP1-201ENST00000219837 H3BQV1 296 aa13.77□□□□□ -0.2
KNOP1-201ENST00000219837 IFFO2Q5TF58 517 aa13.77□□□□□ -0.2
KNOP1-201ENST00000219837 RRP7AQ9Y3A4 280 aaKnown RBP13.77□□□□□ -0.2
KNOP1-201ENST00000219837 TIMELESSQ9UNS1 1208 aa13.77□□□□□ -0.21
KNOP1-201ENST00000219837 NOL10Q9BSC4 688 aaKnown RBP13.77□□□□□ -0.21
KNOP1-201ENST00000219837 CCDC18Q5T9S5 1454 aa13.76□□□□□ -0.21
KNOP1-201ENST00000219837 VPS8Q8N3P4 1428 aa13.76□□□□□ -0.21
KNOP1-201ENST00000219837 SF3A1Q15459 793 aaKnown RBP13.76□□□□□ -0.21
KNOP1-201ENST00000219837 AMOTL1Q8IY63 956 aa13.75□□□□□ -0.21
KNOP1-201ENST00000219837 COG3Q96JB2 828 aa13.74□□□□□ -0.21
KNOP1-201ENST00000219837 AKAP17AQ02040 695 aaKnown RBP13.74□□□□□ -0.21
KNOP1-201ENST00000219837 KLHL34Q8N239 644 aa13.74□□□□□ -0.21
KNOP1-201ENST00000219837 GOLGA6L3A6NEY3 463 aa13.73□□□□□ -0.21
KNOP1-201ENST00000219837 KRI1Q8N9T8 703 aaKnown RBP13.73□□□□□ -0.21
KNOP1-201ENST00000219837 TCERG1O14776 1098 aaKnown RBP13.73□□□□□ -0.21
KNOP1-201ENST00000219837 TPM3P06753 285 aa13.73□□□□□ -0.21
KNOP1-201ENST00000219837 WWC1Q8IX03 1113 aa13.73□□□□□ -0.21
KNOP1-201ENST00000219837 SYTL4Q96C24 671 aaPredicted RBP13.73□□□□□ -0.21
KNOP1-201ENST00000219837 ST18O60284 1047 aa13.73□□□□□ -0.21
KNOP1-201ENST00000219837 TTC5Q8N0Z6 440 aa13.73□□□□□ -0.21
KNOP1-201ENST00000219837 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
KNOP1-201ENST00000219837 TPM2P07951 284 aa13.73□□□□□ -0.21
KNOP1-201ENST00000219837 RBM19Q9Y4C8 960 aaKnown RBP13.73□□□□□ -0.21
KNOP1-201ENST00000219837 FHOD3Q2V2M9 1422 aa13.73□□□□□ -0.21
KNOP1-201ENST00000219837 CWC22Q9HCG8 908 aaKnown RBP13.72□□□□□ -0.21
KNOP1-201ENST00000219837 FAM184AQ8NB25 1140 aa13.72□□□□□ -0.21
KNOP1-201ENST00000219837 PHF14O94880 888 aa13.72□□□□□ -0.21
KNOP1-201ENST00000219837 WIZO95785 1651 aa13.71□□□□□ -0.21
KNOP1-201ENST00000219837 UACAQ9BZF9 1416 aa13.71□□□□□ -0.21
KNOP1-201ENST00000219837 EIF2S2P20042 333 aaKnown RBP13.71□□□□□ -0.21
KNOP1-201ENST00000219837 KIF15Q9NS87 1388 aa13.7□□□□□ -0.22
KNOP1-201ENST00000219837 SYNE3Q6ZMZ3 975 aa13.7□□□□□ -0.22
KNOP1-201ENST00000219837 NECTIN2Q92692 538 aa13.7□□□□□ -0.22
KNOP1-201ENST00000219837 KIF3AQ9Y496 699 aa13.69□□□□□ -0.22
KNOP1-201ENST00000219837 VPS37DQ86XT2 251 aa13.69□□□□□ -0.22
KNOP1-201ENST00000219837 ELL2O00472 640 aaPredicted RBP13.69□□□□□ -0.22
KNOP1-201ENST00000219837 ANKRD45Q5TZF3 282 aa13.69□□□□□ -0.22
KNOP1-201ENST00000219837 FBXO3Q9UK99 471 aa13.68□□□□□ -0.22
KNOP1-201ENST00000219837 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
KNOP1-201ENST00000219837 MCTP1Q6DN14 999 aa13.67□□□□□ -0.22
KNOP1-201ENST00000219837 CCDC144AA2RUR9 1427 aa13.67□□□□□ -0.22
KNOP1-201ENST00000219837 TSR1Q2NL82 804 aaKnown RBP13.67□□□□□ -0.22
KNOP1-201ENST00000219837 RAPGEF2Q9Y4G8 1499 aa13.67□□□□□ -0.22
KNOP1-201ENST00000219837 FOXD4L6Q3SYB3 417 aaPredicted RBP13.67□□□□□ -0.22
KNOP1-201ENST00000219837 FOXD4L3Q6VB84 417 aaPredicted RBP13.67□□□□□ -0.22
KNOP1-201ENST00000219837 PANK3Q9H999 370 aa13.67□□□□□ -0.22
KNOP1-201ENST00000219837 MROH2BQ7Z745 1585 aa13.67□□□□□ -0.22
KNOP1-201ENST00000219837 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
KNOP1-201ENST00000219837 EVC2Q86UK5 1308 aa13.67□□□□□ -0.22
KNOP1-201ENST00000219837 PSME1Q06323 249 aa13.66□□□□□ -0.22
KNOP1-201ENST00000219837 MINK1Q8N4C8 1332 aaPredicted RBP13.66□□□□□ -0.22
KNOP1-201ENST00000219837 PCMTD1Q96MG8 357 aaPredicted RBP13.66□□□□□ -0.22
KNOP1-201ENST00000219837 ANO2Q9NQ90 1003 aa13.66□□□□□ -0.22
KNOP1-201ENST00000219837 DHX16O60231 1041 aaKnown RBP13.66□□□□□ -0.22
KNOP1-201ENST00000219837 APPP05067 770 aa13.66□□□□□ -0.22
KNOP1-201ENST00000219837 PHLDB1Q86UU1 1377 aa13.66□□□□□ -0.22
KNOP1-201ENST00000219837 TEFQ10587 303 aa13.65□□□□□ -0.22
KNOP1-201ENST00000219837 TRIM29Q14134 588 aa13.65□□□□□ -0.22
KNOP1-201ENST00000219837 CGNL1Q0VF96 1302 aa13.65□□□□□ -0.22
KNOP1-201ENST00000219837 NEXNQ0ZGT2 675 aa13.65□□□□□ -0.22
KNOP1-201ENST00000219837 BCL2L13Q9BXK5 485 aa13.65□□□□□ -0.22
KNOP1-201ENST00000219837 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
KNOP1-201ENST00000219837 L3MBTL2Q969R5 705 aa13.65□□□□□ -0.22
KNOP1-201ENST00000219837 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
KNOP1-201ENST00000219837 USP35Q9P2H5 1018 aa13.64□□□□□ -0.23
KNOP1-201ENST00000219837 MYBBP1AQ9BQG0 1328 aaKnown RBP13.64□□□□□ -0.23
KNOP1-201ENST00000219837 DIAPH3Q9NSV4 1193 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms