RNA–Protein interactions for RNA: ENSMUST00000200043.4

Pdlim5-212, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-212ENSMUST00000200043 CltcQ68FD5 1675 aaKnown RBP23.4■■□□□ 1.34
Pdlim5-212ENSMUST00000200043 NclP09405 707 aaKnown RBP23.4■■□□□ 1.34
Pdlim5-212ENSMUST00000200043 AlkP97793 1621 aa23.4■■□□□ 1.34
Pdlim5-212ENSMUST00000200043 Brwd3A2AHJ4 1799 aa23.39■■□□□ 1.34
Pdlim5-212ENSMUST00000200043 Abca6Q8K441 1624 aa23.39■■□□□ 1.34
Pdlim5-212ENSMUST00000200043 Mia2Q91ZV0 1396 aa23.39■■□□□ 1.33
Pdlim5-212ENSMUST00000200043 RictorQ6QI06 1708 aa23.37■■□□□ 1.33
Pdlim5-212ENSMUST00000200043 Safb2Q80YR5 991 aaKnown RBP23.36■■□□□ 1.33
Pdlim5-212ENSMUST00000200043 Afap1Q80YS6 731 aa23.36■■□□□ 1.33
Pdlim5-212ENSMUST00000200043 Fhad1A6PWD2 1420 aa23.36■■□□□ 1.33
Pdlim5-212ENSMUST00000200043 Vps8Q0P5W1 1427 aa23.35■■□□□ 1.33
Pdlim5-212ENSMUST00000200043 Prex1Q69ZK0 1650 aa23.34■■□□□ 1.33
Pdlim5-212ENSMUST00000200043 Talpid3E9PV87 1520 aa23.32■■□□□ 1.32
Pdlim5-212ENSMUST00000200043 Zfp644E9QA22 1323 aa23.32■■□□□ 1.32
Pdlim5-212ENSMUST00000200043 Trpm2Q91YD4 1506 aa23.32■■□□□ 1.32
Pdlim5-212ENSMUST00000200043 Myom2Q14BI5 1463 aa23.31■■□□□ 1.32
Pdlim5-212ENSMUST00000200043 Naip5Q9R016 1403 aa23.31■■□□□ 1.32
Pdlim5-212ENSMUST00000200043 Asxl1P59598 1514 aa23.3■■□□□ 1.32
Pdlim5-212ENSMUST00000200043 MyclP10166 368 aa23.25■■□□□ 1.31
Pdlim5-212ENSMUST00000200043 Nup155Q99P88 1391 aaKnown RBP23.25■■□□□ 1.31
Pdlim5-212ENSMUST00000200043 PtprmP28828 1452 aa23.25■■□□□ 1.31
Pdlim5-212ENSMUST00000200043 Hnrnpul2Q00PI9 745 aaKnown RBP23.24■■□□□ 1.31
Pdlim5-212ENSMUST00000200043 Dip2bQ3UH60 1574 aa23.24■■□□□ 1.31
Pdlim5-212ENSMUST00000200043 Pde4cQ3UEI1 686 aa23.23■■□□□ 1.31
Pdlim5-212ENSMUST00000200043 Knl1Q66JQ7 1612 aa23.23■■□□□ 1.31
Pdlim5-212ENSMUST00000200043 Ube2uB1AUC4 352 aa23.22■■□□□ 1.31
Pdlim5-212ENSMUST00000200043 Arhgap23Q69ZH9 1483 aa23.21■■□□□ 1.31
Pdlim5-212ENSMUST00000200043 Map4P27546 1125 aaKnown RBP23.2■■□□□ 1.3
Pdlim5-212ENSMUST00000200043 Adamts7Q68SA9 1657 aa23.19■■□□□ 1.3
Pdlim5-212ENSMUST00000200043 Robo2Q7TPD3 1470 aa23.19■■□□□ 1.3
Pdlim5-212ENSMUST00000200043 Tmem131lQ3U3D7 1597 aa23.19■■□□□ 1.3
Pdlim5-212ENSMUST00000200043 4930407I10RikD3Z5T8 1512 aa23.18■■□□□ 1.3
Pdlim5-212ENSMUST00000200043 Prdm2A2A7B5 1709 aaKnown RBP23.17■■□□□ 1.3
Pdlim5-212ENSMUST00000200043 Kif21bQ9QXL1 1668 aa23.16■■□□□ 1.3
Pdlim5-212ENSMUST00000200043 Ttll5Q8CHB8 1328 aa23.15■■□□□ 1.3
Pdlim5-212ENSMUST00000200043 Clstn2Q9ER65 966 aa23.14■■□□□ 1.3
Pdlim5-212ENSMUST00000200043 Topaz1E5FYH1 1653 aa23.14■■□□□ 1.29
Pdlim5-212ENSMUST00000200043 Akap12Q9WTQ5 1684 aa23.14■■□□□ 1.29
Pdlim5-212ENSMUST00000200043 Rsph4aQ8BYM7 716 aa23.13■■□□□ 1.29
Pdlim5-212ENSMUST00000200043 Ahdc1Q6PAL7 1594 aaKnown RBP23.13■■□□□ 1.29
Pdlim5-212ENSMUST00000200043 Lamc1P02468 1607 aaKnown RBP23.12■■□□□ 1.29
Pdlim5-212ENSMUST00000200043 Mier1Q5UAK0 511 aa23.12■■□□□ 1.29
Pdlim5-212ENSMUST00000200043 Med14A2ABV5 1459 aaKnown RBP23.11■■□□□ 1.29
Pdlim5-212ENSMUST00000200043 AnkarA2RT91 1465 aa23.09■■□□□ 1.29
Pdlim5-212ENSMUST00000200043 Hfm1D3Z4R1 1434 aa23.09■■□□□ 1.29
Pdlim5-212ENSMUST00000200043 Cd109Q8R422 1442 aa23.07■■□□□ 1.28
Pdlim5-212ENSMUST00000200043 Myom3A2ABU4 1439 aa23.06■■□□□ 1.28
Pdlim5-212ENSMUST00000200043 Ylpm1Q9R0I7 1386 aaKnown RBP23.06■■□□□ 1.28
Pdlim5-212ENSMUST00000200043 PtprgQ05909 1442 aa23.05■■□□□ 1.28
Pdlim5-212ENSMUST00000200043 Abcc6Q9R1S7 1498 aa23.05■■□□□ 1.28
Pdlim5-212ENSMUST00000200043 Ttc21bQ0HA38 1315 aa23.04■■□□□ 1.28
Pdlim5-212ENSMUST00000200043 Gm13697A2AK42 830 aa23.04■■□□□ 1.28
Pdlim5-212ENSMUST00000200043 Trak1Q6PD31 939 aa23.03■■□□□ 1.28
Pdlim5-212ENSMUST00000200043 Nsd2Q8BVE8 1365 aa23.03■■□□□ 1.28
Pdlim5-212ENSMUST00000200043 Ino80Q6ZPV2 1559 aa23.02■■□□□ 1.28
Pdlim5-212ENSMUST00000200043 Iqgap3F8VQ29 1632 aa23.01■■□□□ 1.27
Pdlim5-212ENSMUST00000200043 Mphosph9A6H5Y1 991 aa23.01■■□□□ 1.27
Pdlim5-212ENSMUST00000200043 Cyb5rlB1AS42 316 aa23.01■■□□□ 1.27
Pdlim5-212ENSMUST00000200043 Adgrb3Q80ZF8 1522 aa23■■□□□ 1.27
Pdlim5-212ENSMUST00000200043 Ercc6l2Q9JIM3 1537 aa23■■□□□ 1.27
Pdlim5-212ENSMUST00000200043 Kif13aQ9EQW7 1749 aa22.99■■□□□ 1.27
Pdlim5-212ENSMUST00000200043 Scn4aQ9ER60 1841 aa22.98■■□□□ 1.27
Pdlim5-212ENSMUST00000200043 Bcl9Q9D219 1425 aa22.98■■□□□ 1.27
Pdlim5-212ENSMUST00000200043 Atp7aQ64430 1491 aa22.97■■□□□ 1.27
Pdlim5-212ENSMUST00000200043 Chd2E9PZM4 1827 aaKnown RBP22.97■■□□□ 1.27
Pdlim5-212ENSMUST00000200043 Tarbp1E9Q368 1579 aa22.92■■□□□ 1.26
Pdlim5-212ENSMUST00000200043 Ccer2J3QPU5 274 aa22.92■■□□□ 1.26
Pdlim5-212ENSMUST00000200043 Itsn1Q9Z0R4 1714 aa22.91■■□□□ 1.26
Pdlim5-212ENSMUST00000200043 Dhx9O70133 1380 aaKnown RBP22.9■■□□□ 1.26
Pdlim5-212ENSMUST00000200043 Kdm5aQ3UXZ9 1690 aa22.9■■□□□ 1.26
Pdlim5-212ENSMUST00000200043 Erich6D3Z6S9 713 aa22.89■■□□□ 1.26
Pdlim5-212ENSMUST00000200043 Ehbp1l1Q99MS7 1716 aa22.89■■□□□ 1.26
Pdlim5-212ENSMUST00000200043 Skint5A7XUY5 1461 aa22.89■■□□□ 1.25
Pdlim5-212ENSMUST00000200043 Tecpr2Q3UH45 1423 aa22.88■■□□□ 1.25
Pdlim5-212ENSMUST00000200043 Abca8aQ8K442 1620 aa22.88■■□□□ 1.25
Pdlim5-212ENSMUST00000200043 Dip2aQ8BWT5 1523 aa22.87■■□□□ 1.25
Pdlim5-212ENSMUST00000200043 Pkd2O35245 966 aa22.85■■□□□ 1.25
Pdlim5-212ENSMUST00000200043 Edc4Q3UJB9 1406 aaKnown RBP22.84■■□□□ 1.25
Pdlim5-212ENSMUST00000200043 Pik3c2gO70167 1506 aa22.84■■□□□ 1.25
Pdlim5-212ENSMUST00000200043 Efcab6Q6P1E8 1516 aa22.84■■□□□ 1.25
Pdlim5-212ENSMUST00000200043 Uggt1Q6P5E4 1551 aa22.84■■□□□ 1.25
Pdlim5-212ENSMUST00000200043 Phlpp1Q8CHE4 1687 aa22.84■■□□□ 1.25
Pdlim5-212ENSMUST00000200043 Rimbp3Q3V0F0 1606 aa22.83■■□□□ 1.25
Pdlim5-212ENSMUST00000200043 Dot1lQ6XZL8 1540 aa22.83■■□□□ 1.25
Pdlim5-212ENSMUST00000200043 Stk24Q99KH8 431 aa22.8■■□□□ 1.24
Pdlim5-212ENSMUST00000200043 Eid3Q3V124 375 aa22.79■■□□□ 1.24
Pdlim5-212ENSMUST00000200043 Ankrd36D3Z4K0 1415 aa22.78■■□□□ 1.24
Pdlim5-212ENSMUST00000200043 ErbinQ80TH2 1402 aa22.78■■□□□ 1.24
Pdlim5-212ENSMUST00000200043 Sall3Q62255 1320 aa22.77■■□□□ 1.24
Pdlim5-212ENSMUST00000200043 Naip7Q9JIB3 1402 aa22.77■■□□□ 1.23
Pdlim5-212ENSMUST00000200043 GphnQ8BUV3 769 aaKnown RBP22.76■■□□□ 1.23
Pdlim5-212ENSMUST00000200043 Mroh1E0CZ22 1640 aa22.76■■□□□ 1.23
Pdlim5-212ENSMUST00000200043 DroshaQ5HZJ0 1373 aaKnown RBP22.75■■□□□ 1.23
Pdlim5-212ENSMUST00000200043 Scaf11E9PZM7 1456 aaKnown RBP22.74■■□□□ 1.23
Pdlim5-212ENSMUST00000200043 Rims2Q9EQZ7 1530 aa22.72■■□□□ 1.23
Pdlim5-212ENSMUST00000200043 Zc3h13E9Q784 1729 aaKnown RBP22.72■■□□□ 1.23
Pdlim5-212ENSMUST00000200043 Ltbp4Q8K4G1 1666 aa22.71■■□□□ 1.23
Pdlim5-212ENSMUST00000200043 PplQ9R269 1755 aa22.71■■□□□ 1.23
Pdlim5-212ENSMUST00000200043 Eif2ak4Q9QZ05 1648 aa22.7■■□□□ 1.22
Pdlim5-212ENSMUST00000200043 Ncoa1P70365 1447 aa22.7■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms