RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Foxp4Q9DBY0 795 aaKnown RBP14.05□□□□□ -0.16
Pdlim5-209ENSMUST00000196908 Arhgap5P97393 1501 aa14.05□□□□□ -0.16
Pdlim5-209ENSMUST00000196908 Myt1lP97500 1187 aa14.04□□□□□ -0.16
Pdlim5-209ENSMUST00000196908 Ncoa3O09000 1398 aa14.03□□□□□ -0.16
Pdlim5-209ENSMUST00000196908 Fam208aQ69ZR9 1610 aaKnown RBP14.03□□□□□ -0.16
Pdlim5-209ENSMUST00000196908 Hecw1Q8K4P8 1604 aa14.03□□□□□ -0.16
Pdlim5-209ENSMUST00000196908 Dhx57Q6P5D3 1388 aaKnown RBP14□□□□□ -0.17
Pdlim5-209ENSMUST00000196908 Riok3Q9DBU3 519 aaKnown RBP14□□□□□ -0.17
Pdlim5-209ENSMUST00000196908 Rapgef3Q8VCC8 918 aa13.99□□□□□ -0.17
Pdlim5-209ENSMUST00000196908 Kidins220E9Q9B7 1793 aa13.99□□□□□ -0.17
Pdlim5-209ENSMUST00000196908 Bcl9Q9D219 1425 aa13.98□□□□□ -0.17
Pdlim5-209ENSMUST00000196908 AlkP97793 1621 aa13.97□□□□□ -0.17
Pdlim5-209ENSMUST00000196908 Mug1P28665 1476 aa13.95□□□□□ -0.18
Pdlim5-209ENSMUST00000196908 GphnQ8BUV3 769 aaKnown RBP13.95□□□□□ -0.18
Pdlim5-209ENSMUST00000196908 ArntlQ9WTL8 632 aa13.95□□□□□ -0.18
Pdlim5-209ENSMUST00000196908 Trpm2Q91YD4 1506 aa13.95□□□□□ -0.18
Pdlim5-209ENSMUST00000196908 Arhgap23Q69ZH9 1483 aa13.94□□□□□ -0.18
Pdlim5-209ENSMUST00000196908 Rims2Q9EQZ7 1530 aa13.94□□□□□ -0.18
Pdlim5-209ENSMUST00000196908 Trappc8E9PWG2 1437 aa13.93□□□□□ -0.18
Pdlim5-209ENSMUST00000196908 Gm13697A2AK42 830 aa13.93□□□□□ -0.18
Pdlim5-209ENSMUST00000196908 Phlpp1Q8CHE4 1687 aa13.91□□□□□ -0.18
Pdlim5-209ENSMUST00000196908 Rimbp3Q3V0F0 1606 aa13.91□□□□□ -0.18
Pdlim5-209ENSMUST00000196908 HrcG5E8J6 738 aa13.9□□□□□ -0.18
Pdlim5-209ENSMUST00000196908 Scaf11E9PZM7 1456 aaKnown RBP13.89□□□□□ -0.19
Pdlim5-209ENSMUST00000196908 Kiaa1551Q5DTW7 1521 aa13.89□□□□□ -0.19
Pdlim5-209ENSMUST00000196908 CltcQ68FD5 1675 aaKnown RBP13.87□□□□□ -0.19
Pdlim5-209ENSMUST00000196908 PzpQ61838 1495 aa13.87□□□□□ -0.19
Pdlim5-209ENSMUST00000196908 Ap3b1Q9Z1T1 1105 aa13.86□□□□□ -0.19
Pdlim5-209ENSMUST00000196908 Cep162Q6ZQ06 1403 aa13.86□□□□□ -0.19
Pdlim5-209ENSMUST00000196908 Sart1Q9Z315 806 aaKnown RBP13.85□□□□□ -0.19
Pdlim5-209ENSMUST00000196908 Cdc42bpaQ3UU96 1719 aa13.84□□□□□ -0.19
Pdlim5-209ENSMUST00000196908 Knl1Q66JQ7 1612 aa13.84□□□□□ -0.19
Pdlim5-209ENSMUST00000196908 Zranb1Q7M760 708 aa13.84□□□□□ -0.19
Pdlim5-209ENSMUST00000196908 Zc3h13E9Q784 1729 aaKnown RBP13.84□□□□□ -0.19
Pdlim5-209ENSMUST00000196908 Tdrd9Q14BI7 1383 aa13.83□□□□□ -0.19
Pdlim5-209ENSMUST00000196908 Nyap1Q6PFX7 833 aa13.83□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Trpm1Q2TV84 1622 aa13.82□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Abcc3B2RX12 1523 aa13.82□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Tom1O88746 492 aa13.82□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Cdc42bpgQ80UW5 1551 aa13.82□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Map3k5O35099 1380 aa13.81□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Npm3Q9CPP0 175 aaKnown RBP13.8□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Slit2Q9R1B9 1521 aa13.8□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Kdm3bQ6ZPY7 1562 aa13.79□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 RictorQ6QI06 1708 aa13.79□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Naip6Q9JIB6 1403 aa13.79□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Gli2Q0VGT2 1544 aa13.79□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Cfap74Q3UY96 1578 aa13.79□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Evx2P49749 475 aa13.78□□□□□ -0.2
Pdlim5-209ENSMUST00000196908 Gm32742A0A1B0GT42 1604 aa13.77□□□□□ -0.21
Pdlim5-209ENSMUST00000196908 Nlrp6Q91WS2 869 aa13.77□□□□□ -0.21
Pdlim5-209ENSMUST00000196908 Med14A2ABV5 1459 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-209ENSMUST00000196908 Setd5Q5XJV7 1441 aa13.76□□□□□ -0.21
Pdlim5-209ENSMUST00000196908 DroshaQ5HZJ0 1373 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-209ENSMUST00000196908 Cypt2Q6P924 180 aa13.75□□□□□ -0.21
Pdlim5-209ENSMUST00000196908 NinlQ6ZQ12 1394 aa13.74□□□□□ -0.21
Pdlim5-209ENSMUST00000196908 Arid4bA2CG63 1314 aaKnown RBP13.74□□□□□ -0.21
Pdlim5-209ENSMUST00000196908 Lmod2Q3UHZ5 550 aa13.74□□□□□ -0.21
Pdlim5-209ENSMUST00000196908 Fhod3Q76LL6 1578 aa13.71□□□□□ -0.21
Pdlim5-209ENSMUST00000196908 Znf518aB2RRF6 1478 aaKnown RBP13.71□□□□□ -0.21
Pdlim5-209ENSMUST00000196908 DnmbpQ6TXD4 1580 aa13.71□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Ccnb3Q810T2 1396 aa13.71□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Nos1Q9Z0J4 1429 aa13.7□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Peg3Q3URU2 1571 aa13.7□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Lmo7E9PYF4 1699 aaKnown RBP13.69□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Cdc42bpbQ7TT50 1713 aa13.69□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Pdcd11Q6NS46 1862 aaKnown RBP13.69□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Abcc6Q9R1S7 1498 aa13.68□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Pcf11G3X9Z4 1553 aa13.68□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Nrxn3Q6P9K9 1571 aa13.67□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Iqgap1Q9JKF1 1657 aaKnown RBP13.67□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Kif3bQ61771 747 aa13.67□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 NexmifQ5DTT1 1515 aa13.67□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Med1Q925J9 1575 aa13.66□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Gimap5Q8BWF2 308 aa13.66□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Slc5a4bQ91ZP4 660 aa13.66□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Tubgcp6G5E8P0 1769 aa13.66□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Fnbp4Q6ZQ03 1031 aa13.65□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Amigo3Q8C2S7 508 aa13.65□□□□□ -0.22
Pdlim5-209ENSMUST00000196908 Caskin1Q6P9K8 1431 aa13.64□□□□□ -0.23
Pdlim5-209ENSMUST00000196908 Naip5Q9R016 1403 aa13.64□□□□□ -0.23
Pdlim5-209ENSMUST00000196908 Cdk13Q69ZA1 1511 aaKnown RBP13.64□□□□□ -0.23
Pdlim5-209ENSMUST00000196908 Skida1Q80YR3 822 aa13.64□□□□□ -0.23
Pdlim5-209ENSMUST00000196908 Dok7Q18PE0 504 aa13.63□□□□□ -0.23
Pdlim5-209ENSMUST00000196908 Cadps2Q8BYR5 1297 aa13.63□□□□□ -0.23
Pdlim5-209ENSMUST00000196908 Tiam1Q60610 1591 aa13.61□□□□□ -0.23
Pdlim5-209ENSMUST00000196908 Sema6bO54951 886 aa13.6□□□□□ -0.23
Pdlim5-209ENSMUST00000196908 Rrp7aQ9D1C9 280 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-209ENSMUST00000196908 Adcy10Q8C0T9 1614 aa13.59□□□□□ -0.23
Pdlim5-209ENSMUST00000196908 3425401B19RikD3Z1D3 1412 aa13.58□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Brinp3Q499E0 766 aa13.58□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Eea1Q8BL66 1411 aa13.57□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 MpndQ3TV65 487 aa13.57□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Gm1043A0A140LJC2 1431 aa13.56□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Hfm1D3Z4R1 1434 aa13.56□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Adgrl1Q80TR1 1466 aa13.56□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Qtrt2B8ZXI1 415 aa13.56□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Rpgrip1Q9EPQ2 1331 aa13.56□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 CntlnA2AM05 1397 aa13.56□□□□□ -0.24
Pdlim5-209ENSMUST00000196908 Uggt2E9Q4X2 1504 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms