RNA–Protein interactions for RNA: ENSMUST00000190949.1

Gm28979-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28979, Length 1,540 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28979-201ENSMUST00000190949 Pde8bE9Q4S1 865 aa14.15□□□□□ -0.14
Gm28979-201ENSMUST00000190949 Rnf166Q3U9F6 237 aa14.15□□□□□ -0.14
Gm28979-201ENSMUST00000190949 Cc2d2bA0A286YDU8 1405 aa14.15□□□□□ -0.14
Gm28979-201ENSMUST00000190949 Rad54l2Q99NG0 1466 aa14.15□□□□□ -0.14
Gm28979-201ENSMUST00000190949 Mllt6B1AR10 1109 aa14.14□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Pbrm1Q8BSQ9 1634 aaKnown RBP14.14□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Arhgef5E9Q7D5 1581 aa14.13□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Cep170Q6A065 1588 aa14.12□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Cnksr2Q80YA9 1032 aa14.11□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Ric3Q8BPM6 367 aa14.11□□□□□ -0.15
Gm28979-201ENSMUST00000190949 PtprkP35822 1457 aa14.11□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Magi3Q9EQJ9 1476 aa14.11□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Plekhg3Q4VAC9 1341 aa14.1□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Grin2aP35436 1464 aa14.09□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Gapvd1Q6PAR5 1458 aa14.09□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Gabbr2Q80T41 940 aa14.09□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Gm156Q58A37 223 aa14.08□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Ttbk1Q6PCN3 1308 aa14.08□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Efcab5A0JP43 1406 aa14.08□□□□□ -0.16
Gm28979-201ENSMUST00000190949 AqrQ8CFQ3 1481 aaKnown RBP14.08□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Fgd6Q69ZL1 1399 aa14.07□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Rem2Q8VEL9 341 aa14.07□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Erbb3Q61526 1339 aa14.06□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Prdm16A2A935 1275 aa14.06□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Slc7a3P70423 618 aa14.06□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Emid1Q91VF5 444 aa14.06□□□□□ -0.16
Gm28979-201ENSMUST00000190949 PtprtQ99M80 1454 aa14.06□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Tmc3Q7TQ69 1130 aa14.05□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Dnajc5gQ8C632 165 aa14.04□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Unc5aQ8K1S4 898 aa14.04□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Farp1F8VPU2 1048 aa14.01□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Ms4a4cQ9D3F6 226 aa14.01□□□□□ -0.17
Gm28979-201ENSMUST00000190949 AknaQ80VW7 1404 aa14.01□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Abcc1O35379 1528 aa13.99□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Pla2r1Q62028 1487 aa13.99□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Pprc1Q6NZN1 1644 aa13.99□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Ccdc88bQ4QRL3 1481 aa13.98□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Nudt12Q9DCN1 462 aa13.98□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Gm11563B1AQ90 168 aa13.96□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Myt1Q8CFC2 1127 aa13.96□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Krtap4-7Q9D732 168 aa13.96□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Ythdc2B2RR83 1445 aaKnown RBP13.96□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Slain2Q8CI08 581 aa13.95□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Rapgef2Q8CHG7 1496 aa13.94□□□□□ -0.18
Gm28979-201ENSMUST00000190949 NrkQ9R0G8 1455 aa13.94□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Top2aQ01320 1528 aaKnown RBP13.93□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Chd1P40201 1711 aa13.93□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Gpatch8A2A6A1 1505 aa13.92□□□□□ -0.18
Gm28979-201ENSMUST00000190949 SynmQ70IV5 1561 aa13.92□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Prr7Q3V0I2 269 aa13.9□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Shroom4Q1W617 1475 aa13.9□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Ciz1Q8VEH2 845 aa13.9□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Dnmt1P13864 1620 aaKnown RBP13.89□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Tpcn2Q8BWC0 731 aa13.89□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Bcl11bQ99PV8 884 aa13.89□□□□□ -0.19
Gm28979-201ENSMUST00000190949 CadpsQ80TJ1 1355 aa13.88□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Abcc2Q8VI47 1543 aa13.88□□□□□ -0.19
Gm28979-201ENSMUST00000190949 BC005561E9Q5E2 1589 aa13.87□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Psen1P49769 467 aa13.87□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Foxd4Q60688 444 aa13.87□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Ano8Q6PB70 1060 aa13.87□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Ints3Q7TPD0 1041 aaKnown RBP13.87□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Neo1P97798 1493 aa13.87□□□□□ -0.19
Gm28979-201ENSMUST00000190949 LtbrP50284 415 aa13.86□□□□□ -0.19
Gm28979-201ENSMUST00000190949 XpcP51612 930 aa13.86□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Abca16E9PWJ7 1678 aa13.85□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Setbp1Q9Z180 1582 aa13.85□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Soga1E1U8D0 1418 aa13.85□□□□□ -0.19
Gm28979-201ENSMUST00000190949 GnpatP98192 678 aa13.85□□□□□ -0.19
Gm28979-201ENSMUST00000190949 PxdnQ3UQ28 1475 aa13.85□□□□□ -0.19
Gm28979-201ENSMUST00000190949 E2f4Q8R0K9 410 aa13.85□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Kctd12Q6WVG3 327 aa13.84□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Slc24a3Q99PD7 645 aa13.84□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Arhgap27A2AB59 869 aa13.83□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Scaf8Q6DID3 1268 aa13.82□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Irx6Q9ER75 438 aa13.82□□□□□ -0.2
Gm28979-201ENSMUST00000190949 WizO88286 1684 aaKnown RBP13.82□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Map3k4O08648 1597 aa13.81□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Gm11555B1AQ89 175 aa13.81□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Tsr1Q5SWD9 803 aa13.8□□□□□ -0.2
Gm28979-201ENSMUST00000190949 MetrnQ8C1Q4 291 aa13.8□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Ttll13A4Q9F6 804 aa13.8□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Spryd3E9Q9B3 442 aa13.8□□□□□ -0.2
Gm28979-201ENSMUST00000190949 TchhA0A0B4J1F9 1599 aa13.79□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Gm14025A2AP89 1413 aa13.79□□□□□ -0.2
Gm28979-201ENSMUST00000190949 A930017K11RikE0CXQ2 571 aa13.79□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Nfxl1E9Q8I7 918 aaKnown RBP13.78□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Ppp1r18Q8BQ30 594 aa13.78□□□□□ -0.2
Gm28979-201ENSMUST00000190949 VaspP70460 375 aaKnown RBP13.77□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Ak9G3UYQ4 1894 aa13.76□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Eif4g1Q6NZJ6 1600 aaKnown RBP13.76□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Fbxo31Q3TQF0 507 aa13.76□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Adamts12Q811B3 1600 aa13.76□□□□□ -0.21
Gm28979-201ENSMUST00000190949 AI481877A2ALV5 1481 aa13.75□□□□□ -0.21
Gm28979-201ENSMUST00000190949 EprsQ8CGC7 1512 aaKnown RBP13.75□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Mre11Q61216 706 aa13.74□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Slx4Q6P1D7 1565 aa13.73□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Arhgef12Q8R4H2 1543 aaKnown RBP13.72□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Taok2Q6ZQ29 1240 aa13.72□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Irf6P97431 467 aa13.71□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms