RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 RalgapbQ8BQZ4 1484 aa38.52■■■■□ 3.76
Ldb1-208ENSMUST00000185355 AI481877A2ALV5 1481 aa38.51■■■■□ 3.76
Ldb1-208ENSMUST00000185355 Plekhg5Q66T02 1073 aa38.5■■■■□ 3.75
Ldb1-208ENSMUST00000185355 Gm13695A2AK44 830 aa38.5■■■■□ 3.75
Ldb1-208ENSMUST00000185355 Rundc1Q0VDN7 615 aa38.5■■■■□ 3.75
Ldb1-208ENSMUST00000185355 Cd109Q8R422 1442 aa38.5■■■■□ 3.75
Ldb1-208ENSMUST00000185355 Cdk13Q69ZA1 1511 aaKnown RBP38.49■■■■□ 3.75
Ldb1-208ENSMUST00000185355 Polr3aB2RXC6 1390 aa38.48■■■■□ 3.75
Ldb1-208ENSMUST00000185355 Kidins220E9Q9B7 1793 aa38.46■■■■□ 3.75
Ldb1-208ENSMUST00000185355 Hnrnpul2Q00PI9 745 aaKnown RBP38.46■■■■□ 3.75
Ldb1-208ENSMUST00000185355 Card11Q8CIS0 1159 aa38.45■■■■□ 3.75
Ldb1-208ENSMUST00000185355 Ppip5k1A2ARP1 1436 aa38.43■■■■□ 3.74
Ldb1-208ENSMUST00000185355 Atp7aQ64430 1491 aa38.43■■■■□ 3.74
Ldb1-208ENSMUST00000185355 Robo2Q7TPD3 1470 aa38.41■■■■□ 3.74
Ldb1-208ENSMUST00000185355 Abca17E9PX95 1733 aa38.4■■■■□ 3.74
Ldb1-208ENSMUST00000185355 Spag9Q58A65 1321 aaKnown RBP38.39■■■■□ 3.74
Ldb1-208ENSMUST00000185355 Rock2P70336 1388 aa38.37■■■■□ 3.73
Ldb1-208ENSMUST00000185355 Znf608Q56A10 1511 aa38.37■■■■□ 3.73
Ldb1-208ENSMUST00000185355 Ythdc2B2RR83 1445 aaKnown RBP38.34■■■■□ 3.73
Ldb1-208ENSMUST00000185355 Grwd1Q810D6 446 aaKnown RBP38.33■■■■□ 3.73
Ldb1-208ENSMUST00000185355 Kif1bQ60575 1816 aaKnown RBP38.33■■■■□ 3.73
Ldb1-208ENSMUST00000185355 Tarbp1E9Q368 1579 aa38.32■■■■□ 3.72
Ldb1-208ENSMUST00000185355 Cep170Q6A065 1588 aa38.31■■■■□ 3.72
Ldb1-208ENSMUST00000185355 Washc2Q6PGL7 1334 aa38.3■■■■□ 3.72
Ldb1-208ENSMUST00000185355 Zbtb7cQ8VCZ7 619 aa38.3■■■■□ 3.72
Ldb1-208ENSMUST00000185355 Usp54Q8BL06 1588 aaKnown RBP38.29■■■■□ 3.72
Ldb1-208ENSMUST00000185355 ShprhQ7TPQ3 1674 aa38.28■■■■□ 3.72
Ldb1-208ENSMUST00000185355 Xrn1P97789 1719 aaKnown RBP38.25■■■■□ 3.71
Ldb1-208ENSMUST00000185355 Mrs2Q5NCE8 434 aa38.24■■■■□ 3.71
Ldb1-208ENSMUST00000185355 Hdac5Q9Z2V6 1113 aa38.24■■■■□ 3.71
Ldb1-208ENSMUST00000185355 Setd1aE9PYH6 1716 aa38.24■■■■□ 3.71
Ldb1-208ENSMUST00000185355 Zfyve16Q80U44 1528 aa38.23■■■■□ 3.71
Ldb1-208ENSMUST00000185355 Map3k5O35099 1380 aa38.22■■■■□ 3.71
Ldb1-208ENSMUST00000185355 Pde4cQ3UEI1 686 aa38.22■■■■□ 3.71
Ldb1-208ENSMUST00000185355 Nsd2Q8BVE8 1365 aa38.2■■■■□ 3.71
Ldb1-208ENSMUST00000185355 PtprtQ99M80 1454 aa38.19■■■■□ 3.7
Ldb1-208ENSMUST00000185355 Exoc6Q8R313 802 aa38.18■■■■□ 3.7
Ldb1-208ENSMUST00000185355 Abca9Q8K449 1623 aa38.17■■■■□ 3.7
Ldb1-208ENSMUST00000185355 Gapvd1Q6PAR5 1458 aa38.16■■■■□ 3.7
Ldb1-208ENSMUST00000185355 PnisrA2AJT4 805 aaKnown RBP38.13■■■■□ 3.7
Ldb1-208ENSMUST00000185355 Wwc2Q6NXJ0 1187 aa38.13■■■■□ 3.7
Ldb1-208ENSMUST00000185355 Edc4Q3UJB9 1406 aaKnown RBP38.13■■■■□ 3.69
Ldb1-208ENSMUST00000185355 Slc4a2P13808 1237 aaKnown RBP38.13■■■■□ 3.69
Ldb1-208ENSMUST00000185355 Slc24a1Q91WD8 1130 aa38.12■■■■□ 3.69
Ldb1-208ENSMUST00000185355 Myo5cE9Q1F5 1742 aa38.12■■■■□ 3.69
Ldb1-208ENSMUST00000185355 CenpbP27790 599 aa38.11■■■■□ 3.69
Ldb1-208ENSMUST00000185355 NrdcQ8BHG1 1161 aa38.1■■■■□ 3.69
Ldb1-208ENSMUST00000185355 Adamts13Q769J6 1426 aa38.1■■■■□ 3.69
Ldb1-208ENSMUST00000185355 Nos1Q9Z0J4 1429 aa38.06■■■■□ 3.68
Ldb1-208ENSMUST00000185355 Ifnlr1Q8CGK5 535 aa38.06■■■■□ 3.68
Ldb1-208ENSMUST00000185355 Kdm5cP41230 1554 aa38.04■■■■□ 3.68
Ldb1-208ENSMUST00000185355 Ylpm1Q9R0I7 1386 aaKnown RBP38.02■■■■□ 3.68
Ldb1-208ENSMUST00000185355 Tubgcp6G5E8P0 1769 aa38.01■■■■□ 3.67
Ldb1-208ENSMUST00000185355 Tulp4Q9JIL5 1547 aa37.99■■■■□ 3.67
Ldb1-208ENSMUST00000185355 Ifit1bl1D3Z6F0 470 aa37.96■■■■□ 3.67
Ldb1-208ENSMUST00000185355 Pelp1Q9DBD5 1123 aaKnown RBP37.96■■■■□ 3.67
Ldb1-208ENSMUST00000185355 Znf518aB2RRF6 1478 aaKnown RBP37.94■■■■□ 3.66
Ldb1-208ENSMUST00000185355 Uggt2E9Q4X2 1504 aa37.94■■■■□ 3.66
Ldb1-208ENSMUST00000185355 Lemd3Q9WU40 921 aa37.94■■■■□ 3.66
Ldb1-208ENSMUST00000185355 Fndc1E9Q043 1732 aa37.92■■■■□ 3.66
Ldb1-208ENSMUST00000185355 Mroh3A0A1D5RM54 893 aa37.92■■■■□ 3.66
Ldb1-208ENSMUST00000185355 SafbD3YXK2 937 aaKnown RBP37.89■■■■□ 3.66
Ldb1-208ENSMUST00000185355 Abcc6Q9R1S7 1498 aa37.89■■■■□ 3.66
Ldb1-208ENSMUST00000185355 Gm38655A0A286YDK6 273 aa37.89■■■■□ 3.66
Ldb1-208ENSMUST00000185355 Tmem131lQ3U3D7 1597 aa37.88■■■■□ 3.65
Ldb1-208ENSMUST00000185355 Arid3cA6PWV5 409 aa37.86■■■■□ 3.65
Ldb1-208ENSMUST00000185355 Calr4Q3TQS0 420 aa37.85■■■■□ 3.65
Ldb1-208ENSMUST00000185355 AnkarA2RT91 1465 aa37.85■■■■□ 3.65
Ldb1-208ENSMUST00000185355 Kif3bQ61771 747 aa37.84■■■■□ 3.65
Ldb1-208ENSMUST00000185355 Plch2A2AP18 1501 aa37.84■■■■□ 3.65
Ldb1-208ENSMUST00000185355 Abca6Q8K441 1624 aa37.82■■■■□ 3.65
Ldb1-208ENSMUST00000185355 Topbp1Q6ZQF0 1515 aa37.81■■■■□ 3.64
Ldb1-208ENSMUST00000185355 Iqgap3F8VQ29 1632 aa37.79■■■■□ 3.64
Ldb1-208ENSMUST00000185355 OvosQ3UU35 1456 aa37.77■■■■□ 3.64
Ldb1-208ENSMUST00000185355 Pabpn1Q8CCS6 302 aaKnown RBP37.74■■■■□ 3.63
Ldb1-208ENSMUST00000185355 Ttc21bQ0HA38 1315 aa37.73■■■■□ 3.63
Ldb1-208ENSMUST00000185355 Erich6D3Z6S9 713 aa37.73■■■■□ 3.63
Ldb1-208ENSMUST00000185355 Cep152A2AUM9 1736 aaKnown RBP37.73■■■■□ 3.63
Ldb1-208ENSMUST00000185355 Atp10aO54827 1508 aa37.71■■■■□ 3.63
Ldb1-208ENSMUST00000185355 Pola1P33609 1465 aa37.71■■■■□ 3.63
Ldb1-208ENSMUST00000185355 Abca8aQ8K442 1620 aa37.7■■■■□ 3.63
Ldb1-208ENSMUST00000185355 Prex1Q69ZK0 1650 aa37.7■■■■□ 3.63
Ldb1-208ENSMUST00000185355 Anp32bQ9EST5 272 aaKnown RBP37.7■■■■□ 3.63
Ldb1-208ENSMUST00000185355 Zmym4A2A791 1549 aaKnown RBP37.69■■■■□ 3.62
Ldb1-208ENSMUST00000185355 Sbno1Q689Z5 1390 aa37.68■■■■□ 3.62
Ldb1-208ENSMUST00000185355 Depdc5P61460 1591 aa37.68■■■■□ 3.62
Ldb1-208ENSMUST00000185355 ErbinQ80TH2 1402 aa37.67■■■■□ 3.62
Ldb1-208ENSMUST00000185355 Arid4bA2CG63 1314 aaKnown RBP37.66■■■■□ 3.62
Ldb1-208ENSMUST00000185355 AglF8VPN4 1532 aa37.65■■■■□ 3.62
Ldb1-208ENSMUST00000185355 PrxO55103 1391 aa37.64■■■■□ 3.62
Ldb1-208ENSMUST00000185355 Cdc42bpgQ80UW5 1551 aa37.62■■■■□ 3.61
Ldb1-208ENSMUST00000185355 Sall3Q62255 1320 aa37.61■■■■□ 3.61
Ldb1-208ENSMUST00000185355 Eif5bQ05D44 1216 aaKnown RBP37.6■■■■□ 3.61
Ldb1-208ENSMUST00000185355 Itsn2Q9Z0R6 1659 aa37.6■■■■□ 3.61
Ldb1-208ENSMUST00000185355 Zbtb4Q5F293 982 aa37.6■■■■□ 3.61
Ldb1-208ENSMUST00000185355 Srcin1Q9QWI6 1250 aa37.6■■■■□ 3.61
Ldb1-208ENSMUST00000185355 Gli2Q0VGT2 1544 aa37.59■■■■□ 3.61
Ldb1-208ENSMUST00000185355 Ak9G3UYQ4 1894 aa37.58■■■■□ 3.61
Ldb1-208ENSMUST00000185355 Trpm1Q2TV84 1622 aa37.58■■■■□ 3.61
Ldb1-208ENSMUST00000185355 Ehbp1l1Q99MS7 1716 aa37.57■■■■□ 3.6
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms