RNA–Protein interactions for RNA: ENSMUST00000156585.7

Ldb1-207, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,014 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-207ENSMUST00000156585 Zfyve16Q80U44 1528 aa38■■■■□ 3.67
Ldb1-207ENSMUST00000156585 Myom3A2ABU4 1439 aa37.99■■■■□ 3.67
Ldb1-207ENSMUST00000156585 Cwc22Q8C5N3 908 aaKnown RBP37.97■■■■□ 3.67
Ldb1-207ENSMUST00000156585 Pabpn1Q8CCS6 302 aaKnown RBP37.95■■■■□ 3.67
Ldb1-207ENSMUST00000156585 Atp7aQ64430 1491 aa37.95■■■■□ 3.66
Ldb1-207ENSMUST00000156585 Map3k5O35099 1380 aa37.94■■■■□ 3.66
Ldb1-207ENSMUST00000156585 Cpsf1Q9EPU4 1441 aaKnown RBP37.94■■■■□ 3.66
Ldb1-207ENSMUST00000156585 Stra8P70278 393 aa37.94■■■■□ 3.66
Ldb1-207ENSMUST00000156585 Abca17E9PX95 1733 aa37.93■■■■□ 3.66
Ldb1-207ENSMUST00000156585 Robo2Q7TPD3 1470 aa37.91■■■■□ 3.66
Ldb1-207ENSMUST00000156585 Rundc1Q0VDN7 615 aa37.9■■■■□ 3.66
Ldb1-207ENSMUST00000156585 Pde4cQ3UEI1 686 aa37.89■■■■□ 3.66
Ldb1-207ENSMUST00000156585 Abca9Q8K449 1623 aa37.89■■■■□ 3.66
Ldb1-207ENSMUST00000156585 Iqgap1Q9JKF1 1657 aaKnown RBP37.88■■■■□ 3.65
Ldb1-207ENSMUST00000156585 Polr3aB2RXC6 1390 aa37.87■■■■□ 3.65
Ldb1-207ENSMUST00000156585 Ppip5k1A2ARP1 1436 aa37.87■■■■□ 3.65
Ldb1-207ENSMUST00000156585 Cep170Q6A065 1588 aa37.87■■■■□ 3.65
Ldb1-207ENSMUST00000156585 Usp54Q8BL06 1588 aaKnown RBP37.86■■■■□ 3.65
Ldb1-207ENSMUST00000156585 Naip6Q9JIB6 1403 aa37.86■■■■□ 3.65
Ldb1-207ENSMUST00000156585 Kif1bQ60575 1816 aaKnown RBP37.86■■■■□ 3.65
Ldb1-207ENSMUST00000156585 Arid3cA6PWV5 409 aa37.85■■■■□ 3.65
Ldb1-207ENSMUST00000156585 Card11Q8CIS0 1159 aa37.84■■■■□ 3.65
Ldb1-207ENSMUST00000156585 ShprhQ7TPQ3 1674 aa37.82■■■■□ 3.65
Ldb1-207ENSMUST00000156585 Cdk13Q69ZA1 1511 aaKnown RBP37.82■■■■□ 3.65
Ldb1-207ENSMUST00000156585 Grwd1Q810D6 446 aaKnown RBP37.82■■■■□ 3.65
Ldb1-207ENSMUST00000156585 RalgapbQ8BQZ4 1484 aa37.81■■■■□ 3.64
Ldb1-207ENSMUST00000156585 Hnrnpul2Q00PI9 745 aaKnown RBP37.81■■■■□ 3.64
Ldb1-207ENSMUST00000156585 Hdac5Q9Z2V6 1113 aa37.81■■■■□ 3.64
Ldb1-207ENSMUST00000156585 Xrn1P97789 1719 aaKnown RBP37.81■■■■□ 3.64
Ldb1-207ENSMUST00000156585 Washc2Q6PGL7 1334 aa37.79■■■■□ 3.64
Ldb1-207ENSMUST00000156585 Tarbp1E9Q368 1579 aa37.78■■■■□ 3.64
Ldb1-207ENSMUST00000156585 Lemd3Q9WU40 921 aa37.78■■■■□ 3.64
Ldb1-207ENSMUST00000156585 Nsd2Q8BVE8 1365 aa37.77■■■■□ 3.64
Ldb1-207ENSMUST00000156585 Plekhg5Q66T02 1073 aa37.77■■■■□ 3.64
Ldb1-207ENSMUST00000156585 Nos1Q9Z0J4 1429 aa37.74■■■■□ 3.63
Ldb1-207ENSMUST00000156585 Edc4Q3UJB9 1406 aaKnown RBP37.67■■■■□ 3.62
Ldb1-207ENSMUST00000156585 Rock2P70336 1388 aa37.66■■■■□ 3.62
Ldb1-207ENSMUST00000156585 Gm13695A2AK44 830 aa37.65■■■■□ 3.62
Ldb1-207ENSMUST00000156585 Myo5cE9Q1F5 1742 aa37.64■■■■□ 3.62
Ldb1-207ENSMUST00000156585 Znf518aB2RRF6 1478 aaKnown RBP37.62■■■■□ 3.61
Ldb1-207ENSMUST00000156585 Ylpm1Q9R0I7 1386 aaKnown RBP37.61■■■■□ 3.61
Ldb1-207ENSMUST00000156585 Tnnt3Q9QZ47 272 aa37.61■■■■□ 3.61
Ldb1-207ENSMUST00000156585 Kif3bQ61771 747 aa37.6■■■■□ 3.61
Ldb1-207ENSMUST00000156585 OvosQ3UU35 1456 aa37.56■■■■□ 3.6
Ldb1-207ENSMUST00000156585 Csrnp3P59055 597 aa37.56■■■■□ 3.6
Ldb1-207ENSMUST00000156585 Gm156Q58A37 223 aa37.56■■■■□ 3.6
Ldb1-207ENSMUST00000156585 Adamts13Q769J6 1426 aa37.55■■■■□ 3.6
Ldb1-207ENSMUST00000156585 Znf710Q3U288 666 aa37.53■■■■□ 3.6
Ldb1-207ENSMUST00000156585 Mroh3A0A1D5RM54 893 aa37.51■■■■□ 3.59
Ldb1-207ENSMUST00000156585 Kdm5cP41230 1554 aa37.5■■■■□ 3.59
Ldb1-207ENSMUST00000156585 Ifit1bl1D3Z6F0 470 aa37.49■■■■□ 3.59
Ldb1-207ENSMUST00000156585 Fndc1E9Q043 1732 aa37.49■■■■□ 3.59
Ldb1-207ENSMUST00000156585 Ak9G3UYQ4 1894 aa37.48■■■■□ 3.59
Ldb1-207ENSMUST00000156585 Plch2A2AP18 1501 aa37.46■■■■□ 3.59
Ldb1-207ENSMUST00000156585 Setd1aE9PYH6 1716 aa37.46■■■■□ 3.59
Ldb1-207ENSMUST00000156585 Atp10aO54827 1508 aa37.44■■■■□ 3.58
Ldb1-207ENSMUST00000156585 Topbp1Q6ZQF0 1515 aa37.43■■■■□ 3.58
Ldb1-207ENSMUST00000156585 AnkarA2RT91 1465 aa37.43■■■■□ 3.58
Ldb1-207ENSMUST00000156585 Tulp4Q9JIL5 1547 aa37.42■■■■□ 3.58
Ldb1-207ENSMUST00000156585 Ttc21bQ0HA38 1315 aa37.41■■■■□ 3.58
Ldb1-207ENSMUST00000156585 Tmem131lQ3U3D7 1597 aa37.41■■■■□ 3.58
Ldb1-207ENSMUST00000156585 Mrs2Q5NCE8 434 aa37.41■■■■□ 3.58
Ldb1-207ENSMUST00000156585 Erich6D3Z6S9 713 aa37.4■■■■□ 3.58
Ldb1-207ENSMUST00000156585 Abca6Q8K441 1624 aa37.4■■■■□ 3.58
Ldb1-207ENSMUST00000156585 AglF8VPN4 1532 aa37.4■■■■□ 3.58
Ldb1-207ENSMUST00000156585 Abcc6Q9R1S7 1498 aa37.39■■■■□ 3.58
Ldb1-207ENSMUST00000156585 Uggt2E9Q4X2 1504 aa37.38■■■■□ 3.57
Ldb1-207ENSMUST00000156585 Exoc6Q8R313 802 aa37.36■■■■□ 3.57
Ldb1-207ENSMUST00000156585 Wwc2Q6NXJ0 1187 aa37.36■■■■□ 3.57
Ldb1-207ENSMUST00000156585 Iqgap3F8VQ29 1632 aa37.3■■■■□ 3.56
Ldb1-207ENSMUST00000156585 Adgrl3Q80TS3 1537 aa37.3■■■■□ 3.56
Ldb1-207ENSMUST00000156585 PnisrA2AJT4 805 aaKnown RBP37.29■■■■□ 3.56
Ldb1-207ENSMUST00000156585 Gli2Q0VGT2 1544 aa37.29■■■■□ 3.56
Ldb1-207ENSMUST00000156585 Depdc5P61460 1591 aa37.29■■■■□ 3.56
Ldb1-207ENSMUST00000156585 Cdc42bpgQ80UW5 1551 aa37.29■■■■□ 3.56
Ldb1-207ENSMUST00000156585 Prex1Q69ZK0 1650 aa37.29■■■■□ 3.56
Ldb1-207ENSMUST00000156585 Slc4a2P13808 1237 aaKnown RBP37.28■■■■□ 3.56
Ldb1-207ENSMUST00000156585 Slc24a1Q91WD8 1130 aa37.28■■■■□ 3.56
Ldb1-207ENSMUST00000156585 Ptch1Q61115 1434 aa37.27■■■■□ 3.56
Ldb1-207ENSMUST00000156585 ErbinQ80TH2 1402 aa37.27■■■■□ 3.56
Ldb1-207ENSMUST00000156585 NrdcQ8BHG1 1161 aa37.27■■■■□ 3.56
Ldb1-207ENSMUST00000156585 Clasp1Q80TV8 1535 aaKnown RBP37.26■■■■□ 3.56
Ldb1-207ENSMUST00000156585 Kiaa0556Q8C753 1610 aa37.25■■■■□ 3.55
Ldb1-207ENSMUST00000156585 Sall3Q62255 1320 aa37.24■■■■□ 3.55
Ldb1-207ENSMUST00000156585 Col17a1Q07563 1470 aa37.23■■■■□ 3.55
Ldb1-207ENSMUST00000156585 Abca8aQ8K442 1620 aa37.2■■■■□ 3.55
Ldb1-207ENSMUST00000156585 Tubgcp6G5E8P0 1769 aa37.19■■■■□ 3.54
Ldb1-207ENSMUST00000156585 RereQ80TZ9 1558 aa37.18■■■■□ 3.54
Ldb1-207ENSMUST00000156585 Dip2cE9PWR4 1557 aa37.18■■■■□ 3.54
Ldb1-207ENSMUST00000156585 Cep152A2AUM9 1736 aaKnown RBP37.14■■■■□ 3.54
Ldb1-207ENSMUST00000156585 Aplp2Q06335 707 aa37.14■■■■□ 3.54
Ldb1-207ENSMUST00000156585 Stk24Q99KH8 431 aa37.14■■■■□ 3.54
Ldb1-207ENSMUST00000156585 Kdm2aP59997 1161 aa37.12■■■■□ 3.53
Ldb1-207ENSMUST00000156585 Zbtb4Q5F293 982 aa37.12■■■■□ 3.53
Ldb1-207ENSMUST00000156585 AdgbG3UZ78 1657 aa37.1■■■■□ 3.53
Ldb1-207ENSMUST00000156585 Akap12Q9WTQ5 1684 aa37.09■■■■□ 3.53
Ldb1-207ENSMUST00000156585 Adgrb3Q80ZF8 1522 aa37.09■■■■□ 3.53
Ldb1-207ENSMUST00000156585 Srcin1Q9QWI6 1250 aa37.09■■■■□ 3.53
Ldb1-207ENSMUST00000156585 AatkQ80YE4 1365 aa37.07■■■■□ 3.53
Ldb1-207ENSMUST00000156585 Ehbp1l1Q99MS7 1716 aa37.06■■■■□ 3.52
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms