RNA–Protein interactions for RNA: ENSMUST00000112519.8

Chfr-202, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Chfr, Length 3,159 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-202ENSMUST00000112519 Arid3cA6PWV5 409 aa17.99■□□□□ 0.47
Chfr-202ENSMUST00000112519 Bcl11aQ9QYE3 773 aa17.99■□□□□ 0.47
Chfr-202ENSMUST00000112519 Cdk13Q69ZA1 1511 aaKnown RBP17.98■□□□□ 0.47
Chfr-202ENSMUST00000112519 Nolc1E9Q5C9 702 aaKnown RBP17.97■□□□□ 0.47
Chfr-202ENSMUST00000112519 Adgrl2Q8JZZ7 1487 aa17.96■□□□□ 0.47
Chfr-202ENSMUST00000112519 Cdc42bpbQ7TT50 1713 aa17.96■□□□□ 0.47
Chfr-202ENSMUST00000112519 Card11Q8CIS0 1159 aa17.96■□□□□ 0.47
Chfr-202ENSMUST00000112519 Ythdc2B2RR83 1445 aaKnown RBP17.96■□□□□ 0.47
Chfr-202ENSMUST00000112519 Mbd5B1AYB6 1498 aa17.95■□□□□ 0.46
Chfr-202ENSMUST00000112519 Pdcd11Q6NS46 1862 aaKnown RBP17.94■□□□□ 0.46
Chfr-202ENSMUST00000112519 Ppp4r2Q0VGB7 417 aa17.94■□□□□ 0.46
Chfr-202ENSMUST00000112519 Exoc6Q8R313 802 aa17.94■□□□□ 0.46
Chfr-202ENSMUST00000112519 Cd109Q8R422 1442 aa17.93■□□□□ 0.46
Chfr-202ENSMUST00000112519 Dot1lQ6XZL8 1540 aa17.93■□□□□ 0.46
Chfr-202ENSMUST00000112519 Spag9Q58A65 1321 aaKnown RBP17.92■□□□□ 0.46
Chfr-202ENSMUST00000112519 Washc2Q6PGL7 1334 aa17.92■□□□□ 0.46
Chfr-202ENSMUST00000112519 Abca8bQ8K440 1620 aa17.92■□□□□ 0.46
Chfr-202ENSMUST00000112519 PtprgQ05909 1442 aa17.92■□□□□ 0.46
Chfr-202ENSMUST00000112519 Atp7aQ64430 1491 aa17.91■□□□□ 0.46
Chfr-202ENSMUST00000112519 PtprtQ99M80 1454 aa17.9■□□□□ 0.46
Chfr-202ENSMUST00000112519 Clstn2Q9ER65 966 aa17.89■□□□□ 0.46
Chfr-202ENSMUST00000112519 Myom3A2ABU4 1439 aa17.88■□□□□ 0.45
Chfr-202ENSMUST00000112519 Pde4cQ3UEI1 686 aa17.88■□□□□ 0.45
Chfr-202ENSMUST00000112519 Cfap74Q3UY96 1578 aa17.88■□□□□ 0.45
Chfr-202ENSMUST00000112519 Abcc3B2RX12 1523 aa17.88■□□□□ 0.45
Chfr-202ENSMUST00000112519 Mast1Q9R1L5 1570 aa17.87■□□□□ 0.45
Chfr-202ENSMUST00000112519 Erich6D3Z6S9 713 aa17.87■□□□□ 0.45
Chfr-202ENSMUST00000112519 Slc4a2P13808 1237 aaKnown RBP17.87■□□□□ 0.45
Chfr-202ENSMUST00000112519 AI481877A2ALV5 1481 aa17.86■□□□□ 0.45
Chfr-202ENSMUST00000112519 Kidins220E9Q9B7 1793 aa17.86■□□□□ 0.45
Chfr-202ENSMUST00000112519 Kiaa1210E9Q0C6 1637 aa17.86■□□□□ 0.45
Chfr-202ENSMUST00000112519 Tarbp1E9Q368 1579 aa17.85■□□□□ 0.45
Chfr-202ENSMUST00000112519 Naip6Q9JIB6 1403 aa17.84■□□□□ 0.45
Chfr-202ENSMUST00000112519 Cwc22Q8C5N3 908 aaKnown RBP17.84■□□□□ 0.45
Chfr-202ENSMUST00000112519 Ifit1bl1D3Z6F0 470 aa17.83■□□□□ 0.45
Chfr-202ENSMUST00000112519 Gm13695A2AK44 830 aa17.81■□□□□ 0.44
Chfr-202ENSMUST00000112519 Igf1rQ60751 1373 aa17.81■□□□□ 0.44
Chfr-202ENSMUST00000112519 Prdm16A2A935 1275 aa17.81■□□□□ 0.44
Chfr-202ENSMUST00000112519 Wdr43Q6ZQL4 677 aaKnown RBP17.8■□□□□ 0.44
Chfr-202ENSMUST00000112519 Hecw1Q8K4P8 1604 aa17.8■□□□□ 0.44
Chfr-202ENSMUST00000112519 Kif3bQ61771 747 aa17.8■□□□□ 0.44
Chfr-202ENSMUST00000112519 RalgapbQ8BQZ4 1484 aa17.8■□□□□ 0.44
Chfr-202ENSMUST00000112519 Gapvd1Q6PAR5 1458 aa17.79■□□□□ 0.44
Chfr-202ENSMUST00000112519 Sall3Q62255 1320 aa17.79■□□□□ 0.44
Chfr-202ENSMUST00000112519 Usp54Q8BL06 1588 aaKnown RBP17.79■□□□□ 0.44
Chfr-202ENSMUST00000112519 DroshaQ5HZJ0 1373 aaKnown RBP17.79■□□□□ 0.44
Chfr-202ENSMUST00000112519 Iqgap1Q9JKF1 1657 aaKnown RBP17.79■□□□□ 0.44
Chfr-202ENSMUST00000112519 Slc4a3P16283 1227 aa17.79■□□□□ 0.44
Chfr-202ENSMUST00000112519 Polr3aB2RXC6 1390 aa17.78■□□□□ 0.44
Chfr-202ENSMUST00000112519 Plekhg5Q66T02 1073 aa17.78■□□□□ 0.44
Chfr-202ENSMUST00000112519 Rock1P70335 1354 aa17.77■□□□□ 0.44
Chfr-202ENSMUST00000112519 Cpsf1Q9EPU4 1441 aaKnown RBP17.77■□□□□ 0.44
Chfr-202ENSMUST00000112519 Mroh3A0A1D5RM54 893 aa17.77■□□□□ 0.43
Chfr-202ENSMUST00000112519 ShprhQ7TPQ3 1674 aa17.76■□□□□ 0.43
Chfr-202ENSMUST00000112519 Xrn1P97789 1719 aaKnown RBP17.76■□□□□ 0.43
Chfr-202ENSMUST00000112519 Zfyve16Q80U44 1528 aa17.76■□□□□ 0.43
Chfr-202ENSMUST00000112519 Neurl4Q5NCX5 1563 aa17.75■□□□□ 0.43
Chfr-202ENSMUST00000112519 Kif1bQ60575 1816 aaKnown RBP17.74■□□□□ 0.43
Chfr-202ENSMUST00000112519 Supt16hQ920B9 1047 aa17.74■□□□□ 0.43
Chfr-202ENSMUST00000112519 Abca9Q8K449 1623 aa17.74■□□□□ 0.43
Chfr-202ENSMUST00000112519 Edc4Q3UJB9 1406 aaKnown RBP17.74■□□□□ 0.43
Chfr-202ENSMUST00000112519 Kdm2aP59997 1161 aa17.73■□□□□ 0.43
Chfr-202ENSMUST00000112519 Ofd1Q80Z25 1017 aa17.73■□□□□ 0.43
Chfr-202ENSMUST00000112519 Lemd3Q9WU40 921 aa17.73■□□□□ 0.43
Chfr-202ENSMUST00000112519 Robo2Q7TPD3 1470 aa17.72■□□□□ 0.43
Chfr-202ENSMUST00000112519 PnisrA2AJT4 805 aaKnown RBP17.71■□□□□ 0.43
Chfr-202ENSMUST00000112519 Adamts13Q769J6 1426 aa17.71■□□□□ 0.43
Chfr-202ENSMUST00000112519 Pabpn1Q8CCS6 302 aaKnown RBP17.71■□□□□ 0.42
Chfr-202ENSMUST00000112519 Cep170Q6A065 1588 aa17.69■□□□□ 0.42
Chfr-202ENSMUST00000112519 Abca17E9PX95 1733 aa17.68■□□□□ 0.42
Chfr-202ENSMUST00000112519 Stk24Q99KH8 431 aa17.68■□□□□ 0.42
Chfr-202ENSMUST00000112519 PrkcshO08795 521 aa17.67■□□□□ 0.42
Chfr-202ENSMUST00000112519 Rad21Q61550 635 aaKnown RBP17.65■□□□□ 0.42
Chfr-202ENSMUST00000112519 Myo5cE9Q1F5 1742 aa17.64■□□□□ 0.41
Chfr-202ENSMUST00000112519 Rock2P70336 1388 aa17.64■□□□□ 0.41
Chfr-202ENSMUST00000112519 Tulp4Q9JIL5 1547 aa17.64■□□□□ 0.41
Chfr-202ENSMUST00000112519 Nsd2Q8BVE8 1365 aa17.64■□□□□ 0.41
Chfr-202ENSMUST00000112519 Kcnh8P59111 1102 aa17.63■□□□□ 0.41
Chfr-202ENSMUST00000112519 Nos1Q9Z0J4 1429 aa17.63■□□□□ 0.41
Chfr-202ENSMUST00000112519 Os9Q8K2C7 672 aa17.63■□□□□ 0.41
Chfr-202ENSMUST00000112519 Ppip5k1A2ARP1 1436 aa17.62■□□□□ 0.41
Chfr-202ENSMUST00000112519 Ttc21bQ0HA38 1315 aa17.61■□□□□ 0.41
Chfr-202ENSMUST00000112519 Gm156Q58A37 223 aa17.61■□□□□ 0.41
Chfr-202ENSMUST00000112519 Pank3Q8R2W9 370 aa17.61■□□□□ 0.41
Chfr-202ENSMUST00000112519 Pak3Q61036 559 aa17.6■□□□□ 0.41
Chfr-202ENSMUST00000112519 Abca6Q8K441 1624 aa17.6■□□□□ 0.41
Chfr-202ENSMUST00000112519 Rpgrip1lQ8CG73 1264 aa17.6■□□□□ 0.41
Chfr-202ENSMUST00000112519 Inpp5dQ9ES52 1191 aa17.6■□□□□ 0.41
Chfr-202ENSMUST00000112519 Ptch1Q61115 1434 aa17.6■□□□□ 0.41
Chfr-202ENSMUST00000112519 Kdm5cP41230 1554 aa17.59■□□□□ 0.41
Chfr-202ENSMUST00000112519 Abcc6Q9R1S7 1498 aa17.59■□□□□ 0.41
Chfr-202ENSMUST00000112519 Ylpm1Q9R0I7 1386 aaKnown RBP17.58■□□□□ 0.41
Chfr-202ENSMUST00000112519 Ttbk1Q6PCN3 1308 aa17.57■□□□□ 0.4
Chfr-202ENSMUST00000112519 Q7TT23 1179 aa17.57■□□□□ 0.4
Chfr-202ENSMUST00000112519 Col17a1Q07563 1470 aa17.57■□□□□ 0.4
Chfr-202ENSMUST00000112519 PrxO55103 1391 aa17.56■□□□□ 0.4
Chfr-202ENSMUST00000112519 Fndc1E9Q043 1732 aa17.56■□□□□ 0.4
Chfr-202ENSMUST00000112519 Srcin1Q9QWI6 1250 aa17.55■□□□□ 0.4
Chfr-202ENSMUST00000112519 Znf518aB2RRF6 1478 aaKnown RBP17.55■□□□□ 0.4
Chfr-202ENSMUST00000112519 Gm20521D3Z5F7 333 aa17.54■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms