RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Sh3bgrQ9WUZ7 214 aa7.45□□□□□ -1.22
Vcan-203ENSMUST00000109546 Acbd3Q8BMP6 525 aa7.45□□□□□ -1.22
Vcan-203ENSMUST00000109546 Map9Q3TRR0 646 aa7.45□□□□□ -1.22
Vcan-203ENSMUST00000109546 Lmod2Q3UHZ5 550 aa7.45□□□□□ -1.22
Vcan-203ENSMUST00000109546 Brd4Q9ESU6 1400 aaKnown RBP7.44□□□□□ -1.22
Vcan-203ENSMUST00000109546 Nap1l3Q794H2 544 aa7.44□□□□□ -1.22
Vcan-203ENSMUST00000109546 StambpQ9CQ26 424 aa7.44□□□□□ -1.22
Vcan-203ENSMUST00000109546 Fam107bQ3TGF2 131 aa7.44□□□□□ -1.22
Vcan-203ENSMUST00000109546 Luc7lQ9CYI4 371 aaKnown RBP7.44□□□□□ -1.22
Vcan-203ENSMUST00000109546 Fez2Q6TYB5 348 aa7.43□□□□□ -1.22
Vcan-203ENSMUST00000109546 Hmgb3O54879 200 aaKnown RBP7.43□□□□□ -1.22
Vcan-203ENSMUST00000109546 Phf14Q9D4H9 881 aa7.43□□□□□ -1.22
Vcan-203ENSMUST00000109546 MecomP14404 1042 aa7.42□□□□□ -1.22
Vcan-203ENSMUST00000109546 Wdr78E9PYY5 807 aa7.42□□□□□ -1.22
Vcan-203ENSMUST00000109546 Stk11ipQ3TAA7 1072 aa7.42□□□□□ -1.22
Vcan-203ENSMUST00000109546 Mia2Q91ZV0 1396 aa7.42□□□□□ -1.22
Vcan-203ENSMUST00000109546 Npm1Q61937 292 aaKnown RBP7.42□□□□□ -1.22
Vcan-203ENSMUST00000109546 4933428M09RikQ9D3X3 192 aa7.42□□□□□ -1.22
Vcan-203ENSMUST00000109546 Ctr9Q62018 1173 aaKnown RBP7.42□□□□□ -1.22
Vcan-203ENSMUST00000109546 U2surpQ6NV83 1029 aaKnown RBP7.41□□□□□ -1.22
Vcan-203ENSMUST00000109546 ClasrpQ8CFC7 668 aa7.41□□□□□ -1.22
Vcan-203ENSMUST00000109546 Gm21969J3QJZ1 289 aa7.41□□□□□ -1.22
Vcan-203ENSMUST00000109546 Fkbp15Q6P9Q6 1216 aaKnown RBP7.41□□□□□ -1.22
Vcan-203ENSMUST00000109546 Phldb2Q8K1N2 1249 aa7.41□□□□□ -1.22
Vcan-203ENSMUST00000109546 Ipo4Q8VI75 1082 aa7.4□□□□□ -1.22
Vcan-203ENSMUST00000109546 Cfap57Q9D180 1249 aa7.4□□□□□ -1.22
Vcan-203ENSMUST00000109546 Utp3Q9JI13 469 aaKnown RBP7.4□□□□□ -1.22
Vcan-203ENSMUST00000109546 Nol10Q5RJG1 687 aaKnown RBP7.4□□□□□ -1.22
Vcan-203ENSMUST00000109546 Clstn1Q9EPL2 979 aa7.4□□□□□ -1.23
Vcan-203ENSMUST00000109546 Gprasp1Q5U4C1 1347 aa7.4□□□□□ -1.23
Vcan-203ENSMUST00000109546 Ubxn4Q8VCH8 506 aa7.4□□□□□ -1.23
Vcan-203ENSMUST00000109546 Fam13bQ8K2H3 851 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Kiaa0753Q6A000 959 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Wdr63B2RY71 923 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Kri1Q8VDQ9 704 aaKnown RBP7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Pip4k2aO70172 405 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Cplx2P84086 134 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Gm44503E9PYU5 387 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Tmco3Q8BH01 678 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Gpatch3Q8BIY1 525 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Dnaaf4Q8R368 420 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Cdr1E9Q0B4 517 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Casq1O09165 405 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Kif20aP97329 887 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 B4galnt3Q6L8S8 986 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Exosc9Q9JHI7 438 aaKnown RBP7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 Tex35Q14BK3 207 aa7.39□□□□□ -1.23
Vcan-203ENSMUST00000109546 IncenpQ9WU62 880 aa7.38□□□□□ -1.23
Vcan-203ENSMUST00000109546 Eif3aP23116 1344 aaKnown RBP7.38□□□□□ -1.23
Vcan-203ENSMUST00000109546 Drc7Q6V3W6 876 aa7.38□□□□□ -1.23
Vcan-203ENSMUST00000109546 Dixdc1Q80Y83 711 aa7.38□□□□□ -1.23
Vcan-203ENSMUST00000109546 Ccar1Q8CH18 1146 aaKnown RBP7.38□□□□□ -1.23
Vcan-203ENSMUST00000109546 Arid4aF8VPQ2 1261 aaKnown RBP7.38□□□□□ -1.23
Vcan-203ENSMUST00000109546 Nat10Q8K224 1024 aaKnown RBP7.38□□□□□ -1.23
Vcan-203ENSMUST00000109546 CrebrfQ8CDG5 640 aaKnown RBP7.37□□□□□ -1.23
Vcan-203ENSMUST00000109546 Clul1Q3ZRW6 464 aa7.37□□□□□ -1.23
Vcan-203ENSMUST00000109546 Nop14Q8R3N1 860 aaKnown RBP7.37□□□□□ -1.23
Vcan-203ENSMUST00000109546 Eif3j1Q3UGC7 261 aaKnown RBP7.37□□□□□ -1.23
Vcan-203ENSMUST00000109546 Eif3j2Q66JS6 263 aa7.37□□□□□ -1.23
Vcan-203ENSMUST00000109546 IqcgQ80W32 419 aa7.37□□□□□ -1.23
Vcan-203ENSMUST00000109546 Ddx11Q6AXC6 880 aa7.37□□□□□ -1.23
Vcan-203ENSMUST00000109546 Spag5Q7TME2 1165 aa7.37□□□□□ -1.23
Vcan-203ENSMUST00000109546 LarsQ8BMJ2 1178 aa7.37□□□□□ -1.23
Vcan-203ENSMUST00000109546 PdcQ9QW08 244 aa7.37□□□□□ -1.23
Vcan-203ENSMUST00000109546 CntlnA2AM05 1397 aa7.37□□□□□ -1.23
Vcan-203ENSMUST00000109546 AcrbpQ3V140 540 aa7.36□□□□□ -1.23
Vcan-203ENSMUST00000109546 KinQ8K339 391 aa7.36□□□□□ -1.23
Vcan-203ENSMUST00000109546 1700010I14RikQ7TPG0 532 aa7.36□□□□□ -1.23
Vcan-203ENSMUST00000109546 Mcm3P25206 812 aaKnown RBP7.36□□□□□ -1.23
Vcan-203ENSMUST00000109546 Kif3bQ61771 747 aa7.36□□□□□ -1.23
Vcan-203ENSMUST00000109546 Ssr1Q9CY50 286 aaKnown RBP7.36□□□□□ -1.23
Vcan-203ENSMUST00000109546 Ddx23D3Z0M9 819 aaKnown RBP7.36□□□□□ -1.23
Vcan-203ENSMUST00000109546 Syap1Q9D5V6 365 aa7.36□□□□□ -1.23
Vcan-203ENSMUST00000109546 Ccdc191J3QQ27 883 aa7.35□□□□□ -1.23
Vcan-203ENSMUST00000109546 Tomm22Q9CPQ3 142 aa7.35□□□□□ -1.23
Vcan-203ENSMUST00000109546 Ccdc43Q9CR29 222 aaKnown RBP7.35□□□□□ -1.23
Vcan-203ENSMUST00000109546 Jakmip2D3YXK0 820 aa7.35□□□□□ -1.23
Vcan-203ENSMUST00000109546 PdiltQ9DAN1 588 aa7.35□□□□□ -1.23
Vcan-203ENSMUST00000109546 Arhgef18Q6P9R4 1021 aa7.35□□□□□ -1.23
Vcan-203ENSMUST00000109546 Gigyf2Q6Y7W8 1291 aaKnown RBP7.35□□□□□ -1.23
Vcan-203ENSMUST00000109546 Card11Q8CIS0 1159 aa7.35□□□□□ -1.23
Vcan-203ENSMUST00000109546 Cchcr1Q8K2I2 770 aa7.35□□□□□ -1.23
Vcan-203ENSMUST00000109546 Apbb1Q9QXJ1 710 aa7.35□□□□□ -1.23
Vcan-203ENSMUST00000109546 MicalclQ9D5U9 680 aa7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 Lrrcc1Q69ZB0 1026 aa7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 TxlnaQ6PAM1 554 aaKnown RBP7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 TimelessQ9R1X4 1197 aa7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 Mfap1aC0HKD8 439 aaKnown RBP7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 Mfap1bC0HKD9 439 aaKnown RBP7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 Cfap53Q9D439 514 aa7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 Sept14Q9DA97 430 aa7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 Kif16bB1AVY7 1312 aa7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 Spag9Q58A65 1321 aaKnown RBP7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 Tnnt1O88346 262 aa7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 Rec8Q8C5S7 591 aa7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 Stard8Q8K031 1019 aa7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 BlmO88700 1416 aa7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 Fyco1Q8VDC1 1437 aa7.34□□□□□ -1.23
Vcan-203ENSMUST00000109546 CenpqQ9CPQ5 267 aa7.34□□□□□ -1.24
Vcan-203ENSMUST00000109546 P3h3Q8CG70 732 aa7.33□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms