RNA–Protein interactions for RNA: ENSMUST00000108677.1

Usp43-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp43, Length 4,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43-202ENSMUST00000108677 Trim44Q9QXA7 346 aa20.24■□□□□ 0.83
Usp43-202ENSMUST00000108677 Map3k1P53349 1493 aa20.23■□□□□ 0.83
Usp43-202ENSMUST00000108677 Rock1P70335 1354 aa20.23■□□□□ 0.83
Usp43-202ENSMUST00000108677 Soga1E1U8D0 1418 aa20.23■□□□□ 0.83
Usp43-202ENSMUST00000108677 Tsen2Q6P7W5 460 aa20.23■□□□□ 0.83
Usp43-202ENSMUST00000108677 AqrQ8CFQ3 1481 aaKnown RBP20.23■□□□□ 0.83
Usp43-202ENSMUST00000108677 Pde4cQ3UEI1 686 aa20.21■□□□□ 0.83
Usp43-202ENSMUST00000108677 Arhgap31A6X8Z5 1425 aa20.21■□□□□ 0.83
Usp43-202ENSMUST00000108677 Tiam1Q60610 1591 aa20.21■□□□□ 0.83
Usp43-202ENSMUST00000108677 Gm7298A0A0N4SVU1 1476 aa20.21■□□□□ 0.83
Usp43-202ENSMUST00000108677 Map3k5O35099 1380 aa20.2■□□□□ 0.82
Usp43-202ENSMUST00000108677 Psme1P97371 249 aa20.2■□□□□ 0.82
Usp43-202ENSMUST00000108677 Cux1P53564 1515 aa20.19■□□□□ 0.82
Usp43-202ENSMUST00000108677 Mfap1aC0HKD8 439 aaKnown RBP20.18■□□□□ 0.82
Usp43-202ENSMUST00000108677 Mfap1bC0HKD9 439 aaKnown RBP20.18■□□□□ 0.82
Usp43-202ENSMUST00000108677 CadpsQ80TJ1 1355 aa20.18■□□□□ 0.82
Usp43-202ENSMUST00000108677 Mink1Q9JM52 1308 aa20.17■□□□□ 0.82
Usp43-202ENSMUST00000108677 Tnnt1O88346 262 aa20.17■□□□□ 0.82
Usp43-202ENSMUST00000108677 Hsp90b1P08113 802 aaKnown RBP20.16■□□□□ 0.82
Usp43-202ENSMUST00000108677 PtmaP26350 111 aa20.16■□□□□ 0.82
Usp43-202ENSMUST00000108677 GorabQ8BRM2 368 aa20.16■□□□□ 0.82
Usp43-202ENSMUST00000108677 Shq1Q7TMX5 569 aa20.15■□□□□ 0.82
Usp43-202ENSMUST00000108677 KnstrnQ9D9Z1 312 aaKnown RBP20.15■□□□□ 0.82
Usp43-202ENSMUST00000108677 PnisrA2AJT4 805 aaKnown RBP20.15■□□□□ 0.82
Usp43-202ENSMUST00000108677 Ipo8Q7TMY7 1010 aa20.15■□□□□ 0.82
Usp43-202ENSMUST00000108677 Kcnh8P59111 1102 aa20.14■□□□□ 0.81
Usp43-202ENSMUST00000108677 EprsQ8CGC7 1512 aaKnown RBP20.13■□□□□ 0.81
Usp43-202ENSMUST00000108677 Rtf1A2AQ19 715 aaKnown RBP20.12■□□□□ 0.81
Usp43-202ENSMUST00000108677 Pak3Q61036 559 aa20.12■□□□□ 0.81
Usp43-202ENSMUST00000108677 Chmp4bQ9D8B3 224 aaKnown RBP20.12■□□□□ 0.81
Usp43-202ENSMUST00000108677 GsdmaQ9EST1 446 aa20.11■□□□□ 0.81
Usp43-202ENSMUST00000108677 Polr1aO35134 1717 aaKnown RBP20.11■□□□□ 0.81
Usp43-202ENSMUST00000108677 Ccar1Q8CH18 1146 aaKnown RBP20.1■□□□□ 0.81
Usp43-202ENSMUST00000108677 Lmod3E9QA62 571 aa20.1■□□□□ 0.81
Usp43-202ENSMUST00000108677 Stard8Q8K031 1019 aa20.09■□□□□ 0.81
Usp43-202ENSMUST00000108677 Camsap1A2AHC3 1581 aa20.09■□□□□ 0.81
Usp43-202ENSMUST00000108677 Ccdc60Q8C4J0 545 aa20.09■□□□□ 0.81
Usp43-202ENSMUST00000108677 CenpjQ569L8 1344 aa20.08■□□□□ 0.81
Usp43-202ENSMUST00000108677 Ncoa2Q61026 1462 aa20.08■□□□□ 0.8
Usp43-202ENSMUST00000108677 Zfp444Q3TDV8 331 aaKnown RBP20.08■□□□□ 0.8
Usp43-202ENSMUST00000108677 Irx3P81067 507 aa20.07■□□□□ 0.8
Usp43-202ENSMUST00000108677 Q3TQI7 289 aaKnown RBP20.07■□□□□ 0.8
Usp43-202ENSMUST00000108677 Ccdc30Q8BVF4 654 aa20.07■□□□□ 0.8
Usp43-202ENSMUST00000108677 Plb1Q3TTY0 1478 aa20.06■□□□□ 0.8
Usp43-202ENSMUST00000108677 Cd109Q8R422 1442 aa20.04■□□□□ 0.8
Usp43-202ENSMUST00000108677 Puf60Q3UEB3 564 aaKnown RBP20.03■□□□□ 0.8
Usp43-202ENSMUST00000108677 Pank1Q8K4K6 548 aa20.03■□□□□ 0.8
Usp43-202ENSMUST00000108677 Naip2Q9QUK4 1447 aa20.03■□□□□ 0.8
Usp43-202ENSMUST00000108677 ErbinQ80TH2 1402 aa20.02■□□□□ 0.8
Usp43-202ENSMUST00000108677 Wdr62Q3U3T8 1523 aa20.02■□□□□ 0.8
Usp43-202ENSMUST00000108677 HnrnpuQ8VEK3 800 aaKnown RBP20.02■□□□□ 0.8
Usp43-202ENSMUST00000108677 Pcf11G3X9Z4 1553 aa20.02■□□□□ 0.8
Usp43-202ENSMUST00000108677 A2mQ6GQT1 1474 aa20.01■□□□□ 0.79
Usp43-202ENSMUST00000108677 Ccdc146E9Q9F7 977 aa20■□□□□ 0.79
Usp43-202ENSMUST00000108677 Ralbp1Q62172 648 aa19.99■□□□□ 0.79
Usp43-202ENSMUST00000108677 Dnttip2Q8R2M2 758 aaKnown RBP19.99■□□□□ 0.79
Usp43-202ENSMUST00000108677 Eif2s2Q99L45 331 aaKnown RBP19.99■□□□□ 0.79
Usp43-202ENSMUST00000108677 Sart3Q9JLI8 962 aaKnown RBP19.99■□□□□ 0.79
Usp43-202ENSMUST00000108677 Ppp2r1aQ76MZ3 589 aa19.98■□□□□ 0.79
Usp43-202ENSMUST00000108677 Fam163aQ8CAA5 168 aa19.98■□□□□ 0.79
Usp43-202ENSMUST00000108677 Myom3A2ABU4 1439 aa19.97■□□□□ 0.79
Usp43-202ENSMUST00000108677 Cc2d1aQ8K1A6 943 aa19.97■□□□□ 0.79
Usp43-202ENSMUST00000108677 Prdm16A2A935 1275 aa19.96■□□□□ 0.79
Usp43-202ENSMUST00000108677 Apaf1O88879 1249 aa19.96■□□□□ 0.79
Usp43-202ENSMUST00000108677 Nsd2Q8BVE8 1365 aa19.96■□□□□ 0.79
Usp43-202ENSMUST00000108677 Ak7Q9D2H2 614 aa19.96■□□□□ 0.79
Usp43-202ENSMUST00000108677 Q9D9H8 365 aa19.95■□□□□ 0.78
Usp43-202ENSMUST00000108677 Ttll13A4Q9F6 804 aa19.95■□□□□ 0.78
Usp43-202ENSMUST00000108677 Pabpn1Q8CCS6 302 aaKnown RBP19.95■□□□□ 0.78
Usp43-202ENSMUST00000108677 Mrc2Q64449 1479 aa19.95■□□□□ 0.78
Usp43-202ENSMUST00000108677 Abcc5Q9R1X5 1436 aa19.95■□□□□ 0.78
Usp43-202ENSMUST00000108677 Kif16bB1AVY7 1312 aa19.95■□□□□ 0.78
Usp43-202ENSMUST00000108677 Nectin2P32507 530 aa19.94■□□□□ 0.78
Usp43-202ENSMUST00000108677 G3bp1P97855 465 aaKnown RBP19.94■□□□□ 0.78
Usp43-202ENSMUST00000108677 Cabp4Q8VHC5 271 aa19.94■□□□□ 0.78
Usp43-202ENSMUST00000108677 Zfp777B9EKF4 885 aa19.94■□□□□ 0.78
Usp43-202ENSMUST00000108677 Nutm1Q8BHP2 1126 aa19.94■□□□□ 0.78
Usp43-202ENSMUST00000108677 Dnajc5bQ9CQ94 199 aa19.93■□□□□ 0.78
Usp43-202ENSMUST00000108677 Plekhg5Q66T02 1073 aa19.92■□□□□ 0.78
Usp43-202ENSMUST00000108677 Arhgap5P97393 1501 aa19.92■□□□□ 0.78
Usp43-202ENSMUST00000108677 3425401B19RikD3Z1D3 1412 aa19.92■□□□□ 0.78
Usp43-202ENSMUST00000108677 NexmifQ5DTT1 1515 aa19.92■□□□□ 0.78
Usp43-202ENSMUST00000108677 Mug1P28665 1476 aa19.91■□□□□ 0.78
Usp43-202ENSMUST00000108677 L3mbtl2P59178 703 aa19.91■□□□□ 0.78
Usp43-202ENSMUST00000108677 KarsQ99MN1 595 aaKnown RBP19.91■□□□□ 0.78
Usp43-202ENSMUST00000108677 Prkrip1Q9CWV6 186 aaKnown RBP19.91■□□□□ 0.78
Usp43-202ENSMUST00000108677 Trim58Q5NCC9 485 aa19.91■□□□□ 0.78
Usp43-202ENSMUST00000108677 Stk31Q99MW1 1018 aa19.91■□□□□ 0.78
Usp43-202ENSMUST00000108677 Il16O54824 1322 aa19.9■□□□□ 0.78
Usp43-202ENSMUST00000108677 Casc1Q6TDU8 730 aa19.9■□□□□ 0.78
Usp43-202ENSMUST00000108677 Lamc3Q9R0B6 1581 aa19.89■□□□□ 0.78
Usp43-202ENSMUST00000108677 Washc2Q6PGL7 1334 aa19.89■□□□□ 0.77
Usp43-202ENSMUST00000108677 Pes1Q9EQ61 584 aaKnown RBP19.89■□□□□ 0.77
Usp43-202ENSMUST00000108677 Sall3Q62255 1320 aa19.89■□□□□ 0.77
Usp43-202ENSMUST00000108677 Atp2b2Q9R0K7 1198 aa19.88■□□□□ 0.77
Usp43-202ENSMUST00000108677 Fgd6Q69ZL1 1399 aa19.86■□□□□ 0.77
Usp43-202ENSMUST00000108677 MlecQ6ZQI3 291 aaKnown RBP19.86■□□□□ 0.77
Usp43-202ENSMUST00000108677 Clstn1Q9EPL2 979 aa19.86■□□□□ 0.77
Usp43-202ENSMUST00000108677 Slx4Q6P1D7 1565 aa19.85■□□□□ 0.77
Usp43-202ENSMUST00000108677 TchhA0A0B4J1F9 1599 aa19.85■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms