RNA–Protein interactions for RNA: ENSMUST00000090134.11

Pdlim5-203, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-203ENSMUST00000090134 Ccer2J3QPU5 274 aa10.68□□□□□ -0.7
Pdlim5-203ENSMUST00000090134 Mfap1aC0HKD8 439 aaKnown RBP10.67□□□□□ -0.7
Pdlim5-203ENSMUST00000090134 Mfap1bC0HKD9 439 aaKnown RBP10.67□□□□□ -0.7
Pdlim5-203ENSMUST00000090134 Tmed8Q3UHI4 326 aa10.67□□□□□ -0.7
Pdlim5-203ENSMUST00000090134 Rsph6aQ8CDR2 708 aa10.67□□□□□ -0.7
Pdlim5-203ENSMUST00000090134 Fhod3Q76LL6 1578 aa10.66□□□□□ -0.7
Pdlim5-203ENSMUST00000090134 Wwc1Q5SXA9 1104 aa10.66□□□□□ -0.7
Pdlim5-203ENSMUST00000090134 Kif27Q7M6Z4 1394 aa10.65□□□□□ -0.7
Pdlim5-203ENSMUST00000090134 A2mQ6GQT1 1474 aa10.64□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 UacaQ8CGB3 1411 aa10.64□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 PxdnQ3UQ28 1475 aa10.64□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 VaspP70460 375 aaKnown RBP10.64□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Lmod2Q3UHZ5 550 aa10.64□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Lrriq1Q0P5X1 1673 aa10.63□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 NexmifQ5DTT1 1515 aa10.63□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Trim26Q99PN3 545 aa10.63□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Cc2d2bA0A286YDU8 1405 aa10.63□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Cul7Q8VE73 1689 aa10.62□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 BC005561E9Q5E2 1589 aa10.62□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Ccnb3Q810T2 1396 aa10.62□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Rapgef6Q5NCJ1 1609 aa10.61□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Dhx30Q99PU8 1217 aaKnown RBP10.61□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Rfx7F8VPJ6 1459 aa10.61□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Zc3h15Q3TIV5 426 aaKnown RBP10.6□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Slc24a1Q91WD8 1130 aa10.6□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Camsap2Q8C1B1 1461 aa10.59□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Abcc2Q8VI47 1543 aa10.59□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Sh3bp1P55194 680 aa10.59□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Stard8Q8K031 1019 aa10.59□□□□□ -0.71
Pdlim5-203ENSMUST00000090134 Mak16Q8BGS0 296 aaKnown RBP10.58□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Dennd4bQ3U1Y4 1499 aa10.58□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Neurod1Q60867 357 aa10.58□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Ppp6r1Q7TSI3 856 aa10.57□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Shroom2A2ALU4 1481 aa10.57□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Mug1P28665 1476 aa10.56□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Arhgef11Q68FM7 1552 aa10.56□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 WrnO09053 1401 aa10.55□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Tcf3P15806 651 aa10.55□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Cdc42bpaQ3UU96 1719 aa10.55□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Eid3Q3V124 375 aa10.55□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Kiaa1551Q5DTW7 1521 aa10.55□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Rusc2Q80U22 1514 aa10.55□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 BbxQ8VBW5 907 aa10.55□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Setbp1Q9Z180 1582 aa10.55□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Map3k4O08648 1597 aa10.55□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Ccdc9Q8VC31 543 aaKnown RBP10.54□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Zfp777B9EKF4 885 aa10.53□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Ncoa2Q61026 1462 aa10.52□□□□□ -0.72
Pdlim5-203ENSMUST00000090134 Ncoa3O09000 1398 aa10.52□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Clstn1Q9EPL2 979 aa10.52□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Eif4g3Q80XI3 1579 aaKnown RBP10.51□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Sparcl1P70663 650 aa10.51□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Dhx57Q6P5D3 1388 aaKnown RBP10.51□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Plekhh2Q8C115 1491 aa10.5□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Lamc1P02468 1607 aaKnown RBP10.5□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Fam43bA2AM80 330 aa10.5□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Secisbp2lQ6A098 1086 aaKnown RBP10.5□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Rbm10Q99KG3 930 aaKnown RBP10.5□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Dnmt1P13864 1620 aaKnown RBP10.49□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Adcy10Q8C0T9 1614 aa10.49□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Lmod3E9QA62 571 aa10.49□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Nop58Q6DFW4 536 aaKnown RBP10.49□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Ppp1r18Q8BQ30 594 aa10.49□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Anks4bQ8K3X6 423 aa10.49□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Mapkbp1Q6NS57 1503 aa10.49□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Naip5Q9R016 1403 aa10.48□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Abcc5Q9R1X5 1436 aa10.48□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Kif21bQ9QXL1 1668 aa10.48□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 SetQ9EQU5 289 aaKnown RBP10.48□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Ccdc141E9Q8Q6 1531 aa10.48□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Arhgef40Q3UPH7 1517 aa10.47□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Zcchc11B2RX14 1644 aaKnown RBP10.47□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Rrbp1Q99PL5 1605 aaKnown RBP10.47□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Magi1Q6RHR9 1471 aa10.47□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Kdm3bQ6ZPY7 1562 aa10.47□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Mroh2aD3Z750 1679 aa10.46□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Arhgap31A6X8Z5 1425 aa10.46□□□□□ -0.73
Pdlim5-203ENSMUST00000090134 Kdm6bQ5NCY0 1641 aa10.46□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Il16O54824 1322 aa10.46□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Prr29B1ARI9 187 aa10.45□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Fbln2P37889 1221 aa10.45□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 P3h3Q8CG70 732 aa10.45□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Kcnn1Q9EQR3 537 aa10.45□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Arhgap27A2AB59 869 aa10.44□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 BcanQ61361 883 aa10.44□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Mtmr7Q9Z2C9 660 aa10.44□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Znf703P0CL69 594 aa10.44□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Hspa5P20029 655 aaKnown RBP10.44□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Cacnb1Q8R3Z5 597 aa10.44□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Mlh3A0A1Y7VMP7 1443 aa10.44□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 SphkapQ6NSW3 1687 aa10.43□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Caskin1Q6P9K8 1431 aa10.43□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Mtus2Q3UHD3 1353 aa10.42□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 MccE9PWI3 1003 aa10.42□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Zbtb22Q9Z0G7 638 aa10.42□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Arhgef12Q8R4H2 1543 aaKnown RBP10.42□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 MafgO54790 162 aa10.41□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Ankrd13aQ80UP5 588 aa10.41□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Chic2Q9D9G3 165 aa10.41□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Prex2Q3LAC4 1598 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 132.8 ms