RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Ifit1bl1D3Z6F0 470 aa19.3■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Rufy1Q8BIJ7 712 aa19.3■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Rfx1P48377 963 aa19.3■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Birc3O08863 600 aa19.29■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Dcaf11Q91VU6 549 aa19.29■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Rsph6aQ8CDR2 708 aa19.29■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Ccdc146E9Q9F7 977 aa19.29■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Tpm1P58771 284 aa19.28■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Mre11Q61216 706 aa19.28■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Tpm2P58774 284 aa19.28■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Gabpb2P81069 414 aa19.28■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Ylpm1Q9R0I7 1386 aaKnown RBP19.28■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Abcc8B2RUS7 1588 aa19.27■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Anp32eP97822 260 aaKnown RBP19.27■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Sh3bgrQ9WUZ7 214 aa19.27■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Chmp3Q9CQ10 224 aa19.27■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Chaf1aQ9QWF0 911 aa19.27■□□□□ 0.68
Ubr3-201ENSMUST00000055758 St18Q80TY4 1045 aa19.27■□□□□ 0.67
Ubr3-201ENSMUST00000055758 Filip1lQ6P6L0 1131 aa19.26■□□□□ 0.67
Ubr3-201ENSMUST00000055758 Pkd2O35245 966 aa19.26■□□□□ 0.67
Ubr3-201ENSMUST00000055758 Paf1Q8K2T8 535 aa19.26■□□□□ 0.67
Ubr3-201ENSMUST00000055758 Kri1Q8VDQ9 704 aaKnown RBP19.26■□□□□ 0.67
Ubr3-201ENSMUST00000055758 A0A0U1RNP2 1173 aa19.26■□□□□ 0.67
Ubr3-201ENSMUST00000055758 Casq1O09165 405 aa19.24■□□□□ 0.67
Ubr3-201ENSMUST00000055758 Nap1l3Q794H2 544 aa19.24■□□□□ 0.67
Ubr3-201ENSMUST00000055758 Gtf2e1Q9D0D5 440 aa19.23■□□□□ 0.67
Ubr3-201ENSMUST00000055758 Dixdc1Q80Y83 711 aa19.23■□□□□ 0.67
Ubr3-201ENSMUST00000055758 Fam13bQ8K2H3 851 aa19.22■□□□□ 0.67
Ubr3-201ENSMUST00000055758 Ralbp1Q62172 648 aa19.21■□□□□ 0.67
Ubr3-201ENSMUST00000055758 Ccar1Q8CH18 1146 aaKnown RBP19.21■□□□□ 0.67
Ubr3-201ENSMUST00000055758 Spag9Q58A65 1321 aaKnown RBP19.21■□□□□ 0.67
Ubr3-201ENSMUST00000055758 CntlnA2AM05 1397 aa19.2■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Eif2s2Q99L45 331 aaKnown RBP19.19■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Slc4a10Q5DTL9 1118 aa19.19■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Cwc15Q9JHS9 229 aaKnown RBP19.19■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Pdcl3Q8BVF2 240 aa19.18■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Krt82Q99M74 516 aa19.18■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Gm21969J3QJZ1 289 aa19.17■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Gripap1Q8VD04 806 aa19.17■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Chmp4cQ9D7F7 232 aa19.17■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Glipr1l2Q9CQ35 332 aa19.17■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Hdgfl1Q2VPR5 283 aa19.16■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Hap1O35668 628 aa19.16■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Map4P27546 1125 aaKnown RBP19.15■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Wdr78E9PYY5 807 aa19.15■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Kif4P33174 1231 aa19.15■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Dctn1O08788 1281 aa19.15■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Znhit6Q3UFB2 460 aaKnown RBP19.15■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Ccdc47Q9D024 483 aaKnown RBP19.15■□□□□ 0.66
Ubr3-201ENSMUST00000055758 Plagl1Q9JLQ4 704 aa19.14■□□□□ 0.65
Ubr3-201ENSMUST00000055758 Kif15Q6P9L6 1387 aa19.13■□□□□ 0.65
Ubr3-201ENSMUST00000055758 Golga3P55937 1487 aa19.12■□□□□ 0.65
Ubr3-201ENSMUST00000055758 Odf2A3KGV1 830 aaKnown RBP19.12■□□□□ 0.65
Ubr3-201ENSMUST00000055758 Bicd2Q921C5 820 aa19.12■□□□□ 0.65
Ubr3-201ENSMUST00000055758 Ak7Q9D2H2 614 aa19.11■□□□□ 0.65
Ubr3-201ENSMUST00000055758 Sox12Q04890 314 aa19.11■□□□□ 0.65
Ubr3-201ENSMUST00000055758 Rbm10Q99KG3 930 aaKnown RBP19.11■□□□□ 0.65
Ubr3-201ENSMUST00000055758 Gcom1E9PZ54 550 aa19.1■□□□□ 0.65
Ubr3-201ENSMUST00000055758 MyzapQ3UIJ9 466 aa19.1■□□□□ 0.65
Ubr3-201ENSMUST00000055758 Trak1Q6PD31 939 aa19.1■□□□□ 0.65
Ubr3-201ENSMUST00000055758 Rock2P70336 1388 aa19.1■□□□□ 0.65
Ubr3-201ENSMUST00000055758 Ccdc43Q9CR29 222 aaKnown RBP19.1■□□□□ 0.65
Ubr3-201ENSMUST00000055758 Cc2d1aQ8K1A6 943 aa19.08■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Ipo7Q9EPL8 1038 aaKnown RBP19.08■□□□□ 0.64
Ubr3-201ENSMUST00000055758 AppP12023 770 aa19.07■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Phactr2B1AVP0 632 aa19.07■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Cgnl1Q6AW69 1298 aa19.07■□□□□ 0.64
Ubr3-201ENSMUST00000055758 FosbP13346 338 aa19.07■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Nap1l1P28656 391 aaKnown RBP19.07■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Ccdc18Q640L5 1455 aa19.06■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Mphosph9A6H5Y1 991 aa19.06■□□□□ 0.64
Ubr3-201ENSMUST00000055758 HmmrQ00547 794 aaKnown RBP19.06■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Rnf214Q8BFU3 668 aaKnown RBP19.05■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Rec8Q8C5S7 591 aa19.04■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Ccdc60Q8C4J0 545 aa19.03■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Hnrnpul1Q8VDM6 859 aaKnown RBP19.03■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Rsf1E9PWW9 1441 aaKnown RBP19.03■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Gps2Q921N8 327 aa19.03■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Smg6P61406 1418 aaKnown RBP19.02■□□□□ 0.64
Ubr3-201ENSMUST00000055758 Sycp1Q62209 993 aa19.01■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Srek1Q8BZX4 494 aaKnown RBP19.01■□□□□ 0.63
Ubr3-201ENSMUST00000055758 KinQ8K339 391 aa19.01■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Fnbp4Q6ZQ03 1031 aa19.01■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Mad1l1Q9WTX8 717 aaKnown RBP19.01■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Nol12Q8BG17 217 aa19.01■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Cplx1P63040 134 aa19■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Hmgn5Q9JL35 406 aa19■□□□□ 0.63
Ubr3-201ENSMUST00000055758 AcrbpQ3V140 540 aa19■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Rabep1O35551 862 aa19■□□□□ 0.63
Ubr3-201ENSMUST00000055758 PogkQ80TC5 607 aa19■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Ggt6Q6PDE7 497 aa18.98■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Srcin1Q9QWI6 1250 aa18.98■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Mrvi1Q9WUX5 899 aaKnown RBP18.98■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Mns1Q61884 491 aa18.98■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Tsen2Q6P7W5 460 aa18.98■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Ripply1Q2WG77 201 aa18.98■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Hook1Q8BIL5 728 aa18.97■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Tceal9Q9DD24 104 aa18.97■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Smc3Q9CW03 1217 aaKnown RBP18.97■□□□□ 0.63
Ubr3-201ENSMUST00000055758 Rrp9Q91WM3 475 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms