RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Mtus2Q3UHD3 1353 aa10.89□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Fam43aQ8BUP8 424 aa10.88□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Trim26Q99PN3 545 aa10.88□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Naip6Q9JIB6 1403 aa10.88□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Prkrip1Q9CWV6 186 aaKnown RBP10.87□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Mbd5B1AYB6 1498 aa10.87□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Arhgef12Q8R4H2 1543 aaKnown RBP10.86□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Rock2P70336 1388 aa10.86□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Il16O54824 1322 aa10.86□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Erbb3Q61526 1339 aa10.86□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Pla2r1Q62028 1487 aa10.85□□□□□ -0.67
Cdc40-201ENSMUST00000044166 ChgaP26339 463 aaKnown RBP10.85□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Dhx9O70133 1380 aaKnown RBP10.85□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Mug2P28666 1451 aa10.85□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Rrp9Q91WM3 475 aaKnown RBP10.84□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Kif21bQ9QXL1 1668 aa10.84□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Zscan21Q07231 555 aa10.84□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Mak16Q8BGS0 296 aaKnown RBP10.84□□□□□ -0.67
Cdc40-201ENSMUST00000044166 4933402E13RikQ9D4D2 429 aa10.83□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Zfp444Q3TDV8 331 aaKnown RBP10.83□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Kdm3bQ6ZPY7 1562 aa10.83□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Arhgef40Q3UPH7 1517 aa10.82□□□□□ -0.68
Cdc40-201ENSMUST00000044166 TnikP83510 1323 aa10.82□□□□□ -0.68
Cdc40-201ENSMUST00000044166 SphkapQ6NSW3 1687 aa10.82□□□□□ -0.68
Cdc40-201ENSMUST00000044166 AU015836B2RUM3 263 aa10.82□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Rpgrip1lQ8CG73 1264 aa10.82□□□□□ -0.68
Cdc40-201ENSMUST00000044166 AlkP97793 1621 aa10.82□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Kif14L0N7N1 1674 aaKnown RBP10.82□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Dhx57Q6P5D3 1388 aaKnown RBP10.81□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Grwd1Q810D6 446 aaKnown RBP10.81□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Map3k4O08648 1597 aa10.81□□□□□ -0.68
Cdc40-201ENSMUST00000044166 DroshaQ5HZJ0 1373 aaKnown RBP10.81□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Trak1Q6PD31 939 aa10.81□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Soga1E1U8D0 1418 aa10.81□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Ttll5Q8CHB8 1328 aa10.8□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Ncoa3O09000 1398 aa10.8□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Ttll13A4Q9F6 804 aa10.8□□□□□ -0.68
Cdc40-201ENSMUST00000044166 RalgapbQ8BQZ4 1484 aa10.79□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Mbd3Q9Z2D8 285 aaKnown RBP10.79□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Kdm6bQ5NCY0 1641 aa10.79□□□□□ -0.68
Cdc40-201ENSMUST00000044166 CanxP35564 591 aaKnown RBP10.79□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Adgrb2Q8CGM1 1561 aa10.78□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Ncbp3Q8BZR9 615 aaKnown RBP10.78□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Plb1Q3TTY0 1478 aa10.78□□□□□ -0.68
Cdc40-201ENSMUST00000044166 WizO88286 1684 aaKnown RBP10.78□□□□□ -0.68
Cdc40-201ENSMUST00000044166 BbxQ8VBW5 907 aa10.78□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Magi3Q9EQJ9 1476 aa10.78□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Rad21Q61550 635 aaKnown RBP10.78□□□□□ -0.68
Cdc40-201ENSMUST00000044166 Safb2Q80YR5 991 aaKnown RBP10.77□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Wdr7Q920I9 1489 aa10.77□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Adamts12Q811B3 1600 aa10.77□□□□□ -0.69
Cdc40-201ENSMUST00000044166 WrnO09053 1401 aa10.77□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Arid4aF8VPQ2 1261 aaKnown RBP10.76□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Cpsf1Q9EPU4 1441 aaKnown RBP10.76□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Cdk13Q69ZA1 1511 aaKnown RBP10.76□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Fam135aQ6NS59 1506 aa10.76□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Adcy10Q8C0T9 1614 aa10.76□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Grin2aP35436 1464 aa10.76□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Brd2Q7JJ13 798 aaKnown RBP10.76□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Nkx1-2P42580 305 aa10.75□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Dhx30Q99PU8 1217 aaKnown RBP10.75□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Supt6hQ62383 1726 aaKnown RBP10.75□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Cers3Q1A3B0 383 aa10.75□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Q7TT23 1179 aa10.75□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Nup155Q99P88 1391 aaKnown RBP10.75□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Rapgef6Q5NCJ1 1609 aa10.74□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Polr3aB2RXC6 1390 aa10.74□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Sox12Q04890 314 aa10.74□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Asxl1P59598 1514 aa10.74□□□□□ -0.69
Cdc40-201ENSMUST00000044166 B4galnt3Q6L8S8 986 aa10.73□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Tmem132aQ922P8 1018 aa10.73□□□□□ -0.69
Cdc40-201ENSMUST00000044166 EspnQ9ET47 871 aa10.73□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Dnai1Q8C0M8 701 aa10.72□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Sart3Q9JLI8 962 aaKnown RBP10.72□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Mre11Q61216 706 aa10.72□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Zmym4A2A791 1549 aaKnown RBP10.72□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Cc2d2bA0A286YDU8 1405 aa10.72□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Tnnt2P50752 301 aa10.72□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Dusp27Q148W8 1138 aa10.71□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Skap1Q3UUV5 355 aa10.71□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Ppm1gQ61074 542 aa10.71□□□□□ -0.69
Cdc40-201ENSMUST00000044166 PxdnQ3UQ28 1475 aa10.71□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Map4P27546 1125 aaKnown RBP10.71□□□□□ -0.69
Cdc40-201ENSMUST00000044166 Ak9G3UYQ4 1894 aa10.71□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Cdc42bpaQ3UU96 1719 aa10.71□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Irx6Q9ER75 438 aa10.71□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Gapvd1Q6PAR5 1458 aa10.7□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Arid4bA2CG63 1314 aaKnown RBP10.7□□□□□ -0.7
Cdc40-201ENSMUST00000044166 NudcO35685 332 aaKnown RBP10.7□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Arhgef11Q68FM7 1552 aa10.7□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Trpm2Q91YD4 1506 aa10.69□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Rock1P70335 1354 aa10.69□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Ttc41Q692V3 1318 aa10.69□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Slc4a1apE9PX68 744 aa10.69□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Chmp5Q9D7S9 219 aa10.69□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Lmod3E9QA62 571 aa10.69□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Irf5P56477 497 aa10.69□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Rwdd1Q9CQK7 243 aa10.69□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Kdm2bQ6P1G2 1309 aa10.69□□□□□ -0.7
Cdc40-201ENSMUST00000044166 4930567H17RikQ3V0K5 233 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms