RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Slc4a3P16283 1227 aa20.18■□□□□ 0.82
Nup54-201ENSMUST00000038514 Gapvd1Q6PAR5 1458 aa20.18■□□□□ 0.82
Nup54-201ENSMUST00000038514 Kank1E9Q238 1360 aa20.18■□□□□ 0.82
Nup54-201ENSMUST00000038514 Grwd1Q810D6 446 aaKnown RBP20.17■□□□□ 0.82
Nup54-201ENSMUST00000038514 Kcnh8P59111 1102 aa20.16■□□□□ 0.82
Nup54-201ENSMUST00000038514 Kdm5cP41230 1554 aa20.15■□□□□ 0.82
Nup54-201ENSMUST00000038514 Tcerg1Q8CGF7 1100 aaKnown RBP20.14■□□□□ 0.82
Nup54-201ENSMUST00000038514 Mink1Q9JM52 1308 aa20.14■□□□□ 0.81
Nup54-201ENSMUST00000038514 Rock1P70335 1354 aa20.14■□□□□ 0.81
Nup54-201ENSMUST00000038514 PtprgQ05909 1442 aa20.14■□□□□ 0.81
Nup54-201ENSMUST00000038514 Erbb3Q61526 1339 aa20.14■□□□□ 0.81
Nup54-201ENSMUST00000038514 Map4P27546 1125 aaKnown RBP20.13■□□□□ 0.81
Nup54-201ENSMUST00000038514 Lrrc9Q8CDN9 1456 aa20.13■□□□□ 0.81
Nup54-201ENSMUST00000038514 Adgrl2Q8JZZ7 1487 aa20.13■□□□□ 0.81
Nup54-201ENSMUST00000038514 Fam208aQ69ZR9 1610 aaKnown RBP20.11■□□□□ 0.81
Nup54-201ENSMUST00000038514 Eif4g3Q80XI3 1579 aaKnown RBP20.11■□□□□ 0.81
Nup54-201ENSMUST00000038514 Tarbp1E9Q368 1579 aa20.1■□□□□ 0.81
Nup54-201ENSMUST00000038514 Rpgrip1lQ8CG73 1264 aa20.09■□□□□ 0.81
Nup54-201ENSMUST00000038514 Ipo9Q91YE6 1041 aa20.09■□□□□ 0.81
Nup54-201ENSMUST00000038514 Dnmt1P13864 1620 aaKnown RBP20.08■□□□□ 0.81
Nup54-201ENSMUST00000038514 Ssh2Q5SW75 1423 aa20.06■□□□□ 0.8
Nup54-201ENSMUST00000038514 Lrriq1Q0P5X1 1673 aa20.06■□□□□ 0.8
Nup54-201ENSMUST00000038514 Mast1Q9R1L5 1570 aa20.05■□□□□ 0.8
Nup54-201ENSMUST00000038514 Zfp444Q3TDV8 331 aaKnown RBP20.05■□□□□ 0.8
Nup54-201ENSMUST00000038514 Zmym4A2A791 1549 aaKnown RBP20.05■□□□□ 0.8
Nup54-201ENSMUST00000038514 Rrbp1Q99PL5 1605 aaKnown RBP20.04■□□□□ 0.8
Nup54-201ENSMUST00000038514 Gm32742A0A1B0GT42 1604 aa20.04■□□□□ 0.8
Nup54-201ENSMUST00000038514 Ttbk1Q6PCN3 1308 aa20.03■□□□□ 0.8
Nup54-201ENSMUST00000038514 Fancd2Q80V62 1450 aa20.02■□□□□ 0.8
Nup54-201ENSMUST00000038514 Plch2A2AP18 1501 aa20.02■□□□□ 0.8
Nup54-201ENSMUST00000038514 Zscan21Q07231 555 aa20.02■□□□□ 0.8
Nup54-201ENSMUST00000038514 Ccdc27Q3V036 639 aa20.02■□□□□ 0.8
Nup54-201ENSMUST00000038514 Mak16Q8BGS0 296 aaKnown RBP20.01■□□□□ 0.79
Nup54-201ENSMUST00000038514 Dnajc5bQ9CQ94 199 aa20■□□□□ 0.79
Nup54-201ENSMUST00000038514 Atp7aQ64430 1491 aa20■□□□□ 0.79
Nup54-201ENSMUST00000038514 Upf2A2AT37 1269 aaKnown RBP20■□□□□ 0.79
Nup54-201ENSMUST00000038514 Anp32bQ9EST5 272 aaKnown RBP19.98■□□□□ 0.79
Nup54-201ENSMUST00000038514 TnikP83510 1323 aa19.98■□□□□ 0.79
Nup54-201ENSMUST00000038514 Q7TT23 1179 aa19.98■□□□□ 0.79
Nup54-201ENSMUST00000038514 Neurl4Q5NCX5 1563 aa19.97■□□□□ 0.79
Nup54-201ENSMUST00000038514 Cd109Q8R422 1442 aa19.97■□□□□ 0.79
Nup54-201ENSMUST00000038514 Prkrip1Q9CWV6 186 aaKnown RBP19.97■□□□□ 0.79
Nup54-201ENSMUST00000038514 Rnf17Q99MV7 1640 aa19.97■□□□□ 0.79
Nup54-201ENSMUST00000038514 Neo1P97798 1493 aa19.96■□□□□ 0.79
Nup54-201ENSMUST00000038514 Ppip5k1A2ARP1 1436 aa19.96■□□□□ 0.79
Nup54-201ENSMUST00000038514 Ak9G3UYQ4 1894 aa19.96■□□□□ 0.79
Nup54-201ENSMUST00000038514 Pdcd11Q6NS46 1862 aaKnown RBP19.96■□□□□ 0.79
Nup54-201ENSMUST00000038514 Rusc2Q80U22 1514 aa19.96■□□□□ 0.79
Nup54-201ENSMUST00000038514 Clstn2Q9ER65 966 aa19.95■□□□□ 0.78
Nup54-201ENSMUST00000038514 Adamts13Q769J6 1426 aa19.94■□□□□ 0.78
Nup54-201ENSMUST00000038514 Arhgap5P97393 1501 aa19.93■□□□□ 0.78
Nup54-201ENSMUST00000038514 PrxO55103 1391 aa19.93■□□□□ 0.78
Nup54-201ENSMUST00000038514 Tex14Q7M6U3 1450 aa19.93■□□□□ 0.78
Nup54-201ENSMUST00000038514 Jph4Q80WT0 628 aa19.92■□□□□ 0.78
Nup54-201ENSMUST00000038514 Hecw1Q8K4P8 1604 aa19.92■□□□□ 0.78
Nup54-201ENSMUST00000038514 Trappc8E9PWG2 1437 aa19.91■□□□□ 0.78
Nup54-201ENSMUST00000038514 Rrp7aQ9D1C9 280 aaKnown RBP19.9■□□□□ 0.78
Nup54-201ENSMUST00000038514 NeflP08551 543 aa19.89■□□□□ 0.77
Nup54-201ENSMUST00000038514 Pank3Q8R2W9 370 aa19.89■□□□□ 0.77
Nup54-201ENSMUST00000038514 Cfap74Q3UY96 1578 aa19.89■□□□□ 0.77
Nup54-201ENSMUST00000038514 Cep170Q6A065 1588 aa19.88■□□□□ 0.77
Nup54-201ENSMUST00000038514 Clasp1Q80TV8 1535 aaKnown RBP19.88■□□□□ 0.77
Nup54-201ENSMUST00000038514 Zbtb4Q5F293 982 aa19.87■□□□□ 0.77
Nup54-201ENSMUST00000038514 Ttc41Q692V3 1318 aa19.87■□□□□ 0.77
Nup54-201ENSMUST00000038514 Robo2Q7TPD3 1470 aa19.87■□□□□ 0.77
Nup54-201ENSMUST00000038514 Rad21Q61550 635 aaKnown RBP19.86■□□□□ 0.77
Nup54-201ENSMUST00000038514 Fkbp15Q6P9Q6 1216 aaKnown RBP19.86■□□□□ 0.77
Nup54-201ENSMUST00000038514 Zbtb7cQ8VCZ7 619 aa19.86■□□□□ 0.77
Nup54-201ENSMUST00000038514 Arid4bA2CG63 1314 aaKnown RBP19.86■□□□□ 0.77
Nup54-201ENSMUST00000038514 Cdc42bpbQ7TT50 1713 aa19.85■□□□□ 0.77
Nup54-201ENSMUST00000038514 Inpp5dQ9ES52 1191 aa19.85■□□□□ 0.77
Nup54-201ENSMUST00000038514 Ifit1bl1D3Z6F0 470 aa19.84■□□□□ 0.77
Nup54-201ENSMUST00000038514 Sbno1Q689Z5 1390 aa19.84■□□□□ 0.77
Nup54-201ENSMUST00000038514 Zscan10Q3URR7 782 aa19.83■□□□□ 0.77
Nup54-201ENSMUST00000038514 PrkcshO08795 521 aa19.82■□□□□ 0.76
Nup54-201ENSMUST00000038514 Tulp4Q9JIL5 1547 aa19.82■□□□□ 0.76
Nup54-201ENSMUST00000038514 Sart1Q9Z315 806 aaKnown RBP19.81■□□□□ 0.76
Nup54-201ENSMUST00000038514 Abcc3B2RX12 1523 aa19.8■□□□□ 0.76
Nup54-201ENSMUST00000038514 Pola1P33609 1465 aa19.8■□□□□ 0.76
Nup54-201ENSMUST00000038514 Kif16bB1AVY7 1312 aa19.8■□□□□ 0.76
Nup54-201ENSMUST00000038514 Kiaa1210E9Q0C6 1637 aa19.79■□□□□ 0.76
Nup54-201ENSMUST00000038514 Gm16486A0A1D5RMD1 1434 aa19.79■□□□□ 0.76
Nup54-201ENSMUST00000038514 Edc4Q3UJB9 1406 aaKnown RBP19.79■□□□□ 0.76
Nup54-201ENSMUST00000038514 Iqcf3Q9D498 203 aa19.79■□□□□ 0.76
Nup54-201ENSMUST00000038514 AI481877A2ALV5 1481 aa19.79■□□□□ 0.76
Nup54-201ENSMUST00000038514 Mbd3Q9Z2D8 285 aaKnown RBP19.78■□□□□ 0.76
Nup54-201ENSMUST00000038514 Ttll13A4Q9F6 804 aa19.78■□□□□ 0.76
Nup54-201ENSMUST00000038514 Tmf1B9EKI3 1091 aa19.78■□□□□ 0.76
Nup54-201ENSMUST00000038514 NhsB1AV60 1647 aa19.76■□□□□ 0.75
Nup54-201ENSMUST00000038514 Esx1O88933 382 aa19.76■□□□□ 0.75
Nup54-201ENSMUST00000038514 ChgaP26339 463 aaKnown RBP19.76■□□□□ 0.75
Nup54-201ENSMUST00000038514 Kif1bQ60575 1816 aaKnown RBP19.75■□□□□ 0.75
Nup54-201ENSMUST00000038514 ShprhQ7TPQ3 1674 aa19.75■□□□□ 0.75
Nup54-201ENSMUST00000038514 Abca17E9PX95 1733 aa19.75■□□□□ 0.75
Nup54-201ENSMUST00000038514 AknaQ80VW7 1404 aa19.75■□□□□ 0.75
Nup54-201ENSMUST00000038514 Spag9Q58A65 1321 aaKnown RBP19.74■□□□□ 0.75
Nup54-201ENSMUST00000038514 Ppp2r1aQ76MZ3 589 aa19.74■□□□□ 0.75
Nup54-201ENSMUST00000038514 Kdm2bQ6P1G2 1309 aa19.74■□□□□ 0.75
Nup54-201ENSMUST00000038514 Itsn2Q9Z0R6 1659 aa19.74■□□□□ 0.75
Nup54-201ENSMUST00000038514 Hsp90aa1P07901 733 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms