RNA–Protein interactions for RNA: ENSMUST00000026072.3

Trub1-201, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

TSL 1 (best) BASIC

Gene Trub1, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-201ENSMUST00000026072 Zfp644E9QA22 1323 aa10.31□□□□□ -0.76
Trub1-201ENSMUST00000026072 Ccdc146E9Q9F7 977 aa10.3□□□□□ -0.76
Trub1-201ENSMUST00000026072 Inpp5dQ9ES52 1191 aa10.3□□□□□ -0.76
Trub1-201ENSMUST00000026072 SlkO54988 1233 aa10.3□□□□□ -0.76
Trub1-201ENSMUST00000026072 Shroom4Q1W617 1475 aa10.3□□□□□ -0.76
Trub1-201ENSMUST00000026072 Tsen2Q6P7W5 460 aa10.29□□□□□ -0.76
Trub1-201ENSMUST00000026072 Arap1Q4LDD4 1452 aa10.29□□□□□ -0.76
Trub1-201ENSMUST00000026072 Chmp3Q9CQ10 224 aa10.28□□□□□ -0.76
Trub1-201ENSMUST00000026072 Esx1O88933 382 aa10.28□□□□□ -0.76
Trub1-201ENSMUST00000026072 Cc2d1aQ8K1A6 943 aa10.28□□□□□ -0.76
Trub1-201ENSMUST00000026072 Naip1Q9QWK5 1403 aa10.28□□□□□ -0.76
Trub1-201ENSMUST00000026072 Usp47Q8BY87 1376 aa10.27□□□□□ -0.76
Trub1-201ENSMUST00000026072 Spag9Q58A65 1321 aaKnown RBP10.27□□□□□ -0.77
Trub1-201ENSMUST00000026072 Nol10Q5RJG1 687 aaKnown RBP10.27□□□□□ -0.77
Trub1-201ENSMUST00000026072 Ccar1Q8CH18 1146 aaKnown RBP10.27□□□□□ -0.77
Trub1-201ENSMUST00000026072 Adam1bQ8R534 806 aa10.27□□□□□ -0.77
Trub1-201ENSMUST00000026072 Ccdc60Q8C4J0 545 aa10.26□□□□□ -0.77
Trub1-201ENSMUST00000026072 Mical1Q8VDP3 1048 aa10.26□□□□□ -0.77
Trub1-201ENSMUST00000026072 Frmpd1A2AKB4 1549 aa10.26□□□□□ -0.77
Trub1-201ENSMUST00000026072 Efcab5A0JP43 1406 aa10.26□□□□□ -0.77
Trub1-201ENSMUST00000026072 Plekhh2Q8C115 1491 aa10.25□□□□□ -0.77
Trub1-201ENSMUST00000026072 Gpatch11Q3UFS4 262 aa10.25□□□□□ -0.77
Trub1-201ENSMUST00000026072 Tdrd9Q14BI7 1383 aa10.25□□□□□ -0.77
Trub1-201ENSMUST00000026072 MlecQ6ZQI3 291 aaKnown RBP10.25□□□□□ -0.77
Trub1-201ENSMUST00000026072 PtmsQ9D0J8 101 aaKnown RBP10.25□□□□□ -0.77
Trub1-201ENSMUST00000026072 Gm973E9Q295 1059 aa10.24□□□□□ -0.77
Trub1-201ENSMUST00000026072 MsnP26041 577 aaKnown RBP10.24□□□□□ -0.77
Trub1-201ENSMUST00000026072 Cabp4Q8VHC5 271 aa10.24□□□□□ -0.77
Trub1-201ENSMUST00000026072 Smg6P61406 1418 aaKnown RBP10.23□□□□□ -0.77
Trub1-201ENSMUST00000026072 Slc4a10Q5DTL9 1118 aa10.23□□□□□ -0.77
Trub1-201ENSMUST00000026072 Taok2Q6ZQ29 1240 aa10.23□□□□□ -0.77
Trub1-201ENSMUST00000026072 Duox2A2AQ99 1517 aa10.23□□□□□ -0.77
Trub1-201ENSMUST00000026072 Pde3bQ61409 1100 aa10.23□□□□□ -0.77
Trub1-201ENSMUST00000026072 Rfx1P48377 963 aa10.21□□□□□ -0.78
Trub1-201ENSMUST00000026072 Eif4g2Q62448 906 aaKnown RBP10.21□□□□□ -0.78
Trub1-201ENSMUST00000026072 Usp40Q8BWR4 1235 aa10.21□□□□□ -0.78
Trub1-201ENSMUST00000026072 Stk31Q99MW1 1018 aa10.21□□□□□ -0.78
Trub1-201ENSMUST00000026072 Mink1Q9JM52 1308 aa10.2□□□□□ -0.78
Trub1-201ENSMUST00000026072 UacaQ8CGB3 1411 aa10.2□□□□□ -0.78
Trub1-201ENSMUST00000026072 Ncapd3Q6ZQK0 1506 aa10.2□□□□□ -0.78
Trub1-201ENSMUST00000026072 Kif7B7ZNG0 1348 aa10.2□□□□□ -0.78
Trub1-201ENSMUST00000026072 HdgfP51859 237 aaKnown RBP10.2□□□□□ -0.78
Trub1-201ENSMUST00000026072 Fam184bQ0KK56 942 aa10.2□□□□□ -0.78
Trub1-201ENSMUST00000026072 Tnnt2P50752 301 aa10.19□□□□□ -0.78
Trub1-201ENSMUST00000026072 Pak3Q61036 559 aa10.19□□□□□ -0.78
Trub1-201ENSMUST00000026072 Eif2s2Q99L45 331 aaKnown RBP10.19□□□□□ -0.78
Trub1-201ENSMUST00000026072 GsdmaQ9EST1 446 aa10.19□□□□□ -0.78
Trub1-201ENSMUST00000026072 Grin2bQ01097 1482 aa10.19□□□□□ -0.78
Trub1-201ENSMUST00000026072 NrkQ9R0G8 1455 aa10.19□□□□□ -0.78
Trub1-201ENSMUST00000026072 Shq1Q7TMX5 569 aa10.19□□□□□ -0.78
Trub1-201ENSMUST00000026072 Jph4Q80WT0 628 aa10.19□□□□□ -0.78
Trub1-201ENSMUST00000026072 Rock1P70335 1354 aa10.19□□□□□ -0.78
Trub1-201ENSMUST00000026072 G3bp1P97855 465 aaKnown RBP10.19□□□□□ -0.78
Trub1-201ENSMUST00000026072 Chmp4cQ9D7F7 232 aa10.18□□□□□ -0.78
Trub1-201ENSMUST00000026072 Ap3b2Q9JME5 1082 aa10.18□□□□□ -0.78
Trub1-201ENSMUST00000026072 Cc2d2bA0A286YDU8 1405 aa10.18□□□□□ -0.78
Trub1-201ENSMUST00000026072 R3hcc1Q8BSI6 488 aa10.17□□□□□ -0.78
Trub1-201ENSMUST00000026072 Ccer1Q9CQL2 403 aa10.17□□□□□ -0.78
Trub1-201ENSMUST00000026072 Top2bQ64511 1612 aa10.17□□□□□ -0.78
Trub1-201ENSMUST00000026072 CenpjQ569L8 1344 aa10.17□□□□□ -0.78
Trub1-201ENSMUST00000026072 Mroh2bQ7M6Y6 1581 aa10.17□□□□□ -0.78
Trub1-201ENSMUST00000026072 Kiaa0754Q69ZZ9 979 aa10.17□□□□□ -0.78
Trub1-201ENSMUST00000026072 Zscan10Q3URR7 782 aa10.17□□□□□ -0.78
Trub1-201ENSMUST00000026072 Rpgrip1lQ8CG73 1264 aa10.16□□□□□ -0.78
Trub1-201ENSMUST00000026072 Dhx57Q6P5D3 1388 aaKnown RBP10.16□□□□□ -0.78
Trub1-201ENSMUST00000026072 PogzQ8BZH4 1409 aaKnown RBP10.16□□□□□ -0.78
Trub1-201ENSMUST00000026072 Ak7Q9D2H2 614 aa10.16□□□□□ -0.78
Trub1-201ENSMUST00000026072 Tpm3-rs7D3Z2H9 248 aa10.15□□□□□ -0.78
Trub1-201ENSMUST00000026072 Triml2E9PW10 424 aa10.15□□□□□ -0.78
Trub1-201ENSMUST00000026072 Urb2E9Q7L1 1524 aaKnown RBP10.15□□□□□ -0.78
Trub1-201ENSMUST00000026072 Stard8Q8K031 1019 aa10.15□□□□□ -0.78
Trub1-201ENSMUST00000026072 Arhgef5E9Q7D5 1581 aa10.15□□□□□ -0.79
Trub1-201ENSMUST00000026072 Samd1D3YXK1 519 aa10.15□□□□□ -0.79
Trub1-201ENSMUST00000026072 Ubap1lG3UW59 384 aa10.14□□□□□ -0.79
Trub1-201ENSMUST00000026072 Calcoco2A2A6M5 331 aa10.14□□□□□ -0.79
Trub1-201ENSMUST00000026072 Nectin2P32507 530 aa10.14□□□□□ -0.79
Trub1-201ENSMUST00000026072 AppP12023 770 aa10.14□□□□□ -0.79
Trub1-201ENSMUST00000026072 Atp6v1dP57746 247 aa10.14□□□□□ -0.79
Trub1-201ENSMUST00000026072 Sf3a1Q8K4Z5 791 aaKnown RBP10.14□□□□□ -0.79
Trub1-201ENSMUST00000026072 KarsQ99MN1 595 aaKnown RBP10.14□□□□□ -0.79
Trub1-201ENSMUST00000026072 Dapk1Q80YE7 1442 aa10.13□□□□□ -0.79
Trub1-201ENSMUST00000026072 RdxP26043 583 aaKnown RBP10.13□□□□□ -0.79
Trub1-201ENSMUST00000026072 Rsph3aQ3UFY4 516 aa10.13□□□□□ -0.79
Trub1-201ENSMUST00000026072 Ralbp1Q62172 648 aa10.13□□□□□ -0.79
Trub1-201ENSMUST00000026072 Rrp12Q6P5B0 1295 aaKnown RBP10.13□□□□□ -0.79
Trub1-201ENSMUST00000026072 Filip1lQ6P6L0 1131 aa10.13□□□□□ -0.79
Trub1-201ENSMUST00000026072 Nutm1Q8BHP2 1126 aa10.13□□□□□ -0.79
Trub1-201ENSMUST00000026072 BccipQ9CWI3 316 aa10.13□□□□□ -0.79
Trub1-201ENSMUST00000026072 Smarce1O54941 411 aaKnown RBP10.13□□□□□ -0.79
Trub1-201ENSMUST00000026072 AqrQ8CFQ3 1481 aaKnown RBP10.12□□□□□ -0.79
Trub1-201ENSMUST00000026072 Gm21190A0A0G2JGJ6 266 aa10.12□□□□□ -0.79
Trub1-201ENSMUST00000026072 Phactr2B1AVP0 632 aa10.12□□□□□ -0.79
Trub1-201ENSMUST00000026072 Pank1Q8K4K6 548 aa10.12□□□□□ -0.79
Trub1-201ENSMUST00000026072 Ylpm1Q9R0I7 1386 aaKnown RBP10.12□□□□□ -0.79
Trub1-201ENSMUST00000026072 Cald1E9QA15 768 aaKnown RBP10.12□□□□□ -0.79
Trub1-201ENSMUST00000026072 Trim30aP15533 496 aa10.12□□□□□ -0.79
Trub1-201ENSMUST00000026072 Gtf3c3Q3TMP1 882 aa10.12□□□□□ -0.79
Trub1-201ENSMUST00000026072 Polr3gQ6NXY9 223 aa10.12□□□□□ -0.79
Trub1-201ENSMUST00000026072 Ccdc30Q8BVF4 654 aa10.12□□□□□ -0.79
Trub1-201ENSMUST00000026072 Sh3bgrQ9WUZ7 214 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms