RNA–Protein interactions for RNA: ENSMUST00000021135.4

Ncbp3-201, Transcript of Nuclear cap-binding protein subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncbp3, Length 12,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp3-201ENSMUST00000021135 Cdkn1cP49919 348 aa11.29□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Cwc22Q8C5N3 908 aaKnown RBP11.28□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Polr3gQ6NXY9 223 aa11.28□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Ccar2Q8VDP4 922 aaKnown RBP11.28□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Hmgn5Q9JL35 406 aa11.28□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Dnai2A2AC93 623 aa11.27□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Nap1l3Q794H2 544 aa11.27□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Plppr3Q7TPB0 716 aa11.27□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Znf692Q3U381 531 aa11.27□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Grwd1Q810D6 446 aaKnown RBP11.27□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Exosc9Q9JHI7 438 aaKnown RBP11.27□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 NaspQ99MD9 773 aaKnown RBP11.26□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Dydc1Q9D9T0 175 aa11.26□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Iqcf3Q9D498 203 aa11.26□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 PdiltQ9DAN1 588 aa11.25□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Gbp4Q61107 620 aa11.25□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Filip1lQ6P6L0 1131 aa11.25□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Phf14Q9D4H9 881 aa11.25□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Kdm2aP59997 1161 aa11.25□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 IqubQ8CDK3 788 aa11.24□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Ccdc83Q9D4V3 305 aa11.24□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Ylpm1Q9R0I7 1386 aaKnown RBP11.24□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 HmmrQ00547 794 aaKnown RBP11.24□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Plcd3Q8K2J0 785 aa11.24□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Arglu1Q3UL36 271 aaKnown RBP11.23□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Srpk2O54781 681 aaKnown RBP11.23□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Rfx1P48377 963 aa11.23□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Speer4f1Q9D5Q6 258 aa11.23□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Anapc15-psA0A140T8L6 141 aa11.23□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Tmx4Q8C0L0 335 aa11.22□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Mia2Q91ZV0 1396 aa11.22□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Kiaa1211Q5PR69 1207 aa11.22□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Trap1aP19473 224 aa11.21□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Cbx1P83917 185 aaKnown RBP11.21□□□□□ -0.61
Ncbp3-201ENSMUST00000021135 Pmfbp1Q9WVQ0 1022 aa11.21□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Nap1l1P28656 391 aaKnown RBP11.2□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Tmco3Q8BH01 678 aa11.2□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Trim30cD3YVI9 513 aa11.2□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Paxip1Q6NZQ4 1056 aa11.2□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Bicd2Q921C5 820 aa11.19□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Brpf1B2RRD7 1212 aa11.19□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Pdia4P08003 638 aaKnown RBP11.19□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Tmco5bQ80X59 307 aa11.19□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Fhad1A6PWD2 1420 aa11.19□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 A0A1L1SQF0 893 aa11.19□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Hook1Q8BIL5 728 aa11.18□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Eif2s2Q99L45 331 aaKnown RBP11.18□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Gm21969J3QJZ1 289 aa11.18□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Kcnj4P52189 445 aa11.18□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Znf330Q922H9 316 aa11.18□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Kri1Q8VDQ9 704 aaKnown RBP11.17□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Erich4Q3UNU4 136 aa11.17□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Vps53Q8CCB4 832 aa11.17□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Dusp27Q148W8 1138 aa11.17□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Rnf214Q8BFU3 668 aaKnown RBP11.17□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Zhx1P70121 873 aa11.16□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Gm42641I6L9G2 585 aa11.16□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Cep112Q5PR68 954 aa11.16□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Spata24Q6P926 205 aa11.16□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 AtripQ8BMG1 785 aa11.16□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 ClasrpQ8CFC7 668 aa11.16□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Krt82Q99M74 516 aa11.16□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Odf2A3KGV1 830 aaKnown RBP11.15□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Ccdc47Q9D024 483 aaKnown RBP11.15□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Gm20521D3Z5F7 333 aa11.15□□□□□ -0.62
Ncbp3-201ENSMUST00000021135 Mroh3A0A1D5RM54 893 aa11.15□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Ccdc181Q80ZU5 509 aa11.14□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Tmem132aQ922P8 1018 aa11.14□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Srek1Q8BZX4 494 aaKnown RBP11.14□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Hdgfl1Q2VPR5 283 aa11.14□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Fez1Q8K0X8 392 aa11.14□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Rec8Q8C5S7 591 aa11.14□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Rnf187Q8BFX1 236 aa11.14□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 CastP51125 788 aa11.13□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Gm35339A0A140LHH9 1649 aa11.13□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Sept6Q9R1T4 434 aa11.13□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Spag5Q7TME2 1165 aa11.13□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Wdr78E9PYY5 807 aa11.13□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Ppm1eQ80TL0 749 aa11.13□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Necab1Q8BG18 352 aa11.12□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Exoc6Q8R313 802 aa11.12□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Frmd3Q8BHD4 595 aa11.12□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Ccdc43Q9CR29 222 aaKnown RBP11.12□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Erlin2Q8BFZ9 340 aa11.11□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Zfp777B9EKF4 885 aa11.11□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Rabep1O35551 862 aa11.11□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Ppfibp2O35711 882 aa11.11□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Usp35M0QWN7 1009 aa11.11□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Rnf20Q5DTM8 973 aa11.11□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Mnat1P51949 309 aa11.11□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Ccdc102aQ3TMW1 549 aa11.11□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 NefhP19246 1090 aa11.11□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Gpatch3Q8BIY1 525 aa11.11□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Ift57Q8BXG3 429 aa11.11□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Trerf1Q8BXJ2 1205 aa11.1□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Paip2Q9D6V8 124 aa11.1□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Zscan21Q07231 555 aa11.1□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Hnrnpul1Q8VDM6 859 aaKnown RBP11.1□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Map9Q3TRR0 646 aa11.1□□□□□ -0.63
Ncbp3-201ENSMUST00000021135 Ankrd24Q80VM7 985 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms